Cavia porcellus (domestic guinea pig): 100722681
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Entry
100722681 CDS
T07777
Symbol
Vcam1
Name
(RefSeq) LOW QUALITY PROTEIN: vascular cell adhesion protein 1
KO
K06527
vascular cell adhesion molecule 1
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc04064
NF-kappa B signaling pathway
cpoc04514
Cell adhesion molecules
cpoc04668
TNF signaling pathway
cpoc04670
Leukocyte transendothelial migration
cpoc04933
AGE-RAGE signaling pathway in diabetic complications
cpoc05143
African trypanosomiasis
cpoc05144
Malaria
cpoc05417
Lipid and atherosclerosis
cpoc05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
100722681 (Vcam1)
04668 TNF signaling pathway
100722681 (Vcam1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100722681 (Vcam1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
100722681 (Vcam1)
09160 Human Diseases
09174 Infectious disease: parasitic
05144 Malaria
100722681 (Vcam1)
05143 African trypanosomiasis
100722681 (Vcam1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100722681 (Vcam1)
05418 Fluid shear stress and atherosclerosis
100722681 (Vcam1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
100722681 (Vcam1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpoc04515
]
100722681 (Vcam1)
04090 CD molecules [BR:
cpoc04090
]
100722681 (Vcam1)
04091 Lectins [BR:
cpoc04091
]
100722681 (Vcam1)
Cell adhesion molecules [BR:
cpoc04515
]
Immunoglobulin superfamily
VCAM
100722681 (Vcam1)
CD molecules [BR:
cpoc04090
]
Proteins
100722681 (Vcam1)
Lectins [BR:
cpoc04091
]
I-type lectins (Siglecs)
100722681 (Vcam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
C2-set
Ig_2
V-set
C2-set_2
ICAM_N
Ig_4
Ig_6
Ig_5
ICAM1_3_5_D2
Lep_receptor_Ig
C1-set
Motif
Other DBs
NCBI-GeneID:
100722681
NCBI-ProteinID:
XP_003479223
Ensembl:
ENSCPOG00000006727
LinkDB
All DBs
Position
Unknown
AA seq
742 aa
AA seq
DB search
MPGKMAMIFGASNILWIVFAASQAFKIETSPESRTLVQIGDSVSLMCSTTGCEAPSFSWR
TQIDSPLNAKVRNEGTKSTLTMDPVSFENEHSYLCTATCGSKKEEKEIKVDVYSFPKDPE
IQLSGFPEVGNPXTVKCVVPDVYPFDRLEVELLKGDSRMKHQEFLEDMERKSLETKSLEV
AFTPTLEDTGKALVCRAQLHMFETDSEEASPKERETYRELQVYILPKNTAIHVHPSTSLQ
EGDSVTMTCSSEGLPAPEIFWNKKLDNGDLQLLSGNATLTLIAMKVEDSGIYVCQGVNVI
GANGKEIELIVKEKPFTVDISPGHQVATQIGDSVVLRCSVTGCETPSFSWRTQRDSPLNG
IVSSDRTESTVTLTSVSLENEDHYLCTVTCGRRKMEKEVQMKVYSFPQDPEIEMSGLLVS
GTPVTISCKVPLVYPSGHLEIEIHKGETLMVNKHFLEEMNIKSLENKSLEVTFTPTSEDT
GKVLVCQAKLHIGEVESEPKQRQSTQTLYVNVAPTDTTVSVNPSAVLEEGSSVNMTCTTR
GLPSPKILWSRQLSNGDLQPLSENTTLTLISTKMEDSGIYVCEGINEAGRSRKEVELIIQ
VAPKDIQLTAFPSESVKEGDMVIISCTCGNVPETWIILKKKTEMGDTVLKSIDGAYTIHK
VQLEDAGVYECESKNKVGSELRSLTLDVKGRENNKDYFSPELLVLYCISFLIIPAIGMII
YFARKANMKGSYSLVDAQKSKV
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggaagatggccatgatctttggagcctcgaatatactttggatagtgtttgca
gcctctcaggcttttaaaattgaaacctctccggaatccaggactcttgttcagataggt
gactcggtctcgctgatgtgcagtaccacaggctgcgaggccccatctttctcgtggaga
acccagatagacagccccctgaatgccaaggttaggaatgaagggaccaagtccacgctg
accatggatccagtgagtttcgagaacgaacactcctatctgtgcacagcaacttgtgga
tccaagaaagaggaaaaagaaataaaagtggacgtctactctttccctaaggatccagag
attcaactgagtggctttccggaggttggaaaccctnncacagtcaagtgtgtggtccct
gatgtgtacccatttgacaggctagaggtggagttactgaaaggtgactctcgtatgaag
catcaggaatttctggaagatatggagagaaagtccctggaaaccaagagtcttgaagta
gcctttactcctacccttgaggatactggaaaagcacttgtttgccgagcacaattacac
atgtttgaaaccgattctgaagaagcaagtcccaaagaaagggagacttacagagagcta
caagtctacatcctacccaagaacacagctatacatgtgcatccttccaccagtctgcaa
gagggagactctgtgactatgacatgctccagtgagggtttgccagctcctgagattttc
tggaacaagaaactagataatggggatctacagcttctttcagggaatgcaactcttaca
ttaattgccatgaaagtggaagattctggaatttatgtttgccaaggagtcaatgtgatt
ggggcaaacggaaaagagattgaattaattgttaaagaaaaaccatttactgtggacatc
tcccctggacaccaggttgccactcagattggggactcggttgtattgagatgtagtgtc
acaggttgtgagaccccatctttctcttggagaacccagagagacagccctctgaatggg
atagtgagcagtgacaggaccgagtccacggtgaccttgacctctgtgagtttagagaac
gaagatcattacctgtgtactgtgacgtgtggacgcaggaaaatggaaaaggaggtccaa
atgaaagtctactctttccctcaagatccagaaatcgaaatgagcggtctactagtgagt
gggacccctgtcaccataagctgcaaggttcctcttgtgtacccttctggtcacttggag
attgaaatacataaaggggaaactcttatggtgaataaacactttttggaggaaatgaac
ataaaatccctagagaacaaaagtttggaagtgaccttcacccccacctctgaagatact
ggaaaagttcttgtttgtcaggctaagttacatattggtgaagtggaatctgaacccaaa
caaaggcagagtacacagacactttatgtcaatgttgcccccacagataccactgtctcg
gtcaacccctctgctgtcttagaggaaggaagttctgtgaatatgacatgcactacccgt
ggccttccatcaccaaaaattctgtggagcagacagctcagtaatggagatctacaacct
ctttctgagaataccaccctcaccttaatttctacaaaaatggaagattctggcatttat
gtgtgtgaggggattaatgaggctggaagaagcagaaaagaagttgaactaattatccaa
gttgctccaaaagacattcagcttacagcttttccttctgagagtgtgaaggaaggagac
atggtcattatctcttgtacatgtggaaatgttccagaaacttggataatcctgaagaaa
aaaacagagatgggagacacagtgctaaagtctatagatggtgcatacaccatccacaag
gtgcagttggaggacgcaggagtgtatgaatgtgaatctaaaaataaagttggttcagaa
ttaagaagtctaacgctggacgttaaaggaagagaaaataacaaggactacttttctccc
gaacttcttgttctctactgtatatccttcttaataatacctgccattgggatgatcatt
tactttgcaagaaaagccaacatgaaaggttcatacagtcttgtagacgcacagaaatca
aaagtgtaa
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