KEGG   Cavia porcellus (domestic guinea pig): 100722832
Entry
100722832         CDS       T07777                                 
Symbol
Lta
Name
(RefSeq) lymphotoxin-alpha
  KO
K05468  lymphotoxin alpha (TNF superfamily, member 1)
Organism
cpoc  Cavia porcellus (domestic guinea pig)
Pathway
cpoc04060  Cytokine-cytokine receptor interaction
cpoc04061  Viral protein interaction with cytokine and cytokine receptor
cpoc04064  NF-kappa B signaling pathway
cpoc04668  TNF signaling pathway
cpoc04940  Type I diabetes mellitus
cpoc05166  Human T-cell leukemia virus 1 infection
cpoc05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cpoc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    100722832 (Lta)
   04668 TNF signaling pathway
    100722832 (Lta)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    100722832 (Lta)
   04061 Viral protein interaction with cytokine and cytokine receptor
    100722832 (Lta)
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    100722832 (Lta)
   05168 Herpes simplex virus 1 infection
    100722832 (Lta)
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    100722832 (Lta)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:cpoc04052]
    100722832 (Lta)
Cytokines and neuropeptides [BR:cpoc04052]
 Cytokines
  Tumor necrosis fators
   100722832 (Lta)
SSDB
Motif
Pfam: TNF
Other DBs
NCBI-GeneID: 100722832
NCBI-ProteinID: XP_003474031
Ensembl: ENSCPOG00000035260
UniProt: H0UYC1
LinkDB
Position
Unknown
AA seq 197 aa
MSSPGGLYLPRVPGAPLLFLLGLLLALQWPGAQGLPGVSLAPSAVQTARRHLGYGSLKPA
AHLIGDPRSKNWLRWRANSDQGFLLNGFSLSNNSLLVPASGLYFVYSQVVFSGHSYSPKP
LYLSHEVHVLTSRYSFQLPLLSAHKNVDPGLEGHWMRSMYQGAVFLLTKGDQLSTQTEGI
PYLFVSPSSVFFGAFAL
NT seq 594 nt   +upstreamnt  +downstreamnt
atgtcatcacctggaggcctctacctcccgagggtgcctggtgcccccctcctcttcctc
ctggggctgctgctggctctgcagtggcctggggcccagggactccccggtgtcagcctg
gcaccctcagctgtccagactgcccggagacatttgggctatggctccctcaaacctgct
gctcacctcatcggagaccccagatcgaagaactggctgcgctggagagcgaactcggac
cagggcttcctcctcaatggcttctctttgagcaacaattccctcctggtccccgccagt
ggcctgtactttgtctactcgcaggtggttttctcagggcacagctactcgcccaaaccg
ctctacctgagccacgaggtccacgtcttgacctccaggtactccttccaactgcccctg
ctcagcgcccacaagaacgtggacccgggcctggagggtcactggatgcgctccatgtac
cagggcgccgtgttcctgctcacgaagggagaccagctgtccacccaaacagaaggcatc
ccctacctcttcgtcagccccagcagcgtcttctttggggcctttgctctgtag

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