Cavia porcellus (domestic guinea pig): 100722976
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Entry
100722976 CDS
T07777
Symbol
Syvn1
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc04120
Ubiquitin mediated proteolysis
cpoc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100722976 (Syvn1)
04120 Ubiquitin mediated proteolysis
100722976 (Syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpoc04121
]
100722976 (Syvn1)
Enzymes [BR:
cpoc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100722976 (Syvn1)
Ubiquitin system [BR:
cpoc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100722976 (Syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
zf-HC5HC2H
zf-C3H2C3
Endonuclease_7
zf-Nse
Motif
Other DBs
NCBI-GeneID:
100722976
NCBI-ProteinID:
XP_005003028
Ensembl:
ENSCPOG00000022104
LinkDB
All DBs
Position
Unknown
AA seq
606 aa
AA seq
DB search
MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
SAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQSPPPPEPADQGPPPAPHPP
PLMPQPPNFPQGLLPPFPPGMFPLWPPVAPFPPVPPPPSSGEAAAPPSTSAALSRPSGTA
TTTPAXTSASAPAPEAAPASGFPFPPPWMGMPLPPPFAFPPMPVPPAGFAGLTPEELRAL
EGHEQQHLEARLQSLRNIHTLLDAAMLQINQYLTVLASLGPPRPATSVGPMEETGSTAVP
AAASTSTPSSEATTPSPGASSPAQETEKPPAPESVGAEELPEDDGEPDAAELRRRRLQKL
KSPVNH
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcaccgcagtgatgatggcggctagcctggcgctgaccggggccgtggtagct
catgcctactacctcaaacaccagttttaccccacggtggtgtacttgaccaagtccagc
cccagcatggcagtcctgtacatccaggcctttgtccttgtcttcctcttgggcaaggtg
atgggcaaggtgttctttgggcagctgagagcagcagagatggagcatcttttggaacgt
tcctggtatgctgtcaccgagacatgtctggccttcactgtttttcgggatgacttcagc
ccccgctttgttgcgctcttcactctcctcctcttcctcaagtgtttccactggctggct
gaggaccgtgtggactttatggaacgcagccccaatatctcttggctctttcactgccgc
atcgtctcccttatgttcctcctgggtatcctggacttcctcttcgtcagccatgcctat
cacagcatcctgacccgtggggcctctgtgcagctggtgtttggctttgagtatgccatc
ctgatgaccatggtgctcaccatcttcatcaagtatgtgctgcactctgtggacctccag
agcgagaacccctgggacaacaaggccgtgtacatgctctacacagagctgttcacaggc
ttcatcaaggtcctgctgtacatggccttcatgaccatcatgatcaaggtgcacaccttc
ccgctcttcgccatccggcccatgtacctggccatgaggcagttcaagaaagctgtgaca
gatgccatcatgtcacgccgggccatccgcaacatgaacacactgtacccagacgccacc
cccgaggagctgcaggcaatggacaatgtctgtatcatctgccgagaagagatggtgacc
agcgccaagagactgccctgcaaccacatcttccacaccagctgcctgcgctcctggttc
cagaggcagcagacctgccctacctgccgtatggatgtcctgcgggcatcactgccagcc
caatcaccaccaccccctgagcccgcggatcaggggccaccccctgccccacacccccca
ccactcatgccccagccccctaacttcccccagggcctcctgcctccttttcctccaggc
atgttccccctgtggccccctgtggcccccttcccacctgtcccacctcccccaagctca
ggagaggctgcagcaccaccatccaccagtgcagccctctctaggccaagtggaacagcc
acaactacacctgctngcaccagtgcctctgccccagccccagaggctgcccctgcctca
ggcttccccttcccacccccctggatgggcatgcccctgcctccaccctttgcattcccc
cctatgcctgtgccccctgcgggcttcgctgggttgaccccagaggagcttcgggcgctg
gaaggccatgagcagcagcacctagaggcccggctgcagagccttcgcaacatccacaca
ctgctggacgccgccatgctgcagatcaaccagtacctcactgtgctggcctccttgggg
ccccctcgccctgccacttcagtcggtcccatggaagagactggctccacagcggtccct
gccgccgcctctaccagcacccccagctctgaggccactaccccatccccaggagcctcc
tcaccagcccaggaaactgagaaacctccagctccagagtcggtgggtgctgaggagcta
cctgaggacgacggagagccagatgctgcagagctccgccggcgccgcctgcagaaactc
aagtcccctgttaaccactga
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