Cavia porcellus (domestic guinea pig): 100723138
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Entry
100723138 CDS
T07777
Symbol
Smc1a
Name
(RefSeq) LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 1A
KO
K06636
structural maintenance of chromosome 1
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc04110
Cell cycle
cpoc04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100723138 (Smc1a)
04114 Oocyte meiosis
100723138 (Smc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpoc03036
]
100723138 (Smc1a)
Chromosome and associated proteins [BR:
cpoc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
100723138 (Smc1a)
Meiosis-specific proteins
Cohesin complex and associated proteins
100723138 (Smc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_15
AAA_29
AAA_21
ABC_tran
Mce4_CUP1
Motif
Other DBs
NCBI-GeneID:
100723138
NCBI-ProteinID:
XP_003462393
Ensembl:
ENSCPOG00000009577
LinkDB
All DBs
Position
Unknown
AA seq
1235 aa
AA seq
DB search
MGFLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT
LRDLIHGAPVGKPAANRAFVSMVYSEEGAEDRTFARVIVGGSSEYKINNKVVQLHEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNK
ELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQS
QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKLREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQV
MEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRY
EPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKERLTEELKEQVKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEF
CREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQ
TVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGG
ANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGSSQGE
DSVSGSQRTSNIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQKLNEQQSVLQRI
AAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATN
IDEIYKALSRNSSAQAFLGPEKAEEPYLDGINYNCSLVNWRGKLAFDVPPCLVAHFLGIS
FMYWFPSSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAE
SLIGVYPEQGDCVISKVLTFDLTKYPDANPNPNEQ
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcctgaaattgattgagatcgagaactttaaatcgtacaagggtcgacagatt
atcggaccatttcagagattcactgccatcattggacccaatggctctggtaagtcaaat
ctcatggatgctatcagctttgtgttaggtgaaaaaaccagcaaccttcgggtaaagacc
ttgcgggacctaatccacggagctcctgtgggcaagccagctgctaaccgagcctttgtc
agcatggtctactctgaggagggtgctgaagaccgaacctttgcccgtgtcattgtaggt
ggttcctctgagtacaagatcaacaacaaagtggtccagctacatgagtacagtgaggaa
ttagaaaagttgggcattctcatcaaagctcgtaacttcctcgtcttccagggtgctgtg
gaatctattgccatgaagaaccccaaagagaggacggctctgtttgaagagatcagtcgt
tctggggagctggcccaggagtatgataagcgaaagaaggaaatggtgaaggcagaagaa
gacacacaatttaattatcatcgtaagaaaaacatagcagctgaacgcaaggaggctaaa
caagagaaggaagaggcagaccgctatcagcgcctaaaagatgaggtggtgcgagctcag
gtacagctgcagctctttaagctttaccataatgaagtggaaattgagaaactcaataag
gaactagcctcaaagaacaaggagattgagaaggacaagaagcgtatggacaaggttgaa
gatgagctaaaagagaagaagaaggagctgggcaaaatgatgcgggagcaacagcagatt
gaaaaggagataaaggagaaagactcagagctgaatcagaagcggcctcaatacattaaa
gccaaagagaatacttcccacaaaatcaagaaattagaagcagccaagaagtctctgcag
aatgctcagaaacactacaagaaacgtaaaggtgacatggatgagctggaaaaagaaatg
ctgtcagtggaaaaggctcggcaggagttcgaagaacgaatggaagaggagagtcagagt
caaggcagagatttgaccctagaggagaatcaggtgaagaaataccaccggttgaaagaa
gaagccagcaagagagcagccactttggcccaggaactagagaagttcaatcgagaccag
aaagctgaccaggaccgtctggatctggaagagcggaagaaagtagaaacagaggccaag
atcaagcaaaagctgcgggagattgaagagaatcagaagcggattgaaaagctggaggaa
tatatcaccactagcaagcagtccctagaagagcagaagaagctagagggagagctgaca
gaggaggtggagatggccaagcggcggatcgatgagatcaataaggaactgaaccaggtg
atggagcagttgggggatgcccgcattgatcgccaggagagtagccgccagcagcgaaag
gcagagataatggaaagcatcaagcgtctttaccccggctctgtgtatggccgcctcatt
gacctctgccagcccacgcaaaagaagtatcagattgctgtgaccaaggttttgggcaag
aacatggatgccattattgtagactcagagaagacaggacgggattgcattcagtatatc
aaggagcagcgtggggagcctgagacctttttgcctcttgactacctggaggtaaaacct
acagatgagaaacttcgggagctgaagggggccaagctagtgattgatgtgattcgctat
gagccacctcacattaaaaaagctctgcagtatgcttgtggcaatgcccttgtctgtgat
aacgtggaagatgctcgccgcatcgcctttggagggcatcagcgtcacaagacagtggca
ctggacgggaccctgttccagaagtcaggagtcatctctggtggagccagtgacttgaag
gccaaagcacggcgctgggatgaaaaagcagtagacaagttgaaagagaaaaaggagcgg
ttgacagaagaactaaaagagcaggtgaaggccaaaaggaaagaggcagaactgcgtcag
gtgcagtctcaagcccatggactacagatgcggctcaaatactcacagagtgacctagaa
cagaccaagacaagacatctggcactgaatctccaggaaaagtccaagctggagagtgag
ttggccaacttcggaccacgaattaatgatatcaagcgaatcatccaaagccgagagagg
gaaatgaaagacttaaaggagaagatgaatcaggtggaggatgaggtgtttgaagagttt
tgccgggagattggtgtacgcaatatccgagaatttgaagaagaaaaggtgaagcggcaa
aatgaaattgcaaagaagcgtttggagtttgagaatcagaagactcgcttgggcatccag
ttggattttgagaagaaccaactgaaggaggaccaggataaagtacatatgtgggagcag
acagtgaaaaaggatgaaaatgagatagaaaagctcaagaaggaggagcaaagacacatg
aagatcatagatgagaccatggcccagctacaagatctgaagaatcagcacctggccaag
aagtcagaagtaaatgacaagaatcacgagatggaggagattcgtaagaaactaggaggt
gccaacaaggaaatgacccatttacagaaggaggtgacagctattgaaactaaacttgaa
cagaaacgcagtgaccgccacaacttgctacaggcgtgcaagatgcaggacatcaagttg
ccactctcgaagggcaccatggatgatattagtcaggaagagggtagctctcagggagag
gattcagtgagtggttcccagagaacttccaatatctatgcacgagaggccctcattgag
attgattatggtgacctttgtgaggatctcaaggatgcccaggctgaggaggagattaaa
caggagatgaacacactgcagcagaagctaaatgagcagcaaagtgtgcttcagcgtatt
gctgcccccaacatgaaggccatggaaaagctggaaagtgtcagagacaagttccaggaa
acctcagatgagtttgaggcagcccgaaaacgagcaaagaaggccaagcaagcgtttgaa
cagattaagaaggagcgctttgatcgttttaatgcttgttttgaatctgtggctaccaac
attgatgaaatctataaggctctgtcccgcaacagcagtgcccaggcattcttgggccct
gaaaaggcggaggaaccctacttagatggcatcaactataactgttctcttgtgaactgg
agaggaaagctagcatttgatgtcccaccctgccttgttgcccatttccttggtatcagc
tttatgtactggttcccttccagctacaagccagcccccttctttgtcctggatgaaatt
gatgctgccttggataataccaacattggcaaggtggcgaattatatcaaagagcagtcg
acttgcaacttccaggccattgtcatctctctcaaggaggagttctacaccaaggcggag
agcctcattggagtctatcctgagcaaggggactgtgtgataagcaaagtcctgaccttc
gacctcaccaagtacccagatgccaacccaaaccccaatgaacagtag
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integrated database retrieval system
