Cavia porcellus (domestic guinea pig): 100723407
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Entry
100723407 CDS
T07777
Symbol
Col9a1
Name
(RefSeq) collagen alpha-1(IX) chain isoform X1
KO
K08131
collagen type IX alpha
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc04151
PI3K-Akt signaling pathway
cpoc04510
Focal adhesion
cpoc04512
ECM-receptor interaction
cpoc04518
Integrin signaling
cpoc04820
Cytoskeleton in muscle cells
cpoc04974
Protein digestion and absorption
cpoc05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100723407 (Col9a1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100723407 (Col9a1)
04518 Integrin signaling
100723407 (Col9a1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100723407 (Col9a1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100723407 (Col9a1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100723407 (Col9a1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
100723407 (Col9a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cpoc00535
]
100723407 (Col9a1)
Proteoglycans [BR:
cpoc00535
]
Extracellular matrix (ECM) proteoglycans
Others
100723407 (Col9a1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
100723407
NCBI-ProteinID:
XP_012997698
Ensembl:
ENSCPOG00000005651
LinkDB
All DBs
Position
Unknown
AA seq
783 aa
AA seq
DB search
MSGSTLEKNWSIWQIQNSLGKEQVGVKINGQTKSVAFSYKGLDGNLQTAAFSNLPSLFDS
QWHKLMISVERSSATLFVDCNKIESLPIKPRGPIDVNGFAVLGKLAESPQVSVPFELQWM
LIHCDPLRPTRETCHELPVRTPPTRTTDEQRGPPGEQGPPGPPGPPGVPGIDGIDGDRGP
KGPPGPPGLTGPDGSPGSVGPRGQKGEPGVPGSRGFPGRGIPGPPGPPGTAGLPGELGRV
GPIGDPGRRGPPGPPGPPGPSGTIGFHDGDPLCPNACPPARSGYPGLPGMRGHKGAKGEI
GEPGRQGHKGEEGDQGEPGEAGVQGPPGAQGLRGITGITGEKGEKGARGLDGEPGPQGLP
GAPGDQGQRGPPGEAGPKGDRGPQGSRGIPGVPGPKGDTGLPGVDGRDGIPGMPGTKGEP
GKPGPPGDAGLQGLPGVPGIPGAKGVSGEKGNTGAPGKPGQLGNSGKPGHQGPPGEVGPR
GPRGLPGSRGEIGPVGSPGIPGKLGPHGSPGLPGLPGPPGLPGMKGDRGILGEPGPKGEQ
GASGEEGEAGGRGDLGDTGLPGPKGSMGNPGEPGLRGPEGIRGLPGVEGPRGPPGPRGVQ
GEQGATGLPGAQGPPGRAPTDQHIKQVCMRVMQEHFAEMAASLKRPDSGASGLPGRPGPP
GPPGPPGENGFPGQMGIRGLPGVKGPPGALGLKGPKGEMGEKGERGPPGRGPKGLPGATG
LPGDPGPASYGRNGRDGERGPPGVAGIPGVPGPPGPPGPPGFCEPASCTLQAGQRAFSKG
PDQ
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaagcacgcttgaaaagaactggagcatttggcagattcagaattccttgggg
aaggagcaagttggtgtgaagatcaatggccaaacaaagtccgttgcattttcctacaag
ggactggatggaaatctccaaactgcagccttttcaaatttgccttccttgtttgattcc
cagtggcataagctcatgatcagcgtggaaaggagcagtgccactctttttgttgactgc
aacaaaatcgagtctttacctataaagccaagaggccccatcgatgttaatggctttgct
gtacttggaaagcttgcagaaagtcctcaagtttctgttccatttgaactccagtggatg
ctgatccattgtgaccctctgaggccgaccagagaaacgtgccatgagctgccagtcaga
acaccacccacccggactaccgacgagcagagaggccctccaggagagcaggggccccct
gggccccccggacccccaggcgttccagggatcgacggcatcgacggcgaccgaggtccc
aaaggtcccccgggtcccccgggattaacaggacctgatggatctcctggctctgttgga
ccaagggggcaaaaaggagaacctggtgtgcctggatcacgtggatttccaggccgtggt
attcctgggccccctggtcctcctgggacagcaggactccctggagagcttggccgtgta
ggacctattggtgaccctgggagaagaggaccgcctggcccccctgggccaccgggcccc
agtggcacaattggctttcatgatggagatccactgtgccccaacgcctgcccaccagca
cgctccggatacccaggcctacccggcatgcggggtcataaaggggctaaaggagaaatt
ggtgaaccaggaagacaaggacacaagggtgaagaaggtgaccagggagaaccaggagaa
gctggcgttcaaggacctccaggagctcaaggtttgagaggcatcactggcataactgga
gaaaaaggagaaaaaggtgctcggggcttagatggagaacctggacctcagggtcttcct
ggtgcacctggtgatcaaggacagcgaggacctccaggagaagcaggtcccaagggagac
agaggtcctcaaggttctagaggaattcctggagtccctgggcccaaaggagacacgggc
ttgccaggagtggatggccgagatgggatacctggaatgcctggaacaaagggtgaacca
gggaaacctgggcctcctggagacgcagggttacaggggttaccaggtgtccctggaatt
cctggtgcaaagggtgtttctggtgaaaagggtaacacaggagccccagggaagcctggt
caactgggaaattcaggcaaaccgggccaccaggggcctccaggagaggtgggcccacga
ggaccccgggggcttcctggcagtagaggagaaataggaccagtaggatccccaggcata
ccaggtaaactgggacctcatggtagccctggcctccctggcttgcctggacctcctggg
cttcctggaatgaaaggtgacaggggtatactgggtgaaccgggtccaaagggtgaacag
ggtgcctctggtgaagaaggtgaagcaggaggaaggggtgatcttggagatacaggatta
cctggcccaaaaggatctatgggtaaccctggggagcctggcttgagagggcctgaagga
attcgagggctgcctggggtggaaggaccgagaggaccacctggaccccgcggtgtgcag
ggggagcagggtgccaccgggctacctggtgcccagggccctccgggcagagcgccgaca
gatcagcacattaagcaggtttgcatgagggtcatgcaagagcactttgctgagatggct
gctagtctcaagcgtccagactccggtgcctctggtctccctggcaggcctggtccccct
ggacctcctggtccccctggagagaatggtttcccaggtcagatgggaattcgtggcctc
ccaggcgttaagggtccccctggcgctcttggtttgaagggacctaaaggtgagatgggt
gaaaaaggggagcgtggcccaccaggaagaggtcccaaaggtctgcctggagcgacaggt
ctcccaggtgacccaggccctgccagctatgggagaaacggccgtgatggggagcgaggg
ccccccggagtggcaggaattcctggtgtacctggtcccccagggcctcctggtcctcct
ggattctgtgagccggcttcctgtaccctgcaggctggtcagcgagcttttagtaaaggc
cctgaccagtga
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integrated database retrieval system
