Cavia porcellus (domestic guinea pig): 100723518
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Entry
100723518 CDS
T07777
Symbol
Polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100723518 (Polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpoc03021
]
100723518 (Polr1b)
Enzymes [BR:
cpoc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
100723518 (Polr1b)
Transcription machinery [BR:
cpoc03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
100723518 (Polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
100723518
NCBI-ProteinID:
XP_003465107
Ensembl:
ENSCPOG00000015744
UniProt:
H0VU26
LinkDB
All DBs
Position
Unknown
AA seq
1135 aa
AA seq
DB search
MDPSGRWRNLPSGPSLKHLTDPSYRIPRAQQKAALQELTRAHVDSFNYAVCEGLSQAVQA
IPSFEFAFKDERISLTIVDAVISPPTVPKGTICREPNVYPAECRGRKSTYRGRLTVDISW
SVNGISRGVIKQFLGYVPIMVKSKLCNLHNLPPKALIEHHEEAEEMGGYFIINGIEKVIR
MLIMPRRNFPIALVRPKWKSRGPGYTQFGVSIHCVRGDHSAVNMNLHYLENGTVMLNFIY
RKELFFLPLGFALKALVSFSDYQIFQELIKGKEEDSFFRNSVSQMLRIVMEEGGSTQKQV
LNYLGECFRIKLSLPDWYSNEQAAEFLFNQCICIHLKSNTEKFHLLCFMTRKLFALAKGE
CLEENPDSLVNQEILTPGQLFLMFLKEKMEAWLVSVKIALDKRAQKTNVSINTENLMKIF
SMGGDLTRPFEYLLATGNLRSKTGLGFMQDSGLCVVADKLNFIRYLSHFRCVHRGGDFAK
MRTTTVRRLLPESWGFLCPVNTPDGAPCGLMNHLTAICEVVTQFAYTTSIPALLCSLGVT
PVDGAPHRPYSECYPVLLDGVMVGWVDKELAPGVADSLRRFKVLREKRIPPWMEVALIPI
TGKPSLYPGLFLFTTPCRLVRPVQNLELGREELIGTMEQLFMNIAILEDEVCAGITTHQE
LFPHSLLSVIANFIPFSDHNQSPRNMYQCQMSKQTMGFPLLTYQDRSDNKLYRLQTPQSP
LVRPYMYDYYDMDNYPIGTNAIVAVISYTGYDMEDAMIVNKASWERGFAHGSVYKTEFIN
LSEKIKQGDDSLVFGVKPGDPRVMQKLDDDGLPFIGAKLQYGDPYYGYLNLNTGESYVMY
YKSKENCIVDNIKVCSNESGSGKFKCICITMRVPRNPTIGDKFASRHGQKGILSRLWPAE
DMPFTESGMMPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFIFSEENSASE
YFGEMLKAAGYNFYGTERLYSGISGVELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDK
VTNQPIGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVECGSLLSPL
LEKPPPSWSAMRNRKYNCTVCNRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDVI
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggatcccagcggccgctggcggaacctacccagcgggcctagcctaaagcatctgacc
gacccttcgtaccggatcccgcgggcgcaacagaaggcggcgctgcaagagctgacgcgg
gcgcatgtggactccttcaactacgccgtgtgcgaggggctcagccaagctgtgcaggct
attccttcctttgagtttgctttcaaagatgagcgaatctctctcactattgtggatgct
gtcatcagtcctcccacggttcccaaagggaccatctgcagagagcccaatgtttaccca
gcagaatgccgaggtcgcaagagcacgtaccgggggaggctgacggtcgatatcagctgg
tcagtaaatggaatctccagaggggtcattaaacagtttcttggctatgtgcccatcatg
gtgaagtccaagctttgcaacttgcacaaccttcctccaaaagccctcattgaacaccac
gaggaggccgaggaaatgggaggatattttataatcaatggtattgaaaaggtcatccga
atgctaattatgcctcggaggaatttccccattgctttggtaagaccaaagtggaaaagc
agagggcctggctatactcagtttggggtttctatacactgcgtacggggagaccattct
gccgtgaatatgaaccttcactatttggaaaatggcacagttatgttaaacttcatttac
cggaaagaattattttttcttcctttgggatttgcacttaaggctctggtcagcttctct
gattatcagatttttcaggagctcatcaagggaaaagaggaagactccttctttaggaac
tctgtttcccagatgctgaggattgtaatggaagagggcggttccacccagaaacaggtc
cttaactatctgggcgaatgcttccgaatcaagctcagtcttcccgactggtactcaaat
gaacaagctgcagagttcctgtttaaccagtgtatctgcatccacctgaaatccaatact
gaaaagtttcacttgctttgtttcatgacccggaagctctttgctttagccaaaggagag
tgtctggaggagaatcctgatagtttagtgaatcaagaaatcctcactcccggtcagctc
ttccttatgtttctgaaggaaaaaatggaagcttggttagtgtctgttaaaatagcatta
gataaaagggctcagaagaccaatgtatccataaacactgaaaatttgatgaagattttt
agtatgggaggagacctgacaagaccttttgaatatcttcttgctactgggaatctgcgt
tcgaaaacaggtcttggcttcatgcaagattctggactttgtgttgtggctgacaagctg
aacttcattcgctatctctcccatttccgctgtgtgcacagaggaggtgattttgccaag
atgaggaccaccacagtgcgtaggctgctgccagagtcctggggcttcctttgtcccgtg
aacaccccagatggggcgccctgtgggctaatgaaccacttaactgccatatgtgaggtc
gtcacgcagtttgcgtatacaacgtctattccagctttgctctgcagcttgggggtcaca
cctgtcgatggagcaccacatcgaccgtacagcgagtgctaccctgtcctactggatggt
gtcatggtgggctgggtggacaaggagctggctcctggcgtcgcagattctctccggcgt
tttaaggtgttaagagaaaaaagaattcctccctggatggaagtggctcttatcccgatc
acaggaaaaccaagcctgtatccaggactgttcctttttaccactccttgcagactggtg
cggcctgtgcagaacttggaattaggcagagaagaactgattggcaccatggaacagctc
ttcatgaacatcgccatcttagaggatgaggtttgtgccggtatcaccacgcaccaggag
ctcttcccacacagcctgctgagtgtgatcgccaactttatccccttctctgatcacaac
cagagtccgcggaacatgtaccagtgccagatgagtaagcagaccatgggctttcccctc
ctcacataccaggaccgatcagataacaagctctatcggctccagactccacagagtccc
ttagtgaggccatacatgtatgactactatgacatggataactatccaattgggacaaat
gccattgttgctgtgatttcatacactggctatgacatggaagatgccatgattgtgaat
aaggcttcttgggaacgtggctttgcccacggaagcgtctataagacagagttcataaac
ctctctgaaaaaattaagcaaggagatgatagtctggtgtttggagtcaaacctggcgac
ccgcgcgtcatgcagaagttagatgatgatgggctgccgtttataggcgcaaagctgcag
tacggagacccatactacggctacctaaatctcaacaccggggagagctacgtgatgtac
tataagagtaaagaaaattgtattgtggacaacattaaagtatgcagtaacgaatctggg
agtggaaaattcaagtgtatttgcatcacaatgagagtccctcggaacccaaccatcgga
gacaaatttgccagtcggcacgggcagaagggcattttgagcagactgtggcccgctgag
gacatgcctttcaccgagagtgggatgatgccggacattctgttcaatcctcatggtttt
ccgtctcgaatgaccatcggtatgttaattgagagcatggctggcaagtctgcagctttg
catggtctctgccatgacgccacacccttcatcttctccgaggagaactcagcctcggaa
tacttcggagagatgttaaaggccgctggctacaacttctatggcaccgagaggttgtat
agcggcatcagtggggtggaactagaagcagacatattcataggcgttgtttattaccaa
cgcttacggcacatggtatcagacaaatttcaagttagaacaactggagccagggacaag
gtcaccaaccagcctattggaggaagaaacgtccagggaggaatccgttttggggagatg
gaacgggatgctcttttggctcatggtacatcttttctgcttcacgaccgcctcttcaat
tgctctgaccgctcggtggcacatgtgtgtgtggagtgcggcagtttactctccccgctg
ctagagaagccacccccttcttggtctgccatgcgaaacagaaaatacaactgcacggtt
tgtaaccgcagcgacaccatcgatactgtctctgtgccttacgtgttccgatattttgtg
gctgaactggcagctatgaacatcaaagtgaaactggatgtcatttaa
DBGET
integrated database retrieval system
