KEGG   Cavia porcellus (domestic guinea pig): 100724055
Entry
100724055         CDS       T07777                                 
Symbol
Col23a1
Name
(RefSeq) collagen alpha-1(XXIII) chain
  KO
K24355  collagen type XXIII alpha
Organism
cpoc  Cavia porcellus (domestic guinea pig)
Pathway
cpoc04974  Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:cpoc00001]
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    100724055 (Col23a1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:cpoc00536]
    100724055 (Col23a1)
Glycosaminoglycan binding proteins [BR:cpoc00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   100724055 (Col23a1)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 100724055
NCBI-ProteinID: XP_013010474
LinkDB
Position
Unknown
AA seq 440 aa
MAFPRLSPGFVSRDHRAYSLRVLKGEQGEDGAAGPPGPPGPPGARGPPGDTGKDGPRAAQ
GPAGPKGEPGQHGEVVSIPDLAAPFPRRPGLEEGPKGPPGPQGEPGTPGEKGEDGMPSQP
GLPGPPGPKGEPGSAGPQGQDGVDGAPGPKGEPGPRGTEGAAGPRGAPGLKGEQGDTVVI
DYDGRILDALKGPPGPQGAPGPPGIPGAKVSGDAATWSLGPGTHPPSPLSQVPSPHISSA
SSLSAGGPLLAKQVPSAGPWLLPTAHPEKTPSYLPDVLPGTPGWTSMCMCTASTLAMPAW
YTLPLALDLEVRQGLVLASLSLGSGPGTSASSAVTSQPEGDSLVLQLPPKLSKYRTPCWK
SPRHQGSCPGSQRTERRLRRAGANRTQGRSGRDGLTRPSGPDHSRTRATRPPRASWPHGP
PGHPGSQGLGWSKGREGRVG
NT seq 1323 nt   +upstreamnt  +downstreamnt
atggccttcccccggctcagccccggctttgtgagcagagaccatcgcgcatacagcctc
cgagtcctcaagggagagcaaggggaggatggagctgcagggcctccagggccccctgga
cctcctggggcccggggccctcccggtgacactggaaaagacggccccagggccgctcag
ggcccagcgggtcccaagggagagcctggacagcacggcgaggtggtcagtatcccagac
ctggcagcccctttcccacgcaggcccggtctggaggagggccccaagggacccccaggt
ccccagggtgagcctggcacccccggagagaagggggaagacgggatgcccagccagccc
gggctccctggacccccggggcccaagggtgagccggggagtgcaggacctcaaggacag
gatggcgtggatggtgcccctggaccaaagggggagcccgggcctcgaggcaccgaggga
gcagcagggccccggggtgccccaggcctcaagggggagcagggggacacagtggtgatc
gactacgacggcaggatcctggacgccttgaagggtcctcccgggccgcagggagcccca
gggccaccagggatacccggagccaaggtcagtggagatgcagctacatggtccctggga
cctggtacccacccaccctctcctctcagccaggtccccagcccccacatctcttctgca
agcagcctgagtgctggggggccccttctagccaagcaagtgccctctgcaggcccctgg
ctgctgcccactgcccaccctgagaagactccttcatacttacctgacgtcctcccgggg
acacctggctggacctccatgtgcatgtgcacagccagcactttggccatgcccgcttgg
tataccctcccacttgccctggatcttgaagtcagacagggtctggtcctggcttcactg
tccctgggctctgggcccgggacctcagcttccagcgctgtgacctcacaacctgaaggt
gacagcctggtgctacagctgcccccaaagctcagcaaatacagaacgccttgctggaag
tctccgaggcaccagggaagctgcccagggtcccaaaggaccgaaaggagactcaggaga
gccggggccaacaggacccaagggagaagcgggcgagatgggcttacccggccttccggc
ccagatcatagcagaaccagggccacccggcccccccgggcctcctggccccatgggcct
ccagggcatccagggtcccaagggcttggatggagcaaagggagagaggggcgcgtcggg
tga

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