Cavia porcellus (domestic guinea pig): 100724155
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Entry
100724155 CDS
T07777
Symbol
Pkd1l2
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpoc04040
]
100724155 (Pkd1l2)
04091 Lectins [BR:
cpoc04091
]
100724155 (Pkd1l2)
Ion channels [BR:
cpoc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100724155 (Pkd1l2)
Lectins [BR:
cpoc04091
]
C-Type lectins
Others
100724155 (Pkd1l2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
Ion_trans
GPS
MpPF26
PaREP1
Motif
Other DBs
NCBI-GeneID:
100724155
NCBI-ProteinID:
XP_003462903
LinkDB
All DBs
Position
Unknown
AA seq
1608 aa
AA seq
DB search
MPGGGSCCCSSLGEPVQASQALYLASKALLTASATARPEDQRRQAATRDLFAAMGSALDA
SLSHGPEDPGETNASQAAPVAQLLRVAEHLQTALLLGTLPGGLPSTLATPSISVYTNRIQ
PWKWRGASLHVAAANSAAFTLPAGTLRSAQHAQEPVDIRMMSFPQSPFRASSGRTVSGTV
GSLCLSGPSGHPIPVRNLSEKVEILLPRPPEGHSAPTLLNLTRAEVLQVNVTSPGSALGV
QLHGGPGVPLRLSLGYGYHPNATSYDAQTRLPPAAAPDEPATWILGPEELPAGEGTYYLS
VVPESDLELSPGEDLTIGVTTFLSHCMFWDEVREIWDDAGCQVGPRTTRSWAHCLCSHLT
FFGSSFLVMPNVVNVRQTAELFATFEDNPVVVGTVGGLCVLYVLAVIWARRKDVQDRAKA
KITVLEDNDPLAQYHYLVTVYTGHRRGAATSSKVTITLHGLDGDSEPHHLADPASPRLER
GGVDVFLLSTLSPLGELRSLRLWHDNSGDRPSWYVSRVLVHDLATGQKWYFLCNSWLSID
VGDCVLDKVFPVATEQDRKQFSHLFFLRTSAGFQEGHLWYSVFSSSARSRFTRVQRVSCC
FSMLLCTMLTSIMFWGVPKDPAEQKMDLGDIEFTWQEVMIGLESSLLMFPINLLIVQLFR
HARPRGAKEQDAGSPGPAPAPRPLDGGPVTPEAVTKDTQQLVSLLCGALRLPAPALGGDS
LSLMDINALLALAEDILHPQNPAAARGHREEAGGTADTLAVALGPAPVTGVHWPMLPKGC
GFRAGWRLRQGLGGLRAPAESPPVYAMATCHPHDAELHISRPRFLFPLVPLSPYPTQGCG
HLSAPSAPRPLLALTLHWLHHLRSVGQGGEADKRERTQCPGPEAAWMDLWKDATRRQYLY
GQLEHLERELQLLGPRGFPQQQDHARALGQLRTLKGHLGVAAPARARAPRASVPLRGLPW
WCALVAWLLVAVTSGTAAFFTMLYGLHYGRASSLRWLLSMAVSLVESVFVTQPLKVLGFA
AFFAMVLKRADDEDEEMELPLPGHLSGPGPCAVFRARRHSRRGVYQPPPPAAIEQMKAAR
LKEQKALALILEILVYLGFLWMLLLAAYNQRDPSAFHLTRHLERSFARGFADPLGFPEFF
EWANSTLLSNLYSPHPGFVTDGNSKLVGSAHIRQVRVRDGSCLLAPQLRASLSGCRAPYS
LDQEDRADYGEDWNASAPDSGDHFPLAWRYQSQSQLRGYPTWGRLALYPGGGYVVPLGTE
RQSASRVLQYLFNHAWLDTRTRAVFVEFTVYNANVNLFCVVTLTLETSGLGTFSTHAALH
SLRLLLLPDGWHPFVVAAELLYFVFLFYYMVVQGQRVRRQKWRYFRSKWNLLELAIILAS
WSALAVFVKRAVLAERDLQRYRKHRADGVSFSETAAADAALGYIIAFLVLLSTVKLWHLL
RLNPKMNTITSALRRAWGDISGFLIVILIMLLAYSITSNLLFGWKLRSYKTLLDALETMI
SLQLGIFNYEEVLDSSPVLGSFLIGSCVIFMTFVVLNLFVSVILVAFSEEQKCDQPSEEA
EIVDLLLMKILSFLGIRCRREELQGGQEQPESPSTAQAPRPARALPGV
NT seq
4827 nt
NT seq
+upstream
nt +downstream
nt
atgccgggtgggggctcatgctgctgctcctccttgggtgaacccgtgcaggccagccaa
gctctgtacctcgccagcaaggccctgctgacagcgagtgccaccgcccgtcctgaggac
cagaggcgccaggcggccaccagggacctgtttgcagccatgggaagtgcactggatgca
tccctgagccacggcccagaggaccctggcgagaccaacgccagccaggcagcccctgtg
gcccagctgctcagggtggcagagcacctgcagaccgccctcctgctgggcacgctgcct
gggggacttccgtccaccctggccaccccctccatctccgtgtacacaaacaggatacag
ccgtggaagtggcgaggggcctccttgcacgtggccgctgctaactcggcggccttcacc
ctgcctgccggaaccctccgttctgcgcagcacgcacaggagccggtggacatcaggatg
atgagcttcccgcagagccccttccgggccagcagcggccgcactgtcagcggaaccgtg
ggcagcctgtgtctgagcggccccagtggacaccccatccccgtgaggaacctgtccgag
aaggtggagatcctgctgccccggcctccggaaggacacagcgctccgaccctgctgaac
ctgacccgggctgaggtgctgcaggtgaacgtgacctctccagggtcggctctgggggtc
cagctgcacgggggccctggcgtcccactcaggctcagcctgggctacggataccacccc
aacgccaccagctacgacgcccaaacccgcctgccaccagcggcggctccagatgagccg
gccacgtggatcctgggccccgaggagctgcccgctggggaaggcacctactacctaagt
gtggtccctgagtccgacctggaactgtcccctggggaggacctcaccattggcgtcacc
accttcctgtcccactgcatgttctgggacgaggtccgggagatttgggatgacgccggg
tgccaggtggggccgaggaccacgcgctcctgggctcactgcctctgcagccacctcacc
ttcttcgggagcagcttcctggtgatgcccaacgtggtcaacgtccggcagacggcagag
ctctttgccaccttcgaggacaaccccgtggtggtgggcaccgtgggcggcctgtgcgtg
ctctacgtgctggcagtgatctgggcgaggaggaaggacgtgcaggaccgggctaaggcg
aagatcacagtgctggaggacaacgaccccttggcccagtaccactacctggtgaccgtc
tacaccggacaccggcgaggggcggccacgtcctcaaaggtgaccatcaccctgcatggc
ctggacggagacagcgagccgcaccacctggcagaccctgcatccccccggctggagcgc
ggaggcgtggatgtcttcctgctgtccaccctgtcccccctgggggagctgcggagcctc
cggctgtggcatgacaactcaggggaccggccatcctggtatgtgagccgggtgctggtc
cacgacctggccacgggccagaagtggtatttcctctgcaactcgtggctgtccatcgac
gtgggagactgtgtcctcgacaaggtgtttccggtggccacggagcaggacaggaagcag
ttcagccacctgttcttcctgaggacgtccgcaggcttccaggaaggccacctctggtac
tctgtcttcagcagctcagcgaggagccgcttcacgcgggtgcagcgggtgtcctgctgc
ttctccatgctgctctgcaccatgctgaccagcatcatgttctggggcgtccccaaggac
cccgcggagcagaagatggacttgggagacatcgagttcacctggcaggaggtgatgatc
gggctggagagctccctgctcatgttccccatcaacctcctgatcgtgcagctcttccgc
cacgcccggcctcggggcgccaaggagcaggacgctgggagccccggcccggccccagcc
ccgcggcccctggacggtggccccgtcacacctgaagccgtgaccaaggacacacagcaa
ctggtcagcttgctgtgtggagccctgaggctgccggcgccagccttgggcggggactct
ctgagcttgatggacatcaatgcactgctggccttggcggaagacatccttcaccctcag
aacccagcagcagcacggggacaccgggaggaagccggggggacagcggacactttggct
gttgccctcgggcctgcgccggtcacaggtgtgcactggccgatgctgcccaagggctgc
ggcttcagggctgggtggaggctcaggcaggggcttggagggttgagggctcctgcggag
tcccctcccgtctacgccatggccacctgccatccccatgatgccgagctgcacatcagc
cggcctaggttcctcttccccctggtccctctcagcccctaccccacccaggggtgcggg
catctgtcagcaccttctgcccctcgacctctcctggcgctcaccctgcactggctgcat
catttgagaagcgtggggcaggggggtgaggcagacaaaagagagaggacccagtgcccc
gggcctgaggcagcctggatggacctctggaaggacgccacccgcaggcagtatctctac
ggccagctggagcacttggagcgggagctgcagctgctgggaccccgcggcttcccacag
caacaagaccatgccagggcactcgggcagctgcggaccctaaaaggccacctgggggtg
gccgcccctgcccgtgccagggctccccgcgccagtgtgcccctgcgcggcctgccctgg
tggtgcgccctggtggcctggctcctggtggcggtcaccagcggcacggccgccttcttc
accatgctttatggcctgcactatgggcgcgccagctccctgcggtggctgctgtccatg
gccgtgtccttggtggagagtgtgttcgtcacccagcccctcaaggtgctgggcttcgcc
gctttctttgcgatggtcttgaagagagcagatgatgaggacgaggagatggagctgccc
ctgccgggacacctgtctggcccaggtccctgtgccgtcttcagggctcggagacacagc
cgcaggggcgtctaccagccacctccacctgccgccatcgagcagatgaaagccgccagg
ctgaaggagcagaaggcgctggccctcatcttggaaatcctggtgtacttgggtttcctg
tggatgctgctgctggcggcctacaaccagagggaccccagcgccttccacctcaccagg
cacctggagcgcagcttcgccagaggctttgccgacccgctgggcttcccagagttcttc
gagtgggccaacagcaccctcctgagcaacctgtacagcccacacccaggcttcgtcaca
gatgggaactccaagctggttggcagtgcccacattcgccaggtgagggtccgggacggc
tcctgcctgctggccccacagcttcgagcctccctgagtggatgccgcgcgccatactcg
ctggaccaggaagaccgggcggactacggggaagactggaacgcctctgcccccgacagc
ggtgaccactttcccctggcctggcgctaccagagccagagccagcttcgagggtacccg
acgtggggcaggctcgctctgtaccccggagggggctacgtggtccctttggggactgag
cgccagagtgcgtccagagttctccagtatctctttaaccacgcctggctggacacccgg
accagggccgtgttcgtggagttcaccgtctacaacgccaacgtcaacctcttctgtgtg
gtcacactcacgctggagaccagcggcctgggaaccttctccacccacgcggccctgcac
agcctccgcctgctcctgctccccgacggctggcaccccttcgtggtggcagccgagctc
ctgtacttcgtcttcctcttctactacatggtggtgcagggccagcgtgtgcggaggcag
aagtggcgctatttccgcagcaagtggaacctgctggaactggccatcatcctggccagc
tggagcgccctggcggtgtttgtgaagagggctgtcctggcggagcgggacctccagcgc
tatcggaagcacagggcagacggggtcagtttcagtgagacagcagcggctgacgctgcc
ctcggatacatcattgccttcctggtgctcctgtccaccgtgaagctctggcatctgctc
aggctgaaccccaaaatgaacacgatcacgtcggccctgcgccgagcctggggtgacatt
tcgggcttcctcatcgtcatcctgatcatgctcctggcttattctatcacatcaaaccta
ctatttggttggaaactccgttcctacaaaaccctcttggatgcactggaaacgatgatc
agcctgcagctaggaatcttcaactatgaggaggtcctggactccagcccagtgcttggc
tccttcctaattggatcatgtgtcatttttatgacctttgtggtgctgaatctgtttgtc
tctgtcatcctggtggccttcagtgaggagcaaaaatgtgatcagccgtcggaggaagca
gaaatcgtggatttgctcctgatgaaaatactgagtttcttgggcatccgatgcagaaga
gaggagcttcagggcggccaggagcagccggagtcgccctccacggctcaggcccctcgg
ccagcacgagctttgccaggagtttaa
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integrated database retrieval system
