Cavia porcellus (domestic guinea pig): 100724437
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Entry
100724437 CDS
T07777
Symbol
Prpf38a
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100724437 (Prpf38a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpoc03041
]
100724437 (Prpf38a)
Spliceosome [BR:
cpoc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
100724437 (Prpf38a)
Complex C
U4/U6.U5 tri-SnRNP related factors
100724437 (Prpf38a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
100724437
NCBI-ProteinID:
XP_003463118
Ensembl:
ENSCPOG00000005079
UniProt:
A0A286XVL5
LinkDB
All DBs
Position
Unknown
AA seq
312 aa
AA seq
DB search
MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRFVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHSERVCDIILPRLQKRYVLEEAEQLEPR
VSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPR
RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKKSRRGNE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccgtacagtaaaggatgcgcatagcatccatggcacaaacccccagtatctg
gtggaaaagatcattcggacgcgaatctatgaatccaagtactggaaagaagagtgcttt
ggactcacagctgaacttgtagttgataaagccatggagttaagatttgtgggtggcgtc
tatggtggaaacataaaaccaactccctttctgtgtttgaccttgaagatgcttcaaatt
cagcctgagaaggacatcattgtagagtttataaaaaatgaagatttcaagtatgtccgc
atgttgggcgcgctttacatgaggctgacaggcactgcaattgattgctacaagtacttg
gaacccctgtacaacgactatcgaaaaatcaagagccagaaccgaaatggagagtttgaa
ctgatgcatgtagatgagtttattgatgaactgctgcacagtgagagagtctgtgatatc
attctgccccggctacagaaacgctacgtgctagaagaagctgagcaattggagcctcga
gttagtgctctggaagaagacatggatgacgtggagtctagtgaagaggaggaggaggaa
gatgagaagttggaaagagtgccatcacctgatcatcggcggagaagctaccgagacttg
gataagccccgtcgctctcccacactgagatacaggagaagtagaagtcggtctcccaga
aggcggagtcgatctcccaaaaggaggagtccttcaccccgcagagagagacatcggagc
aagagcccaagacgacacagaagcaggtcccgagacagacgacacagatcccgctccaag
tccccaggtcatcaccgtagtcacagacataggagccactcaaagtctcctgaaaggtca
aagaaaagccataagaagagccggagaggaaatgagtga
DBGET
integrated database retrieval system
