Cavia porcellus (domestic guinea pig): 100724472
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Entry
100724472 CDS
T07777
Symbol
Supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpoc03021
]
100724472 (Supt6h)
03036 Chromosome and associated proteins [BR:
cpoc03036
]
100724472 (Supt6h)
Transcription machinery [BR:
cpoc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
100724472 (Supt6h)
Chromosome and associated proteins [BR:
cpoc03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
100724472 (Supt6h)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
100724472
NCBI-ProteinID:
XP_003469773
Ensembl:
ENSCPOG00000001442
UniProt:
H0UW78
LinkDB
All DBs
Position
Unknown
AA seq
1726 aa
AA seq
DB search
MSDFVESEAEESEEEYNDEGEVVPRVTKKFVEEEDDDEEEEEENLDDQDEQGNLKGFIND
DDDEDEGEEDEGSDSGDSEDDVGHKKRKRTSFDDRLEDDDFDLIEENLGVKVKRGQKYRR
VKKMSDDEDDDEEEYGKEEHEKEAIAEEIFQDGEGEEGQEAVEAPMAPPEEEEEDDEESD
IDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYGEFEKYNEYDEELEEEY
EYEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQL
RSIPVKGAEDDELEEEADWIYRNAFATPTISLQESCDYLDRGQPTSSFSRKGPSTIQKIK
EALGFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLRIRKENLTRLFEKM
QAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQN
AAKASRKKLKRVREEGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQSAGLDGLAKKFG
LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREP
LVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRDDQFLKMGLAE
DEGLLVIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERALQQF
LYVQMAKELKNKLLAEAKDYVIKACSRKLYNWLRVAPYRPDQQVEEDDDFMDENQGKGIR
VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETLKKFL
LNKKPHVVTVAGENRDAQMLIEDIKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSE
AEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFHPLQEHVVKEELLNSLYC
EFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTM
CHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTA
YRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPF
CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVG
MTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPKDTYYDFDAEAADHKQEEDMKRKQ
QRTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQH
VDVREEGKENAFSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDR
KKLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQI
FPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMT
SQMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFPTPAQQPVATPLMTPS
YSYTTPSQPITTPQYHQLQASTTPQSAQAQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQ
WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttgtagaaagcgaagctgaagagtcagaggaagaatacaatgatgaaggc
gaggtggtgccccgagtcaccaagaaatttgtggaagaagaggatgatgatgaagaggag
gaagaggagaacctagatgatcaagatgagcaaggcaacctaaaaggctttattaatgat
gatgatgatgaagatgaaggagaggaggatgaaggcagtgactctggtgattcagaagat
gatgttggtcacaaaaagagaaaacgcacatcttttgatgatcgcctggaggatgatgat
ttcgacctcattgaggagaatttgggtgtcaaagtcaaacgaggacaaaaataccgacgt
gtcaaaaaaatgtcagatgatgaagatgatgatgaagaggaatatggcaaggaggagcat
gaaaaagaagctatcgctgaggaaatcttccaggatggggaaggggaagagggacaggag
gctgtggaggcccccatggctcctccagaggaagaggaggaagatgatgaggagtcagat
attgatgacttcattgtagatgatgatggacagcccctgaaaaaaccaaagtggcggaaa
aagcttcccggatacacagatgcagccctacaagaagcccaggagatctttggtgtcgat
tttgactatggtgaatttgagaagtataatgagtatgatgaagaattggaagaagagtat
gaatatgaggatgatgaggctgaaggtgaaatccgagtgcggcccaagaagaccaccaag
aaacgtgtgagtcgcaggagcatctttgagatgtatgagcctagtgagctggaaagcagc
cacctcacagatcaggacaatgaaatccgagccactgacctgcctgaaaggttccagctc
cgctctatccctgtcaagggggctgaagatgatgaactagaagaagaagctgactggatc
tacaggaatgcatttgccacaccaaccatttctctacaggaaagctgtgattacctagac
cgaggccagccaacaagcagctttagtcgaaaagggcccagcacaattcagaagatcaaa
gaggccctgggtttcatgagaaatcagcattttgaggtccctttcattgctttctaccga
aaggaatacgtggagcctgagttgcacatcaatgacctatggagggtgtggcagtgggat
gaaaagtggacccagctaaggatccgcaaagaaaacctaacacggctgtttgagaaaatg
caagcttatcagtatgagcaaatctctgctgaccctgacaaacctcttgctgatggcatc
cgggctctggacaccaccgacatggaaaggctcaaggatgtacagtcaatggatgagttg
aaagatgtctataaccattttctgctttactatggtcgtgacatccctaaaatgcagaat
gctgccaaggctagccgcaagaagctgaagcgtgtaagagaagagggcgatgaagaaggg
gaaggtgaggaggcagaagacgaagaacagaggggaccagagctcaagcaggcctcccgc
cgagacatgtacaccatctgccagagtgcagggctagatggcttggccaaaaagtttggg
cttactcctgagcaatttggggaaaacctgcgggacagctaccagcggcatgaaacagaa
caatttcctgcagaacctttggagctggccaaggattatgtttgcagccagttccctact
ccagaagctgtgctggaaggtgcccgctacatggtagccctgcagattgcccgtgaaccc
cttgtccggcaggtgctgaggcagacctttcaggagagagccaagctaaatataacccct
accaagaaaggtagaaaggatgtggatgaagcccactatgcctattcctttaaatattta
aagaataaacctgttaaagaactgagagatgaccagttcctcaagatgggcctggctgaa
gatgaggggctgcttgtcattgacatcagcatagatatgaagggagtggagggctatggc
agtgaccagacatattttgaagaaatcaaacagttctattaccgggatgagttcagccac
caagttcaggagtggaaccgacagcgcaccatggccattgagcgagctctacagcagttt
ctctatgtgcagatggccaaagagctcaagaacaagctcctggctgaggccaaagactat
gtcataaaggcctgtagccgaaagctctacaattggttgagggtagcaccctacagacca
gatcagcaagtagaagaagatgatgactttatggatgaaaaccaagggaaaggcattcga
gtcctaggcattgctttttcctctgccagagatcaccctgtgttctgtgccctggttaat
ggtgaaggagaagtgacagattttctccggctgccccactttaccaaaaggcgaactgca
tggagagaggaagaacgagaaaagaaggcacaagatattgaaacgctgaaaaaatttctt
ctgaacaagaaacctcatgtggtaacagttgcaggagagaacagggatgcccagatgtta
attgaggatataaagcgcattgtgcatgagctggaccagggccaacaactgtcttctatt
ggagtggagctggttgacaacgagttggccattctgtatatgaacagcaaaaagtcagag
gcagagttccgggattaccctccagtactgagacaagctgtctccctggcccggcgcatc
caagaccctctgatagagtttgcccaggtgtgcagctccgatgaagacatcctgtgtctc
aagtttcaccccttgcaggaacatgttgtgaaagaagaactgctcaattccttatactgt
gaatttatcaaccgagtcaatgaggtcggggtcgatgtcaaccgtgccattgcccaccct
tacagccaggctttgatccagtatgtctgtggcctgggacctcgaaaagggacccacctt
ctgaagatcctgaagcagaacaacactagacttgaaagccggacccagctggtcaccatg
tgtcacatgggtcccaaagtcttcatgaattgtgctggcttcctcaagattgacacagcc
tccctgggggacagcactgactcatatattgaagtccttgatggttcccgagtccaccct
gagacttacgagtgggccaggaagatggcagtagatgccctagaatatgatgagtcagct
gaggatgccaatcctgcaggagccctcgaagaaatcttggaaaacccagaacgactcaag
gacttggaccttgatgcttttgcagaagaactggagagacagggctacggtgacaaacac
atcacactgtatgacatccgggcagaactgagttgtcgatacaaggacctccggacagca
taccgctctcctaatacagaggagatcttcaatatgttaaccaaagaaacaccagaaact
ttctacattggaaagctcatcatctgcaatgtcactggcattgctcacaggcgtccacag
ggtgagagctacgaccaggcaatccggaacgatgagacagggctgtggcagtgccccttc
tgtcagcaggacaacttccctgaactgagtgaggtctggaaccactttgacagcggttcg
tgcccaggccaggcaattggtgtcaaaacacggttagacaatggtgtcactggcttcatc
cccaccaaattcctcagtgacaaagtggtaaagcgaccagaggagcgagtaaaggtggga
atgactgttcactgccgcatcatgaagattgacattgagaagttcagtgcagacttgacc
tgccgtacctcagacctcatggacaggaacaacgagtggaaactccccaaagatacctat
tatgactttgatgctgaagcagcagaccacaaacaagaggaggacatgaagcggaagcag
cagcggaccacatatatcaaacgagtgattgcacatccatccttccataatattaatttc
aagcaagcagaaaagatgatggagaccatggaccagggtgacgttatcatccgaccaagc
agtaagggagagaaccacctaaccgtgacctggaaagtcagtgatggcatctatcagcac
gtggatgtgcgtgaggagggcaaggaaaatgccttcagcctgggagccacgctgtggatc
aacagtgaggaatttgaagacttggatgagattgttgcccgctatgtccagcccatggca
tcctttgcccgggaccttctgaaccacaagtattatcaggactgcagtggtggggaccgc
aagaaattagaggagctgctcatcaaaactaagaaggagaagcccaccttcatcccttat
ttcatctgtgcctgcaaggaactgcccggcaagttcctcctgggataccagccccggggt
aaacccaggatagaatatgtaacggtgactccagagggattccggtaccgtggccaaatc
ttcccaactgttaatggacttttcagatggtttaaggatcactaccaagatcctgtacca
ggcatcacccccagcagcagcagcaggacaaggactcctgcctctatcaatgctaccccg
gccaacataaaccttgcagatctaactcgggccgtgaatgccctgccccagaacatgact
tcgcagatgttcagtgccattgctgctgtaacaggccagggtcagaaccctaatgccacc
ccagcccagtgggcctccagccagtatggctatggtggcagtggaggaggcagcagtgct
taccacgtgttcccgacaccagcccagcagccagtggccacgccactaatgacccccagc
tattcctacacaaccccaagccaacccatcaccacaccacagtaccaccagctccaggcc
agcaccactccacagtctgcccaagcccagccccagccctcctccagctcccggcaacgg
cagcagcagccaaagtccaacagccatgcagctatcgactggggaaagatggcagagcag
tggctgcaagagaaggaggcagaacggcggaaacagaagcagcggctaacacctcggcct
tcccccagccccatgatcgaaagcacccccatgtccattgctggcgatgccaccccactc
ctggatgagatggatcggtag
DBGET
integrated database retrieval system
