Cavia porcellus (domestic guinea pig): 100724806
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Entry
100724806 CDS
T07777
Symbol
Atg2b
Name
(RefSeq) autophagy-related protein 2 homolog B isoform X1
KO
K17906
autophagy-related protein 2
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc04136
Autophagy - other
cpoc04140
Autophagy - animal
cpoc05010
Alzheimer disease
cpoc05014
Amyotrophic lateral sclerosis
cpoc05016
Huntington disease
cpoc05017
Spinocerebellar ataxia
cpoc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100724806 (Atg2b)
04136 Autophagy - other
100724806 (Atg2b)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
100724806 (Atg2b)
05014 Amyotrophic lateral sclerosis
100724806 (Atg2b)
05016 Huntington disease
100724806 (Atg2b)
05017 Spinocerebellar ataxia
100724806 (Atg2b)
05022 Pathways of neurodegeneration - multiple diseases
100724806 (Atg2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpoc04131
]
100724806 (Atg2b)
03029 Mitochondrial biogenesis [BR:
cpoc03029
]
100724806 (Atg2b)
Membrane trafficking [BR:
cpoc04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
100724806 (Atg2b)
Mitochondrial biogenesis [BR:
cpoc03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
100724806 (Atg2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
DUF7054
Motif
Other DBs
NCBI-GeneID:
100724806
NCBI-ProteinID:
XP_005000545
Ensembl:
ENSCPOG00000006959
UniProt:
H0V905
LinkDB
All DBs
Position
Unknown
AA seq
2081 aa
AA seq
DB search
MPWPFSESIKKRACRYLLQRYLGHFLQEKLSLEQLSLDLYQGTGSLAQVPLDKWSLNEIL
ESADAPLEVTEGFIQAISLSVPWGSLLQDNCALEVKGLEMVFRPRPRLATGSEPMYWSSF
MTSSMQLAKECLNQKLTDEQGEGSQPFEGLEKFAETIETVLRRVKVTFIDTVLRIEHVPE
NSKTGTALEIRIERTVYCDETADDSSGINVHQPTAFAHKLLQLSGVSLFWDEFSASAKSS
PVCSAAAVETEPKLSPSWNPKIVYEPHPQLSRNLPEIAPSDPVQIGRLIGRLELSLTLKQ
NEVLPGAKLDVDGQIDSVHLFLSPRQVHLLLDMLAAVAGPENSSKIGLANKDRKNRPMQQ
EDEYRIQMELNRYYLRKDSLSVGVSSEQSFYETETARTPSSREEEVFFSMADMDMSHSLS
SLPPLGDPPNMDLELSLTSTYTNTPAGSPLSATVLQPTWGEFLDHPKEQPMVRGPAFPPS
LAHPAPLQKAALPSRSISMDESRPELIFRLAIGTFSVSVLHIDPLSPPETSLNLNPLTPM
AVAFFTCIEKIDPARFSAEDFKSYRAVFAEACSHDHLRFIGTGIKVSYEQRQRSALRSFS
TDVAIGQMELLECLFPTDFHSVPPHYTELLTFHSNEGSDIHPPLCLQLHYKHSENKGTQG
HQARLTSVPQKAELQIKLNPVCCELDISIVDRLNSLLQPQKLTTVEVMASHMYASYNKHI
SLHKAFTEVFLDDSHNPANCRVSVQVATPALNLCVRFPIPDLRSDQERGPWFKKSLQKEI
LHLAFSDLEFKTEFVGGSTPEQIKLELTFRELTGSFQEEKGEASLKFFHVSGGVDGNTAS
SDDFDWPRMVLKINPPAMHSILERIAAEEEEEEEENDSHYQEEEEGCAHSLKDVCDLRRP
APSPFSSRRVMFENEQMVMPGDPVEMTEFQDKAMSNSRYVLELMLPNIHITLPNKSFYEK
LYNRIFNDLLLWEPTAPSPVETFENLSYGIGLSVASQLINTFNKDSFSPLKSTVHYDEES
GSEEETLQYFSTVDPNYRSRRKKKLDPQNKNSQSFLSVLLNINHGLMAVFTDVKQDNGEL
LENKHGEFWLEFSSGSLFCVTKYEGFDDKHYICLHSSSFSLYHKGIVDGAILPTETRLPC
SSRPHWLEPTIYSTEEDGRSRAASDGVGGDNLNMLSVAVKILSDKSESNTKEFLIAVGLK
GATLQHRMLPSGLSWHEQILYFLNIADEPVLGYNPPTSFTTFHVHLWSCALDYRPLYLPI
RSLLTVETFSISSSVALDKSSSTLRIIMDEAAVHLSDRCNNVTINLNRDYVRVMDMGLLE
LTITAVKSDSDGEQTEPRFELHCSSDSVHVRTCSDSCAALMNLIQYIASYGDLHAPPKVA
SKPGTPQRKSKVESSVQASSRGPVLPEAEQQILRDLMSDAMEEIDMEPATSTVKPQANGV
LDEHSQIQEPCCSDLFLFPDESGNVSQEPGPTHTSFTHHPISDTMAGVPTENDDFCILFA
PKAAVQEKEEEPIIRIMVDDAIVIRENYFSLPVKKTDTSKAPLHFPIPVIRYVIKEVSIV
WHLYGGKDFGAVPPTSPAKSFISPHSSPSHTPTRHGRNTVCGGKGRNHDFLMEIQLSKVK
FQHEVYPPCQPDHDSSLLEHPVSRQVFIVQDLEIRDRLATSQMNKFLYLYCSKEMPRKAH
SNMLTIKALHVRPESGRSPQECCLRVSLMPLRLNIDQDALFFLKDFFTSLSMEVELLLTP
DPEVKKSPGADVTCSLPRHWSTSKEPNVVLSFPGPKQPSQTDSANSGDMANGVEEELSAE
EASFSDQPVFFREFRFTSEVPIRLDYHGKHVSMDQGTLAGILIGLAQLNCSELKLKRLFY
RHGLLGVDKLLSYAITEWLTDIKKNQLPGILGGVGPMHSLVQLVQGLKDLVWLPIEQYRK
DGRIVRGFQRGAASFGTSTAMAALELTNRMVQTIQAAAETAYDMVSPGTLAIEPKKAKRF
AHHRLAHQPVDLREGVAKAYSVVKEGIADTAQTIYETAAREHESRGVTGAVGEVLRQIPP
AVVRPLIVATEATSNVLGGMRNQIRPDVRQDESQKWRRGED
NT seq
6246 nt
NT seq
+upstream
nt +downstream
nt
atgccttggccgttctcagagtccatcaagaagagggcctgtcggtacctcctgcagagg
tacctgggccacttcctgcaggagaagctgagcctggagcagctcagcctggacctgtat
cagggaaccggatccctcgcccaggtccccctggacaaatggagtcttaatgaaatcctg
gagtcagcagatgcacctttagaagtcactgaaggcttcattcaggcaatctcgctgtca
gttccgtggggctctttgctgcaggacaactgtgcgctcgaagtgaaagggttagaaatg
gtctttcgccctcgacctcgtctcgcaactggttctgagcctatgtattggtcaagtttc
atgaccagcagtatgcagttggccaaagagtgtcttaaccagaaactaacagatgagcag
ggagaaggatcccagccctttgaaggacttgaaaagtttgctgaaaccatcgaaacagta
ctaagaagagtaaaagtcacttttatagacacagttttgagaattgaacatgtgccagag
aactccaaaactgggactgcacttgaaattcgaatagagagaactgtatactgtgatgaa
actgctgatgattcctcaggaattaatgtacatcaacccacagcttttgctcacaaattg
cttcagctctctggagtgtctctcttctgggatgagttttctgcatcagcaaaatcttcc
cccgtctgttcagctgcagcagtggaaactgagccaaagctgtcacctagctggaacccc
aagattgtttatgagcctcacccacagctaagtaggaatttacctgagatagcaccctca
gacccagtgcagattggacggctaattggtcggttggaattgagtctcacattgaaacag
aatgaagtacttcctggagcgaagttggatgtggatggacagatagactctgttcacctg
ttcctgtcaccaaggcaggtccacttgcttttggatatgttagcagctgttgctgggcca
gaaaattctagcaaaatagggttagctaataaagataggaaaaaccgacctatgcaacag
gaagacgagtatcgaattcagatggaattaaaccggtattatttgagaaaagattccctg
tctgtgggtgtatcttcagagcaaagcttttatgagacagaaacggctcgtacaccttct
agccgtgaagaagaagttttcttctccatggcggatatggacatgtcccatagtctctct
tctcttccacccctcggggatcccccaaatatggatctggagttatcactaactagtaca
tacacaaataccccagcaggatccccattaagtgctactgtgcttcagccaacctgggga
gagttccttgatcatcctaaagagcagcccatggtgagagggccagcatttccacccagc
ctggctcacccagcacctttgcaaaaggcagctctcccatctagatccatttcaatggat
gaatccaggcctgagcttatttttagactagctattggaactttttcagtctctgtgctt
cacattgatcctttatctccacctgagacatcattgaacctcaatccattaacaccaatg
gctgtagctttctttacttgtatagaaaagattgatccagcaagattttcagcagaagat
tttaagtcttatcgagcagtatttgcagaagcttgctcacacgatcaccttagatttata
ggtactggcatcaaagtatcctatgaacaaagacaaaggtctgctttgcggtctttcagt
acggatgtggccattggccaaatggagcttttagagtgtctgtttcccacggattttcat
tctgttcctcctcactatacagagcttttaaccttccattctaatgaaggatctgacatc
catcctcctctgtgtcttcagcttcattataagcattcagagaacaaaggaacccaaggt
catcaagcaagacttacttcggttcctcagaaggcagaattacaaattaagctaaaccct
gtgtgttgtgagctggatatcagcatcgtggacaggttaaattccttgcttcagccacag
aagcttaccaccgtggaggtgatggcctcgcacatgtacgcttcatataataagcacatt
agcttgcacaaggctttcactgaagtatttctagatgattcccataatcctgcaaattgt
cgggtgtcagtacaagttgccactccagcgttaaatctttgtgttcgcttcccaatacct
gatcttcggtcagatcaagaaagaggaccgtggtttaagaagtcacttcaaaaggagatc
cttcacttagcattctcagacctggaatttaagaccgaatttgtaggaggatcaacccca
gaacaaattaaattggaacttacttttagagaactaactggatcattccaggaggagaaa
ggagaggcctctcttaagtttttccacgtgtctggaggtgtagatggaaatacagcttca
tcagatgactttgactggccacgaatggtactgaaaatcaatcccccggccatgcattcc
attttggagagaatagccgcggaggaggaggaggaggaggaagagaacgacagtcactac
caggaagaggaggaggggtgcgcgcattccctgaaagatgtctgcgacctgaggcggccg
gccccgtctccgttttcttcccgtagagtgatgtttgaaaatgaacagatggtgatgcct
ggagaccctgtagaaatgacagagttccaagataaagcaatgagcaattctcgctatgtg
ctggaactgatgttaccaaatattcacataacactgcctaataaaagcttttatgagaag
ctttacaataggatctttaacgacttgctgctctgggagcccacagctccctccccggtg
gagacatttgaaaatctttcctatgggatcgggctgtccgtggccagtcagctgattaac
accttcaacaaagacagttttagtccacttaaatctactgttcactatgatgaagaaagt
ggatctgaggaagagactttgcagtatttttctactgttgatcccaattatcgttcccgt
aggaaaaaaaaattagaccctcagaacaagaactcccagagttttctctcagttcttctg
aatattaatcatggattgatggcagtgttcacggatgtaaagcaagataatggagaactg
ttggaaaacaagcatggcgaattctggctggagttcagtagtggttcattgttttgcgtg
acaaaatacgaaggttttgatgacaagcactacatttgccttcactctagcagtttcagt
ctgtaccacaaaggcatagtggatggagcgattcttcccacagaaacacgcctgccctgc
tcaagccgcccacactggttggaacctactatttattccactgaggaagatgggcgcagt
agagctgcttcagatggtgtgggaggggataatctcaatatgctctctgttgcggtcaag
atactgtcggataagtcagagtccaatacgaaggaatttctcattgctgtaggactgaaa
ggagccacccttcagcaccgaatgcttccgtctgggcttagctggcatgaacagatctta
tatttcttgaacattgctgatgagcctgtcttgggatataatcctccaacttcatttaca
acttttcatgttcatctttggagctgtgcacttgattacaggccactttatttgccaatc
cgatctcttcttacagttgaaacgttcagcatttctagtagtgttgcactggataaatct
tcttctactctcagaataatcatggatgaggctgctgtacatctttccgacagatgtaat
aatgtcactataaatttgaatagagattatgttcgtgtgatggacatgggacttttagaa
ttaaccataaccgcagtgaagtccgattctgatggagagcaaactgagccccgcttcgag
ctccactgttccagcgacagcgtccacgtcaggacgtgctcagactcctgcgccgcgctg
atgaatctcatccagtacatcgccagctacggtgacctccacgcgccccccaaggtggca
tcaaagcccggcaccccgcagaggaagtcaaaggtagagtccagtgttcaggcctcctca
cgtggacctgtgcttcctgaagcagagcagcagatcctacgagacctgatgagtgatgct
atggaggagattgatatggagccagccacttcgactgtaaaaccacaagctaatggtgtt
ttggatgaacactcgcagattcaggagccatgttgttcagacctcttcctgttcccagac
gagagtggaaatgtgtcccaggagccagggcccactcacacctcattcacccaccacccg
atcagcgataccatggcaggtgtgccgactgaaaatgacgacttctgcatcctttttgca
ccaaaagcagctgtccaggagaaggaagaagaaccgattataagaatcatggttgacgat
gcgattgtgatccgagagaattattttagcctgcctgtcaagaagacagatacgagcaaa
gcccctctacactttccaattccggtaattcggtatgtgattaaggaggtctccattgta
tggcatctgtacggaggcaaggattttggagcagttcctcccacttctccagcaaaaagt
tttattagtccccatagttcaccttctcacacacccacaagacacggacgtaatacagtg
tgtggggggaaaggaaggaaccatgacttcttaatggaaatacagttaagcaaggtgaag
ttccagcacgaagtctatcccccatgccagccggatcatgactccagcctcctcgagcac
cctgtctctcggcaggtgttcattgttcaggatctcgaaattcgggatcgcctggcaaca
tcacagatgaacaaatttttgtacctgtattgcagcaaagaaatgcctcggaaagctcat
tccaacatgttgacaattaaagcgttacatgtgcgtccagagtccggcaggtcaccgcaa
gaatgttgcttgagagtgtcattaatgccacttcgcctcaatattgaccaggatgccttg
tttttcctgaaggatttcttcacaagtctttctatggaagtagaactgctgctgactcca
gatccagaagttaaaaagtcccctggagccgatgtcacctgcagtttgccaaggcactgg
agcacctcgaaggagccaaatgtagttctttctttccccgggccaaaacagccttcccaa
actgatagtgccaattcaggagatatggctaacggagtggaagaggagttatcagctgaa
gaagcatcatttagtgatcagcctgtgttttttagagaattcagattcacatcagaagtt
cctattcgacttgactatcatggcaaacacgtatcaatggatcagggaacgttagctggg
attttgattggcctggcccagttgaactgctctgagctaaagctgaagcggctcttctat
cggcatggcttgctaggtgttgacaagttactgtcctacgccatcactgagtggctcact
gacattaagaagaaccagctcccaggaatcctggggggtgtcgggcctatgcattccctc
gtacagttagtccaaggcttgaaggacctggtctggctgcccatagagcagtaccggaag
gacggccgcatcgtcagaggtttccagagaggcgcggcttccttcggcacctccacagcg
atggccgccctggagctgaccaaccggatggtccagaccatacaggcagcagcagagacc
gcttatgacatggtgtctcctgggacccttgctattgagcccaagaaggccaaaaggttt
gcgcatcaccgcctagcccaccagccagtggacctgagggaaggcgtggccaaggcctac
agcgtggtgaaggagggcatcgcggacacggcacagaccatctatgagacggcggctcgg
gagcacgagagcagaggggtcaccggggccgtgggcgaggtcctgcgccagatcccccct
gcggtggtgagacctctgatcgtggccacggaggccacgtccaacgtgctgggcggcatg
aggaaccagatcagaccggacgtgcggcaggacgagtcgcagaagtggcgccgcggggaa
gactga
DBGET
integrated database retrieval system
