KEGG   Cavia porcellus (domestic guinea pig): 100724811
Entry
100724811         CDS       T07777                                 
Symbol
Rae1
Name
(RefSeq) mRNA export factor
  KO
K14298  mRNA export factor
Organism
cpoc  Cavia porcellus (domestic guinea pig)
Pathway
cpoc03013  Nucleocytoplasmic transport
cpoc05014  Amyotrophic lateral sclerosis
cpoc05164  Influenza A
Brite
KEGG Orthology (KO) [BR:cpoc00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100724811 (Rae1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    100724811 (Rae1)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100724811 (Rae1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpoc03019]
    100724811 (Rae1)
   03036 Chromosome and associated proteins [BR:cpoc03036]
    100724811 (Rae1)
Messenger RNA biogenesis [BR:cpoc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     100724811 (Rae1)
Chromosome and associated proteins [BR:cpoc03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    100724811 (Rae1)
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40 WDR55 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_EIPR1 NBCH_WD40 Beta-prop_Nup120_160 WDR90_beta-prop_4th Beta-prop_SPT8
Other DBs
NCBI-GeneID: 100724811
NCBI-ProteinID: XP_003463689
Ensembl: ENSCPOG00000008932
UniProt: H0VDH3
LinkDB
Position
Unknown
AA seq 368 aa
MSLFGTTSGFGTGGTSMFGSTTTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAG
SWANDVRCWEVQDNGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQA
IQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIY
PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGISFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAE
ELKPRNKK
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgagtctgtttgggacaacctcaggtttcggaactggcgggaccagcatgtttggcagc
acgaccacagacaatcacaaccctatgaaggacatcgaagtcacgtcgtctcccgatgac
agcatcgggtgtctgtccttcagcccgccaaccttgccgggaaactttctcatcgccgga
tcgtgggctaacgatgttcgctgctgggaggtgcaggacaacgggcagaccattcccaaa
gcccagcaaatgcacaccgggcccgtcctcgacgtctgctggagtgatgatggaagcaaa
gtatttacagcatcgtgtgacaaaaccgccaaaatgtgggacctcaacagtaaccaagca
atacagattgcccagcatgacgcgcctgtgaaaaccatacactggatcaaagccccgaac
tacagctgtgtgatgaccggcagctgggataagacgttgaagttttgggatacccggtcg
tcaaatcctatgatggtcttgcagctccccgagaggtgttactgtgctgacgtgatatat
ccgatggccgtagtggcgacagcggagaggggcctgatcgtctaccagctggagaaccag
ccgtccgagttcaggaggatagagtctccgctgaagcaccagcaccggtgtgtggctatt
tttaaagacaaacagaacaagccgactggctttgccctgggcagtatcgaggggagagtc
gcgatccactacatcaaccccccaaaccccgccaaagataacttcacctttaaatgccat
cgatccaatgggaccaatacctccgctccccaggacatctacgcggtgaacggaatctcc
ttccaccccgttcacggcacgctggccaccgtgggctctgacggccggttcagcttctgg
gacaaagatgcgcgcacgaagctcaaaacctcggagcagctggaccagccgatttctgca
tgctgcttcaaccacaacggcaacatattcgcctacgcctccagctacgactggtccaag
ggacatgaattttataatcctcagaagaaaaattacattttcctgcgtaacgctgctgag
gagctaaagcccaggaataagaagtag

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