Cavia porcellus (domestic guinea pig): 100724829
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Entry
100724829 CDS
T07777
Name
(RefSeq) transcription factor SPT20 homolog
KO
K21245
transcription factor SPT20 homolog
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100724829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpoc03036
]
100724829
Chromosome and associated proteins [BR:
cpoc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
100724829
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt20_SEP
REC104
Motif
Other DBs
NCBI-GeneID:
100724829
NCBI-ProteinID:
XP_003466475
LinkDB
All DBs
Position
Unknown
AA seq
708 aa
AA seq
DB search
MQRGLEQALDRADEVIAGAQQRPPARRVPWAEGKSLHEKLYDIYVEECGKEPEVTEELTA
SVHLLEKLVSRESLPCLVFNLYPGDKGYSVMLDDKSGSFVETTSLPYEESKLLEYLDAQQ
LPPVLLDVLDATQVNFFHSGCVIAEIRDYRQCVDPAPSVYKSRHILLRPTMQTLVCDVEA
IARENPRWTQKDKLALESQLILATAEPVCLNPSVAVACTANRLLFNMQKMNTAPMQQCFK
RHSWPALSQQKSSVPSSSPPSTVLTACKKVTENHSNLEHNLKITEQNYIDMWKQRPCDLA
MPSEIDVQKHAKGKESSQSDDELLTFSSPLIPEDNLTFDYETDSQLEDTKPSMLMSNNDP
FWCDRIEPQFLSLKKLKQRAPAATVTSSSRSSSSGQDPPAHPVSSTRKFPPLAPGPKPSS
LSQKPSVTFRGVSSLSAPTQPCASHSGGVIVTQNPASSTNLKVIHVVGPAQRAQVLVSGS
ESMQRSTIGAPTAGGTQPSNLQPSSAGSGGTQPPSQPNVQIILQNAVGLSPVTILQLPPG
SIIVNTPPYPQQQQPLPQIQPQPPSQPQVYQFITQPQPQQPTATLLTQPSPQVSVPGLGN
QQWVLPAGQDIVINLTGEGRFVQPQATVLSQPASGQQISGQDFLSQRVQVPPVGQQRVQG
QRQVQSHHVRYWRRPSSIATTTTQTTGSTYRSHAKGSSKKSPPPTPKP
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgaggcttagagcaagccctagaccgtgcagacgaggtcattgcgggagcccag
cagagacctcctgcaaggagggtcccatgggctgagggtaaatctctccatgagaagctg
tatgacatttacgttgaagaatgtggcaaagagcctgaggtcaccgaggaactcacggcc
agcgtccacttgctagagaagctggtgagcagagagtcattgccatgcttagtgttcaac
ctttacccaggagataaaggctattctgtcatgctggatgacaaaagtgggtcctttgta
gagaccacttcactaccctatgaagagagtaaactgttggagtacttggatgcacaacag
ttaccccctgttttgcttgatgtcctggacgcaactcaggttaactttttccatagtggg
tgtgtcatagctgaaattcgagactacaggcagtgtgtggacccggccccttctgtttac
aaaagtaggcatattctcttacgtccaacgatgcagactttagtgtgtgatgtagaggcc
attgcaagagaaaaccctcgatggacccagaaagacaagctcgctcttgagagccagctg
atcttggctacagcagaacccgtgtgtctgaacccctctgtggcagtagcctgcactgcc
aacagactgctgtttaacatgcagaagatgaatactgcaccaatgcaacagtgtttcaag
cggcattcttggcccgccctgagccagcagaagtcatctgtaccttcttcttcccctccc
tctacagtactaactgcctgcaaaaaagtaacagaaaaccattcgaatctggaacacaac
ttaaagatcacagaacagaattacatagacatgtggaaacagagaccctgtgacctggct
atgccttctgaaatcgatgtgcagaaacatgccaaaggaaaagagtcttcccaatctgat
gatgaactactaacattcagctcacctcttatacctgaggataatcttacgtttgactat
gaaactgacagtcagctagaggacacaaaaccaagcatgctgatgtcaaataatgatcca
ttttggtgtgataggatagagccacaatttctctcactcaagaagcttaagcaaagagct
ccagcagccacagtcacctccagctcaagatcaagttcctcaggtcaagatccccctgca
cacccagtaagcagcacccggaagttcccacctcttgctcctggtcccaagccttccagc
ctttctcagaagccttctgtgactttcagaggagttagctcactttctgctcctacccag
ccctgtgccagccattcaggaggagtcatagtgacccaaaacccagccagctccactaac
ctgaaggtcatccatgtggtgggcccagcacaaagagcccaggttttggtgagtggttca
gagtctatgcagcgcagtaccattggtgcccctactgctgggggaacccagcccagtaac
cttcagccgtccagtgcagggtcaggtgggacacagccaccctctcagccaaatgtgcaa
atcattttacaaaatgctgttggtctctcacccgtaactatactccagcttccacctggt
tccatcattgtgaacaccccaccctacccacagcagcagcagcctctgccccaaatccaa
ccccaacctccctcccagccccaggtgtatcagttcattacacagccacagcctcagcaa
cccacagcgactcttctcacacagcccagcccacaggtttctgtcccgggtctgggcaac
cagcagtgggtcttgcctgctgggcaagatattgtgatcaaccttactggagaagggcgt
tttgtgcagccccaggcaactgtgttgagtcagcctgcctctggacagcaaatatctggg
caagatttcctttcccagagagtccaagtccctcctgttgggcaacaacgggtgcaggga
cagaggcaggtgcagagtcaccatgtgagatactggcggcgtccatcatctatagcaaca
acaaccactcagaccactggcagcacctatcgtagccatgccaaaggtagctccaaaaaa
agcccaccacccaccccaaagccctga
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