Cavia porcellus (domestic guinea pig): 100724852
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Entry
100724852 CDS
T07777
Symbol
Ddx4
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX4
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpoc03036
]
100724852 (Ddx4)
Enzymes [BR:
cpoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100724852 (Ddx4)
Chromosome and associated proteins [BR:
cpoc03036
]
Eukaryotic type
Gene silencing
piRNA pathway
100724852 (Ddx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Utp25_C
Motif
Other DBs
NCBI-GeneID:
100724852
NCBI-ProteinID:
XP_005003851
Ensembl:
ENSCPOG00000004327
LinkDB
All DBs
Position
Unknown
AA seq
661 aa
AA seq
DB search
MGDEDWEAEIVKPHVSSYVPVFEKDKYSSGTDGDRISASSGICQEMDDGSSQQDHFMRSH
FASGRSLGNRETLNKREHTPTVGRFVVGKGFRNKGFSNKFEEGDNCGFLKESNNDCEDNQ
TRNRGFSRRGGYQDGNDAEASGPSRRGGGRGSFRGCRGGFGIGRSNNEYDQAEGAQRPAG
LFGSRRTAVSGTGNGDPYHSRSGSGRGRGGYKGLNEEVITGSGKNSLKSEAEGESGDIQG
PKVTYIPPPPPEDEDSIFAHYQTGINFDTYDTILVXVAGHDAPAANQAAFLLPILAHMMR
DGITASRFKELQEPECIIVAPTRELINQIYLEARKFSYGTCVRAVVIYGGTQLGHSIRQI
VQGCNILCATPGRLMDIIGKEKIGLKQVRYLVLDEADRMLDMGFGPEMKKLISCPGMPTK
EQRQTLLFSATFPEEIQRSVTFLRLSKLGDIKQILDQFIWDSLTKKVQVIQNVGDERTMV
FVETKKKADFIATFLCQEKVSTTSIHGDREQREREQALGDFRSGKCPVLVATSVAARGLD
IENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDPESDNHLAQPLVKVLSDAQQ
DVPSWLEEIAFSTYVPGFSGSTRGNVFASVDTRKNYQGKNTLNTAGFSSQAPNPVDEESW
D
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgggagatgaagactgggaagcagaaattgtcaaacctcacgtgtcttcctacgttcct
gtgtttgagaaggataaatattcttctggaacagatggagacaggatttcagcttcatca
ggtatatgtcaggaaatggatgatggatcatctcaacaagatcatttcatgagaagccac
tttgcctctgggaggagtttgggaaatagagagactcttaacaaaagagaacatactccc
acagtgggtagatttgtagtgggaaagggttttagaaacaaaggtttttcaaataagttt
gaagaaggtgataactgtgggttcttgaaagaatctaataatgactgtgaagataatcaa
acacggaacagagggttttccaggagaggcggctatcaagatggaaatgatgcagaagct
tcaggtccatctagaagaggaggtggaagaggtagtttccgaggttgccgtggaggattt
ggcataggaagatcaaataatgaatatgaccaagctgagggagcacagcgccctgctggc
ctttttgggtctagaagaacagcagtgagtggtacaggtaacggtgatccttaccacagc
agaagtggcagtggacgtggacgaggtggttacaaaggtttaaatgaagaagtaataaca
ggctctggaaagaattctttgaagtcagaagctgaaggagaaagtggtgatattcaaggg
ccaaaagtgacctacataccaccacctccaccagaggatgaagactccatctttgcacat
tatcagacaggcataaactttgacacgtatgacactattcttgtgtaagttgctggacat
gatgcaccagcagcaaatcaggcggcttttctcttgccaattttggctcacatgatgcgt
gatggaataactgccagtcggtttaaagagctacaggaaccagagtgtattattgtagca
ccaactcgagaattgatcaatcagatttatttggaagccagaaaattttcttatgggacc
tgtgtaagagctgttgtcatatatggaggaacacagttggggcattcaatccgacaaata
gtacaaggctgtaacatattatgtgctactcctgggagattgatggatatcataggaaaa
gaaaagattggactcaagcaagtgagatatttagttttggatgaagcagataggatgttg
gatatgggttttgggccagaaatgaagaagttaatttcttgcccaggaatgccaacaaag
gaacaacgtcaaactcttttgttcagtgcaacttttccagaggaaattcaaagaagtgtg
actttcctccggctctccaaactaggcgatataaagcaaatactagaccagtttatttgg
gacagcctaacaaaaaaggtacaagtaatacagaatgtaggtgatgaaagaactatggtc
tttgttgaaaccaagaaaaaagcagattttatcgcaacctttctttgtcaagaaaaagta
tctactacaagtattcatggtgaccgggaacagagagagagagaacaagctcttggagat
tttcgcagtggaaaatgccctgttcttgttgctacttcagtagctgccagagggctagac
attgaaaatgtccaacatgttatcaattttgatcttccttctaccattgatgaatatgtt
catcgaattgggcgtactgggcgttgtggcaatactggaagagctatttctttttttgat
cctgaatcagataatcatttagcacagcctctagtgaaagtgttgtcagatgctcaacaa
gatgttccttcgtggttggaagaaattgcctttagtacatatgttcctggcttcagtggt
agtacaagaggaaatgtgtttgcatcagttgatactagaaagaattaccagggcaagaac
actttgaatacagcagggttttcttcacaagctcccaatccagttgatgaagagtcatgg
gattaa
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