KEGG   Cavia porcellus (domestic guinea pig): 100725059
Entry
100725059         CDS       T07777                                 
Symbol
Larp1b
Name
(RefSeq) LOW QUALITY PROTEIN: la-related protein 1B
  KO
K18757  la-related protein 1
Organism
cpoc  Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:cpoc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpoc03019]
    100725059 (Larp1b)
Messenger RNA biogenesis [BR:cpoc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     100725059 (Larp1b)
SSDB
Motif
Pfam: LARP1_HEAT La
Other DBs
NCBI-GeneID: 100725059
NCBI-ProteinID: XP_023416127
LinkDB
Position
Unknown
AA seq 966 aa
MSARAPGPAAPRREDPPAVAANREPLLSSVSRQAEQPPPPEPDGGEVARAERVAAALSAG
ARGEPSPASVLGRSVPQAAVPVRPLALHLAHKARGSGGPSAGEPPTPPPTLPPRGPPAED
AREELPAAVPVEKLQPPPPKENPWTKKPPQHLAPPAPEPSPPPPDAPGAELSSPKLVKAG
MLKTKKSNKASDFSDMALWPTPGELVNTGFQSVLSQGNKKPQIRKEKEEKVEKRSNSESK
ENRETKLNGPGENVSEDEAQSSNHRKRANKHKWVPLHLDDLRPDSQERPGSRNNSRCQAE
ANKSAHNNRRNDTRSWRREREKREDQDEVSSVRSEGGTIRGSFRGRGRGRGWGRGRGRGN
SRRMTYFFVLFHEYYFSIENLERDFFLRRKMDEQGFLPISLIAGFHRVRALTTNLNLILE
ALKDSTEVEIVDEKMRKRVEPEKWPIPGPPPRTVPQTDFSQLIDCPEFVPGQAFCSHTES
APNSPRIGSPLIPKKNTETSSLQAMFRGLSTSLPDLDSEPWIEAKMRHHVSPVELKESVS
RPEEASNQXCLPEEKIQKELDSLFEEEMEXNGXKKTFTDWSDNDRDYEIDARDLNRILIV
TRXPYMRKLSGNXAGYHMSQAKLTSDVAKVISDGLYYYEEDLWMDEDEKHAAIKDYGLKP
LQTSTRKRKTKHSARPPLECHVGWVMDSRDHRPRTSSVSSSNPSPSEAASLVGSCGCAPH
PLPKFQHPSHELLKENGFTQQMYHKYRLRCLSERKRLGIGQSQEMNTLFRFWSFFLRDHF
NKKMYEEFRQLAWEDAKENYRYGLECLFRFYSYGLEKNFRQEIFKDFQEETKKDYESGQL
YGLEKFWAYLKYSQSKTHSVDPKLQEYLCSFKKLEDFRADPPISEESGRKTPTSTSAEEN
NSHRLVSGSSAKAAATAQLTSSAQPPVPSPRLRSSQASGRSSPQDQDLTAAADPTNPTNG
EIPLEK
NT seq 2901 nt   +upstreamnt  +downstreamnt
atgtccgctcgcgccccggggcccgccgctccgcgtcgggaagacccgcccgcggtggcc
gccaaccgggagccgctgttgagctcggtgagccggcaggccgagcagccgccccctccg
gagccagacggcggggaggtggcgagggcggagcgcgttgcggccgccctcagcgcgggg
gcgcggggcgaaccgtctccggcctcggtactggggcgcagcgtgcctcaggcggccgtg
cccgtgcggcccctggcgctgcacctggcacacaaggcgcgcggctccgggggcccctcg
gccggggagccccccaccccgccgcccacgctcccgccacggggtccgccggccgaggac
gcccgagaggagctgcccgctgcggtcccggtggagaagctgcagccgccgccgcctaaa
gagaacccgtggaccaaaaagccgccacaacaccttgccccccccgcgccggagccgtcg
ccgcccccgccggacgccccgggagcagagctcagttccccaaaacttgtaaaagcagga
atgttgaagacaaagaaatccaataaggccagcgatttcagcgatatggctctttggcca
acaccaggtgaattagtgaacactggatttcagagtgtcctaagccaaggaaataagaag
cctcaaattagaaaagaaaaagaagagaaggtcgaaaagagaagtaacagtgagagcaaa
gaaaacagagaaaccaagttaaatggtcctggtgaaaatgtgagtgaggatgaggctcag
tcaagtaaccatcggaagagagctaataagcacaagtgggtaccactccacttagatgat
cttaggccagacagtcaagaaagacctggatcccggaataattcaagatgtcaagctgaa
gcaaataagtcagcacacaataataggcgaaatgatacacgaagttggcggcgagaaaga
gaaaaaagagaagatcaagatgaagtatccagtgtgagaagtgagggtggtactatccga
ggttccttcagaggccgaggaagaggccgaggatggggaagaggacgaggcagaggaaat
tctcgacgtatgacatacttttttgttttgtttcatgaatattactttagtatagaaaat
ttggaacgagatttctttcttcggaggaaaatggatgaacaaggtttcttgcctatttcc
cttattgctggttttcaccgagttcgggctcttaccacaaaccttaatctcatcttagag
gcgctgaaggatagcacagaagttgaaattgtagatgagaaaatgagaaaaagagtagaa
ccagaaaaatggccaattccaggccctcctccacggactgtgccgcaaacagatttctct
caactgattgattgtccagagtttgtaccaggccaagctttttgctcacatacagagtct
gccccaaattctccaagaattggaagtcctttgattccaaagaaaaatactgaaacaagt
agtcttcaagcaatgtttagaggtttgtctaccagtttacctgacttggattcagaacct
tggatagaagcaaaaatgaggcatcatgtgtccccagtggaattaaaggaatcagtatct
agacctgaagaggcatcaaatcaatagtgtcttccagaagaaaaaatacaaaaagaactt
gattctctatttgaggaagagatggaantaaatggatgaaaaaagacgtttactgattgg
tctgataatgatagagattatgaaattgatgcccgggatttaaacaggattttgattgta
actcggncaccttatatgagaaaactttctggaaattgagcaggctaccacatgtctcag
gcaaaacttacatcagacgttgctaaagttatcagtgatggtttatattactatgaggag
gatttgtggatggatgaagatgaaaaacatgcagcaataaaggattatggactgaaacct
ctacaaactagcacaagaaagagaaagacgaagcacagtgcacgtccccctctagagtgt
catgttggttgggtgatggattccagagatcacaggcccagaacatcctctgtcagcagt
tcaaacccttcaccttcagaagctgcatcacttgtggggagctgtggatgtgccccccac
ccactccccaagttccagcacccttctcatgaacttttgaaggaaaatggctttacccaa
caaatgtatcacaagtatcgcctaagatgtctaagcgaaagaaaacgcttgggaattgga
cagtcccaagaaatgaataccctctttcgtttctggtcctttttcctcagagatcacttc
aataaaaaaatgtatgaggaatttagacaacttgcttgggaagatgcaaaagaaaattac
aggtatgggttagaatgtctgttcaggttttatagttacggactggaaaaaaatttcaga
caagaaatttttaaggatttccaagaagaaaccaaaaaagattacgaatctggtcagctg
tatggactagaaaaattttgggcctatctgaaatactctcaatctaagacacattctgtt
gacccaaagcttcaagaatacctctgtagttttaagaagttagaagacttccgcgctgat
cctccgattagtgaggaatcgggaaggaaaacgcctacatctacctctgccgaggagaat
aatagtcacagacttgtgtccggctcctccgcaaaggctgccgccaccgcccagctgact
tccagcgcgcagcctccggtgccctctcccagactgcgctcttcccaggcctcgggccgc
agctcaccccaggaccaggacctcactgctgctgccgacccaacgaacccaacgaacggt
gaaattcccctggagaaatag

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