Cavia porcellus (domestic guinea pig): 100725232
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Entry
100725232 CDS
T07777
Symbol
Nup107
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup107
KO
K14301
nuclear pore complex protein Nup107
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03013
Nucleocytoplasmic transport
cpoc05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100725232 (Nup107)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100725232 (Nup107)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoc03019
]
100725232 (Nup107)
03036 Chromosome and associated proteins [BR:
cpoc03036
]
100725232 (Nup107)
Messenger RNA biogenesis [BR:
cpoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100725232 (Nup107)
Chromosome and associated proteins [BR:
cpoc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100725232 (Nup107)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup84_Nup100
DUF2310
HisK_sensor
Phage_int_M
Motif
Other DBs
NCBI-GeneID:
100725232
NCBI-ProteinID:
XP_013014953
Ensembl:
ENSCPOG00000008635
LinkDB
All DBs
Position
Unknown
AA seq
927 aa
AA seq
DB search
MTVLSGFGEMLSPVIREPEVTRTARKQSAQKRLLIRSSHDENLANSTPRNQMIPRTPSLF
RQPFTPPNRSLPKHPDISCILGTEGRSPQLTQSSGFLGNLSMVTNLDDSNWAAGFAARHL
GLFTKTEPNNVTEEISAVMLREDDPGEAASSSMFPDFLQSFLKHSLSTVFDLVEEYENIC
SSQVSILSKMVSRATPGLQKFSKTASMLWLLQQEMVTWRLLVSLYRDRIQSSLQNGNILT
TPVSGTKDKNTIYKSNVHSXCXSFSSXMVVDWLESIAKEEIGDFSDNIEFYAKSVYWENT
LHSLKQRQLASSIGSARPLVTELDPDAPIRQKMPLDDLDREDEIRLLKYLFTLIRAGMTD
EAQRLCKRCGQAWRAATLEGWKLYHDPNINGEIGAELEPVEGNPYRRIWKISCWRMAEDE
HFNKYERAIYAALSGNLKQLLPVCDTWEDTVWAYFRVMVDSLVEQEIRLSVMPQNETEEL
PREYLEANWTLEKVFEELQATDKKRVLEENQEHYHIVQKFLILGNIDGLMDEFSRWLSKS
RSKLPGHLLRFMTHLILFFRTLGLQTKEEVSVEVLKTYIQLLIDEGNTHLIAFYCCHLPQ
DLAVAQYALFLESVTEFEHRHISLELAREADLDXATITKTVVENIRKKNNGEFSPHDLSP
DQDSDTTQEDRVKIDVIDWLLFDPAQRSEALKQGNAIMRKFLALKKHEAAKEVFVKIPRD
SIAEIYNLWEERGTHNSLPAEIDNAVREHLCIRAYLEAHETFTEWFNHMNAAPQKPTLMS
QPSFTEQVAYEHKEKKYEMDYDIWKGHLDALTADVKEKMYNVLLFVDGGWMVDVREDPEE
DHERTHQMVLLRKLCLPRLCFLLHTILHTTGQYQECLQLADMVSSERHKLYLVFSKQELK
KLLQKLRESSLMLLDQGLDPLGYEIQS
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcctgagcggttttggagagatgttgtcgcctgtgatccgagagccagaagtg
acacggactgcacggaagcagagtgcacaaaaaagacttttgattcgaagttcccatgat
gaaaatcttgccaatagtacaccaagaaaccagatgattcctcgaactcctagcttattt
cgacagcctttcactccaccaaaccgaagcttaccaaaacatccagatatttcctgcatt
ttgggaacagaagggcggtctcctcagcttacacagtcttcagggtttttgggaaatctg
tccatggtaacgaatctggatgacagtaactgggcagctggattcgcagcgcggcattta
gggctcttcacgaaaacagagcccaacaatgtcacagaggagatcagtgcggttatgtta
cgtgaagatgatcctggagaagctgcatcctcaagcatgtttcctgatttcttgcaatct
tttttgaagcattctttatctacagtttttgacctcgtggaagaatatgaaaatatttgt
agcagtcaggtgagtatactgagtaagatggtgagcagagcaacgcctggactacagaag
ttttccaaaacagctagtatgctctggcttcttcagcaggagatggtcacctggaggcta
ctggtttctttgtacagagacaggatacagtcttcgttacaaaatggaaatatactcaca
actcctgtaagtgggacaaaggataagaataccatttataaatcaaatgttcatagttaa
tgctaatctttttcctcctagatggtggtagattggttggagagtattgccaaagaagaa
attggggatttttctgataatattgaattttatgcaaaatcagtatattgggaaaatacc
ctccacagtttaaaacaacggcagctagcttcttccataggaagtgcccgtcctcttgtc
actgaattggatcctgatgctcccataagacagaaaatgccccttgatgatctggataga
gaagatgaaattcgattacttaaatatctcttcactctaatccgtgctggaatgacagat
gaggcacagcgtctctgtaaacgttgtggtcaggcatggagagctgcaacactggaaggc
tggaaactataccatgaccctaatattaatggagaaataggagcagaattagaacctgtt
gaagggaatccatatcgacgcatttggaaaattagttgctggagaatggcagaagatgaa
cattttaataaatatgagagagcaatttatgcagctttaagtgggaatctcaaacagctt
cttcctgtctgtgacacctgggaagacactgtatgggcctacttccgagtgatggtggac
agtctggtggagcaggagatccggctgtcagtgatgccccagaatgaaactgaagaactc
ccgagagagtatttagaagcaaattggaccttagaaaaggtttttgaagaacttcaagct
actgataaaaagagagttctggaagagaatcaagaacattaccatattgttcaaaaattc
cttatcctgggaaacattgatggtttgatggatgagttcagcagatggctttctaaaagc
agaagcaaactccctggtcatcttctccgcttcatgactcatctcattttgtttttccgc
actctgggattacagaccaaagaagaagtttcagttgaagttttaaagacatacatacag
cttttaatagatgaggggaatacacatctcatagcattttactgctgtcatctgcctcaa
gaccttgctgttgctcagtatgccttatttttggaaagtgtcacagaatttgaacatcgc
catatttctctggagctggctcgggaagcagatttggacngtgcaacaataacaaaaaca
gtagttgagaatattcgaaagaaaaataatggtgaatttagtcctcatgacttgagccca
gaccaggacagcgacactactcaggaggaccgtgtgaaaatcgatgtcattgactggttg
ttatttgacccagcacagaggtcagaagcactgaaacaaggcaatgcaataatgaggaaa
ttcctagcattaaaaaaacatgaagctgcaaaagaagtatttgtgaaaattcctcgggat
tctatagcagaaatctataatctgtgggaggaaaggggaacccacaattcacttcctgcc
gaaattgataatgctgtcagagaacatttgtgcattagagcttatttggaagcccatgaa
acctttactgagtggtttaaccatatgaatgcagctccacaaaaacctactttgatgtcc
cagccaagttttactgaacaagtagcttatgaacataaagaaaagaaatatgaaatggac
tatgatatttggaagggacatttggatgccctaacagctgatgtcaaggagaaaatgtac
aatgtcttgttgtttgttgatggagggtggatggtagatgtccgagaggatccagaggaa
gaccatgaaaggacacatcagatggtcttactgaggaagctttgtctgccaagactgtgt
tttctgcttcacaccatactgcacaccacgggtcagtaccaggagtgcctgcagttggca
gacatggtgtcctccgagcgccacaaactctacctggtattttctaagcaagaactaaag
aaattgctgcagaagttaagggaatcctctctcatgcttctggaccaaggacttgaccca
ttagggtatgaaattcagtcataa
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