Cavia porcellus (domestic guinea pig): 100725329
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Entry
100725329 CDS
T07777
Symbol
Dhx36
Name
(RefSeq) ATP-dependent RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100725329 (Dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoc03019
]
100725329 (Dhx36)
03012 Translation factors [BR:
cpoc03012
]
100725329 (Dhx36)
Enzymes [BR:
cpoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100725329 (Dhx36)
Messenger RNA biogenesis [BR:
cpoc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
100725329 (Dhx36)
Translation factors [BR:
cpoc03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
100725329 (Dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
AAA_22
AAA_19
nSTAND3
PhoH
ATPase
NPHP3_N
NACHT
AAA_34
AAA_25
AAA_16
AAA_23
Motif
Other DBs
NCBI-GeneID:
100725329
NCBI-ProteinID:
XP_013015098
Ensembl:
ENSCPOG00000007716
LinkDB
All DBs
Position
Unknown
AA seq
927 aa
AA seq
DB search
MSYDYHQNWGRDGGSRSTSGGSGGGHGGSRGTGGGGGGGGGRGGRGRHPGHLKGREIGLW
YAKKQTQKNKEAERKERAVVHMDERREEQIVQLLNSVQTKNDKDPEAQISWFAPEDHGYG
TEVSADNKSTSEKKLDNQENKLINQEKKTLRFRDRSYIDRDSEYLLQENEPDLTLDQQLL
EDLQKKKTDRRYIEMQRFREKLPSYGMQKELVDLIDKHQVTVVSGETGCGKTTQVTQFIL
DNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQG
SILYCTTGIILQWLQSDPHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNSRSDLKVILM
SATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRYIPEQKEHRSQFKRGFMQG
HVNRPEKEEKEAIYKERWPDYVRELRRRYSANTVDVLEMMDDDKVDLNLIAALIRYIVLE
EEEGAILVFLPGWDNISTLHDLLMSQVMFKSDKFIIIPLHSLMPTVNQTQVFKRTPPGVR
KIVIATNIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGR
VQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGRIAYFLSRLMDPPSND
AVLLSIRHLMELDNINRFLHLSQGWEEAKRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQF
AEHLLAAGFVSSRNPKDPKANINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVHT
KTDGLVSIHPKSVNVEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQK
DNEQETIAVDEWIIFQSPAKIARLVKDLRKELDTLLQEKIESPHPVDWKDTKSRDCAVLS
AIIDLIKTQEKATPRNLPPQAQDGYYS
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgattaccatcagaactggggccgcgatggcggttcgcgcagcaccagcggt
gggagtggtgggggccacggaggcagtcgaggcactggaggcggcggaggaggaggaggt
ggtcgaggcggaaggggtcggcatcctgggcacttgaaaggccgcgaaattggcttgtgg
tacgcgaaaaaacagacccagaagaacaaggaggcggagaggaaggagagagcagtagta
cacatggatgaacgacgagaagagcaaattgtgcagctgctaaattctgtccaaactaaa
aatgataaagatccagaagcgcagatatcctggtttgccccagaggatcatggatatggg
actgaagtttctgctgataataagtcaacctcagagaagaaacttgacaatcaggaaaat
aaattgataaaccaagaaaaaaagacattaagattcagagacagatcatatattgatcgg
gattctgaataccttttgcaagaaaatgaaccagatctaaccttagaccaacaattacta
gaagatttacagaagaaaaaaactgatcgtcggtatattgaaatgcagcgtttcagggaa
aagcttccttcatatggaatgcaaaaggagttggtagatttaattgataaacaccaggta
acagtagtaagtggtgaaactggttgtggaaaaactactcaagttactcagttcattttg
gataactacattgaaagaggaaaaggatctgcctgcagaatagtttgtactcagccaaga
agaatcagtgctatttcagttgcagagagagtcgctgcagaaagagcagagtcttgtggc
aatggtaatagtaccggataccaaattcgtctccagagtcgattgccaaggaaacagggt
tctatcttatactgtacaacaggaatcatccttcagtggctccagtcagacccgcatttg
tccagtgttagtcatatcgtactagatgaaatccatgaaagaaatctacagtcagatgta
ttgatgactgttattaaagatcttctcaattctcgttctgacttgaaagtgatattgatg
agtgccacattgaatgctgagaaattttcagaatactttggcaactgcccaatgatacat
atacctggatttacttttccagttgtagaatatcttttggaagatataattgaaaaaata
agatatattccagagcaaaaggaacacagatcccagtttaagagaggtttcatgcaaggg
catgtaaataggccagaaaaagaagaaaaagaagcaatttataaagaacgctggccagat
tatgtgagggagctgcgaagaaggtactctgcaaatactgtagatgttttagaaatgatg
gatgatgataaagttgatctgaatttgattgcagccctaatccggtacattgttttggaa
gaagaggagggtgcaatcctggtctttctgccaggctgggacaatatcagtactttacat
gatcttttgatgtctcaagtgatgtttaaatcagataaatttatcattataccgttacat
tcactgatgcctacagtaaatcagacacaggtatttaaaagaactcctcctggtgttcgg
aaaatagtaattgccaccaacattgcagaaactagcattaccatagatgatgtagttttt
gtgatagatggaggaaaaattaaagagacacattttgacactcagaacaacatcagtaca
atgtctgctgagtgggttagtaaagccaatgccaaacagaggaaaggtcgagctggaaga
gttcaacctggtcattgctatcatctatataatggtcttagagcaagtcttctagatgat
tatcaactaccagaaattttgagaactcctttggaagaactttgtttgcaaataaagatt
ttaaggctcggtagaattgcttattttctaagtaggttaatggatccaccatcaaatgat
gctgtgttgctctccataagacatctaatggaactggacaatataaacagatttctacat
ttgtctcagggatgggaagaagctaagcgacgtggtttcagatatgagaaagactattgc
tgggaatacttcctgtcttcaaacacactgcagatgctgcataacatgaaaggacagttt
gctgagcatcttcttgcagctggatttgtaagcagtagaaatcctaaagatccaaaggca
aatataaattcagataatgagaagataattaaagctgtcatctgtgctggtttatatccc
aaagttgctaaaatccgactaaatttgggtaaaaaaagaaaaatggtgaaagttcacaca
aaaacggatggcctggtttctattcatcctaaatctgttaatgtggagcaaacagacttt
cattacaactggcttatctatcacttgaagatgagaacaagtagtatatacttgtacgac
tgcacagaagtttctccttattgtctcttgttctttggaggtgatatttccatccagaag
gataatgaacaggagactattgctgtagatgaatggattatatttcagtctccagcaaaa
attgcccgtcttgttaaggacttaagaaaggaactagatacccttcttcaagagaagatt
gaaagtcctcatcctgtggactggaaagacactaaatctagagactgtgcagtactgtca
gctataatagacttgatcaaaacacaggaaaaggcaactcccaggaacttgccaccgcaa
gcccaggatggatattacagctga
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integrated database retrieval system
