Cavia porcellus (domestic guinea pig): 100726071
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Entry
100726071 CDS
T07777
Symbol
Whrn
Name
(RefSeq) whirlin isoform X3
KO
K21879
whirlin
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cpoc03037
]
100726071 (Whrn)
Cilium and associated proteins [BR:
cpoc03037
]
Primary cilia and associated proteins
USH complex and associated proteins
100726071 (Whrn)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
HHD_RTEL1
T15H9-4_C
USH1C_N
CCM2_C
PAH_ZNF598
DUF1722
Motif
Other DBs
NCBI-GeneID:
100726071
NCBI-ProteinID:
XP_003478894
Ensembl:
ENSCPOG00000000760
UniProt:
A0A286XE05
LinkDB
All DBs
Position
Unknown
AA seq
905 aa
AA seq
DB search
MNAQLDGLSVSSSSTGSLGSGAVAGGGGGTGLRLLSANVRQLHQALTALLSEAEREQFTH
CLNAYHARRNVFDLVRTLRVLLDSPVKRRLLPMLRLVIPRSDQLLFDQYTAEGLYLPANA
PYRQPSWGGPDGAGPGEVRLVSLRRAKAHEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKE
GLRVGDQILRVNDKSLARVTHAEAVKALKGSKKLVLSVYSAGRIPGGYVTNHIYTWVDPQ
GRSISPPSGLPQPHSSTLRTHEGDRRSGLQLLQGGDEKKVNLVLGDGRSLGLTIRGGAEY
GLGIYITGVDTGSEAESSGLKIGDQILEVNGRSFLNILHDEAVKLLKSSRHLILTVKDVG
RLPHARTTVDETKWIASSRIGESAAGLPGFPGDLTTEGANKPGFYKGPAGSQVTLSSLGN
QTRVLLEEQARHVLNGQERATMAYYLDQYRNGSISVEALVTALFELLNTHAKFSLLSEVR
GIISPQDLDRFDHLVLRREIDSMKARQPPGPGAGDTYSMVSYSDTGSSTGSHGTSTTVSS
ARNTLDLEETGEAVQGGAGALPDVSVDDVRSPSEGLPSIRPPPPLPPLAQGHDCPFGQLR
KPGKEDPTAPHSSSSHSGTVFSAAQNHSPPRGTAPTQGASAQDSPSSPIYASVSPANPGS
KRPLDAHLALVNQHPIGPFPRVQSPPHLKSTPTEIPAGGCLLPPSPSDPPDQMGTNQHFV
MVEVHRPDSEPDVNEVRALPQTRTASTLSQLSDSGQTLSEDSGVDAGEVEASASGQSRQM
ASTKSRSSKELPRSERTTEGGHKPPGLLEPTSTLIRVKKSAATLGIAIEGGANTRQPLPR
IVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKTKDRDYIDFLVTE
FNVML
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgcaactggacggcctgtcggtgagctcgtcctccaccggctcgctgggctcg
ggggccgtggcgggcggcggcgggggcacagggctgcggctgctgtctgccaacgtgcgc
cagctgcaccaagcactgaccgctctgctaagcgaggcggagcgggagcagttcactcac
tgcctgaacgcttaccacgcgcgccgcaacgtcttcgacctggtgcgcaccctgcgcgtc
ctgctggacagcccggtcaagcggcgcttgctgcccatgctgcgtctggtcatcccgcgc
tctgaccagctgctcttcgaccagtacaccgctgagggcctctacctgcctgccaacgcc
ccctacaggcagccctcctggggcggcccagacggtgcgggccccggggaggtgcgtctg
gtgagcctgcgacgagccaaggcccacgaaggcttgggcttcagcatccgcgggggctcg
gagcatggcgtgggcatctacgtttccctggtggagccaggttccttggccgagaaggaa
gggctgcgagtcggggaccagattctgcgtgtcaacgataaatccctggcccgggtgaca
cacgcggaggctgtcaaggctctgaagggctccaagaagctggttctgtctgtgtactca
gcggggcgcatccccgggggctatgtcaccaatcacatctacacctgggtggacccgcag
ggccgcagcatctctccaccctctggcctgccccagccccacagcagcaccctgagaaca
cacgagggtgaccggaggagtggcctgcaactcctgcaaggcggggatgagaaaaaggta
aacttggtgctgggagatggccggtccctaggcctcacgatccgcgggggagctgagtat
ggccttggcatttacatcactggcgtggacacaggctcggaagcagaaagcagtgggctc
aagatcggggaccagatcctggaggtgaacgggcggagctttctcaacatcctgcacgat
gaggcagtcaagctgctcaagtcatctcgacacctcatcctgaccgtgaaggacgtgggg
aggctgccacatgcacgcaccacagtggatgagaccaaatggattgccagttcccggatc
ggggagagtgcagcaggcttgccagggtttccaggggatctcaccacagagggggcaaac
aagccaggattttacaagggcccagctggctcccaggtgaccctgagcagcctagggaac
cagacacgtgtgctgctggaggagcaggcccgacacgtattgaatgggcaggagcgcgcc
accatggcctactacctggaccagtaccgcaatggcagcatctctgtggaggccctcgtc
accgccctgttcgagctgctcaacacccatgccaagttctcactcctctctgaagtgaga
ggcatcatctccccacaagacctggaccgctttgaccacctggtactgaggcgggagatc
gattccatgaaggcaaggcagcctccaggccctggggctggggacacctactccatggtt
tcctacagtgacacgggctcatccaccggaagccacggcacctccaccactgtcagctcg
gccaggaacacgctggacctggaggaaaccggcgaggccgtgcagggcggggccggtgcc
ctccccgacgtgtccgtggacgatgtcagatccccctccgagggactgccaagcatcagg
ccaccgcctcccctgccacctctggcccaaggccatgactgcccatttggccagctgagg
aagccggggaaggaggaccccacagctccccactcttcatcttcccactcgggcaccgtc
ttctccgcagcccagaaccacagcccaccccggggcaccgcacccacccagggggcttct
gcccaggactcgccctcctcccccatctatgcctctgtctccccggccaaccctggatcc
aagaggcctctggacgctcacttggctctggtcaaccagcaccccatcgggcccttccct
cgggtccagtcaccaccgcacctgaagagcacccccacagagatcccagcaggggggtgc
ctcctgccaccctcaccctctgaccccccagaccagatgggcaccaaccagcactttgtc
atggtggaggtgcaccgtcccgacagcgagcctgatgtgaacgaagtgcgggccctgccc
cagacgcgcacagcctccacactctcccagctctccgacagtggacagacgctaagtgag
gacagtggtgtggatgccggcgaggtggaggccagcgcctcaggccaaagcagacagatg
gcgtccaccaagagcaggagcagtaaggagctgcctaggagcgagaggaccacagaggga
ggccacaaaccgcctggactcctagagcccacatccaccctgatccgcgtgaagaagagt
gcagccaccctgggcatcgccattgagggtggggccaacacacgccagccactgccaagg
atcgtcacaattcagcgagggggctcagcccacaactgcgggcagctcaaggtgggccac
gtgatcctggaagtgaacgggctgacactccgtggcaaggagcaccgggaggccgcccgg
atcatcgccgaggccttcaagaccaaggaccgtgactacatcgacttcctggtcactgag
tttaatgtgatgctctag
DBGET
integrated database retrieval system