KEGG   Cavia porcellus (domestic guinea pig): 100726071
Entry
100726071         CDS       T07777                                 
Symbol
Whrn
Name
(RefSeq) whirlin isoform X3
  KO
K21879  whirlin
Organism
cpoc  Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:cpoc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:cpoc03037]
    100726071 (Whrn)
Cilium and associated proteins [BR:cpoc03037]
 Primary cilia and associated proteins
  USH complex and associated proteins
   100726071 (Whrn)
SSDB
Motif
Pfam: PDZ PDZ_6 PDZ_2 HHD_RTEL1 T15H9-4_C USH1C_N CCM2_C PAH_ZNF598 DUF1722
Other DBs
NCBI-GeneID: 100726071
NCBI-ProteinID: XP_003478894
Ensembl: ENSCPOG00000000760
UniProt: A0A286XE05
LinkDB
Position
Unknown
AA seq 905 aa
MNAQLDGLSVSSSSTGSLGSGAVAGGGGGTGLRLLSANVRQLHQALTALLSEAEREQFTH
CLNAYHARRNVFDLVRTLRVLLDSPVKRRLLPMLRLVIPRSDQLLFDQYTAEGLYLPANA
PYRQPSWGGPDGAGPGEVRLVSLRRAKAHEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKE
GLRVGDQILRVNDKSLARVTHAEAVKALKGSKKLVLSVYSAGRIPGGYVTNHIYTWVDPQ
GRSISPPSGLPQPHSSTLRTHEGDRRSGLQLLQGGDEKKVNLVLGDGRSLGLTIRGGAEY
GLGIYITGVDTGSEAESSGLKIGDQILEVNGRSFLNILHDEAVKLLKSSRHLILTVKDVG
RLPHARTTVDETKWIASSRIGESAAGLPGFPGDLTTEGANKPGFYKGPAGSQVTLSSLGN
QTRVLLEEQARHVLNGQERATMAYYLDQYRNGSISVEALVTALFELLNTHAKFSLLSEVR
GIISPQDLDRFDHLVLRREIDSMKARQPPGPGAGDTYSMVSYSDTGSSTGSHGTSTTVSS
ARNTLDLEETGEAVQGGAGALPDVSVDDVRSPSEGLPSIRPPPPLPPLAQGHDCPFGQLR
KPGKEDPTAPHSSSSHSGTVFSAAQNHSPPRGTAPTQGASAQDSPSSPIYASVSPANPGS
KRPLDAHLALVNQHPIGPFPRVQSPPHLKSTPTEIPAGGCLLPPSPSDPPDQMGTNQHFV
MVEVHRPDSEPDVNEVRALPQTRTASTLSQLSDSGQTLSEDSGVDAGEVEASASGQSRQM
ASTKSRSSKELPRSERTTEGGHKPPGLLEPTSTLIRVKKSAATLGIAIEGGANTRQPLPR
IVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKTKDRDYIDFLVTE
FNVML
NT seq 2718 nt   +upstreamnt  +downstreamnt
atgaacgcgcaactggacggcctgtcggtgagctcgtcctccaccggctcgctgggctcg
ggggccgtggcgggcggcggcgggggcacagggctgcggctgctgtctgccaacgtgcgc
cagctgcaccaagcactgaccgctctgctaagcgaggcggagcgggagcagttcactcac
tgcctgaacgcttaccacgcgcgccgcaacgtcttcgacctggtgcgcaccctgcgcgtc
ctgctggacagcccggtcaagcggcgcttgctgcccatgctgcgtctggtcatcccgcgc
tctgaccagctgctcttcgaccagtacaccgctgagggcctctacctgcctgccaacgcc
ccctacaggcagccctcctggggcggcccagacggtgcgggccccggggaggtgcgtctg
gtgagcctgcgacgagccaaggcccacgaaggcttgggcttcagcatccgcgggggctcg
gagcatggcgtgggcatctacgtttccctggtggagccaggttccttggccgagaaggaa
gggctgcgagtcggggaccagattctgcgtgtcaacgataaatccctggcccgggtgaca
cacgcggaggctgtcaaggctctgaagggctccaagaagctggttctgtctgtgtactca
gcggggcgcatccccgggggctatgtcaccaatcacatctacacctgggtggacccgcag
ggccgcagcatctctccaccctctggcctgccccagccccacagcagcaccctgagaaca
cacgagggtgaccggaggagtggcctgcaactcctgcaaggcggggatgagaaaaaggta
aacttggtgctgggagatggccggtccctaggcctcacgatccgcgggggagctgagtat
ggccttggcatttacatcactggcgtggacacaggctcggaagcagaaagcagtgggctc
aagatcggggaccagatcctggaggtgaacgggcggagctttctcaacatcctgcacgat
gaggcagtcaagctgctcaagtcatctcgacacctcatcctgaccgtgaaggacgtgggg
aggctgccacatgcacgcaccacagtggatgagaccaaatggattgccagttcccggatc
ggggagagtgcagcaggcttgccagggtttccaggggatctcaccacagagggggcaaac
aagccaggattttacaagggcccagctggctcccaggtgaccctgagcagcctagggaac
cagacacgtgtgctgctggaggagcaggcccgacacgtattgaatgggcaggagcgcgcc
accatggcctactacctggaccagtaccgcaatggcagcatctctgtggaggccctcgtc
accgccctgttcgagctgctcaacacccatgccaagttctcactcctctctgaagtgaga
ggcatcatctccccacaagacctggaccgctttgaccacctggtactgaggcgggagatc
gattccatgaaggcaaggcagcctccaggccctggggctggggacacctactccatggtt
tcctacagtgacacgggctcatccaccggaagccacggcacctccaccactgtcagctcg
gccaggaacacgctggacctggaggaaaccggcgaggccgtgcagggcggggccggtgcc
ctccccgacgtgtccgtggacgatgtcagatccccctccgagggactgccaagcatcagg
ccaccgcctcccctgccacctctggcccaaggccatgactgcccatttggccagctgagg
aagccggggaaggaggaccccacagctccccactcttcatcttcccactcgggcaccgtc
ttctccgcagcccagaaccacagcccaccccggggcaccgcacccacccagggggcttct
gcccaggactcgccctcctcccccatctatgcctctgtctccccggccaaccctggatcc
aagaggcctctggacgctcacttggctctggtcaaccagcaccccatcgggcccttccct
cgggtccagtcaccaccgcacctgaagagcacccccacagagatcccagcaggggggtgc
ctcctgccaccctcaccctctgaccccccagaccagatgggcaccaaccagcactttgtc
atggtggaggtgcaccgtcccgacagcgagcctgatgtgaacgaagtgcgggccctgccc
cagacgcgcacagcctccacactctcccagctctccgacagtggacagacgctaagtgag
gacagtggtgtggatgccggcgaggtggaggccagcgcctcaggccaaagcagacagatg
gcgtccaccaagagcaggagcagtaaggagctgcctaggagcgagaggaccacagaggga
ggccacaaaccgcctggactcctagagcccacatccaccctgatccgcgtgaagaagagt
gcagccaccctgggcatcgccattgagggtggggccaacacacgccagccactgccaagg
atcgtcacaattcagcgagggggctcagcccacaactgcgggcagctcaaggtgggccac
gtgatcctggaagtgaacgggctgacactccgtggcaaggagcaccgggaggccgcccgg
atcatcgccgaggccttcaagaccaaggaccgtgactacatcgacttcctggtcactgag
tttaatgtgatgctctag

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