Cavia porcellus (domestic guinea pig): 100726203
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Entry
100726203 CDS
T07777
Symbol
Pms2
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03430
Mismatch repair
cpoc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
100726203 (Pms2)
03460 Fanconi anemia pathway
100726203 (Pms2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpoc03400
]
100726203 (Pms2)
DNA repair and recombination proteins [BR:
cpoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
100726203 (Pms2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
UfSP_MPN_N
Motif
Other DBs
NCBI-GeneID:
100726203
NCBI-ProteinID:
XP_003470079
Ensembl:
ENSCPOG00000000555
LinkDB
All DBs
Position
Unknown
AA seq
890 aa
AA seq
DB search
MSGRKIRLLLVGVAAGTLAFTGCEKHLSSMELVESTSTEPAKAIKAIDGKSVHQICSGQV
VLSLSTAVKELVENSVDAGATNIDLRLKDYGVDLIEVSDNGCGVEEENFEGLALKHHTSK
IQEFADLTQVETFGFRGEALSSLCALSDVTISTCHTSAKVGTRLVFDHNGKIVQKTPCPR
PKGTTVSVQQLFYTLPVRHKEFQRNIKKEYAKMVQVLHAYCIISAGVRVSCTNQLGQGKR
QPVVCTSGSTSLKDNIGSVFGQKQLQNLIPFVQLPPSDSVCEEFGLSCSDALRSLFHISG
FISPGTHGVGRSATDRQFFFINRRPCDPAKVSRLVNEVYHMYNRHQYPFVVLNISVDSEC
VDINVTPDKRQILLQEEKLLLAILKTSLIGMFDRDVNKLTVSQQPLLDIEGNLIKMRAAE
MEKPLLEKQASSPSLRIQGEEKRVLSVSRLREAFSLRHNTEIKSQGLDSADPKWNSPKQK
GGAPSFGTSDPTSGWAVQGPQEEVTSPKKGPRDSVDPAETEKDSGHSSTPAGSEEGFGTP
ETKSHCSSDQTVSPPKDRFPWDSVDSCEQLLTTDHHPPDMKCHLDQEDVRYKFKGLTDLS
SPNTKRFKKEEIPSAADVPQKLLNTQNVSVTQVDVAIKISKKIVPLTFSMSSLAKRVNQL
HHQKQQNEGEQNYRKFRAKICPGENQAAEDELRKEISKTMFAEMEILGQFNLGFIVTKLK
EDIFLVDQHAADEKYNFEMLQQHTVLQAQRLISPQTLNLTAVNEAILIENLEIFRKNGFD
FVIDESAPVTKRAKLISLPTSKNWTFGPQDIDELIFMLSDSPGVMCRPSRVRQMFASRAC
RKSVMIGTALNTSEMKKLIVHMGEMDHPWNCPHGRPTMRHIANLEVISQN
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgagtgggcggaagataaggctccttcttgtgggagtggcggcgggaactcttgctttt
accggatgcgagaagcatttgtcgtccatggagctagttgagagcaccagtacagaacct
gccaaggccatcaaagctattgatgggaagtcggtccatcagatttgttctgggcaagtg
gtactcagtctcagcactgctgtgaaggagttggtagaaaatagcgtggatgctggtgcc
actaatattgatctaaggcttaaagactatggggtggatctcatcgaagtttcagacaat
ggatgtggggtagaagaagaaaactttgaaggcttggctttgaaacatcacacttctaag
attcaagagtttgctgacctcactcaggttgaaacttttggctttcggggggaagctctg
agctcactctgtgcactgagtgatgtaacaatttctacatgtcacacatctgcaaaagtt
ggaactcgacttgtttttgatcacaatgggaaaattgtccagaaaaccccctgtccacga
cccaaagggacaacagtcagtgttcagcagttattttatacactacctgtgcgtcacaag
gaatttcaaaggaatattaaaaaggagtatgccaaaatggtccaggtcttacatgcgtac
tgtatcatttcagcaggcgtccgtgtaagttgtaccaatcagctcggacaaggaaagcgg
cagcctgtggtgtgcacaagtggcagcaccagcctgaaggacaatattggctctgtgttt
gggcagaagcagttgcaaaaccttattcctttcgttcagctgccccctagtgactctgtc
tgtgaagagtttggcctgagctgttcggatgcactgcgtagtctgtttcatatttcaggg
ttcatctcacccggtacccatggtgttgggagaagtgcaacagatagacagtttttcttc
atcaaccggcgcccttgtgaccctgcaaaggtctccagacttgtgaatgaggtctaccac
atgtataatcgacatcaatatccttttgttgttcttaacatttctgttgattcagaatgt
gttgatatcaatgttactccagataaaaggcaaattttactacaagaagagaagcttttg
ttggctattttaaaaacctctttgataggaatgtttgatcgtgatgtaaacaaacttact
gtcagtcagcagccactgctggatattgaaggtaacttaataaagatgcgtgcagcagaa
atggaaaagcctctgctggaaaagcaggccagttccccttcactaaggattcaaggggaa
gaaaaaagggtcctgtctgtttccaggctccgagaagccttttctcttcgacacaacaca
gagatcaaatctcagggcctggattctgcagatccaaaatggaattctccaaaacagaaa
ggaggtgcaccatcttttggcacctcagatcccacctctggctgggctgtgcagggccct
caggaagaggtgacaagtcccaagaagggccccagggactctgtggaccccgcagaaaca
gagaaggactcggggcatagcagcaccccagctggctctgaggaagggtttggcacccca
gaaaccaaaagtcactgtagcagtgaccaaacagtgagccccccaaaagacagatttcca
tgggacagtgtggactcttgtgagcagctactcacaaccgaccaccatcctcctgacatg
aaatgtcatttagaccaagaagatgtccgatataaattcaaaggtttgactgatctctca
tccccaaacaccaagcgttttaaaaaggaagaaattccttcagctgctgatgttcctcaa
aagttgcttaatactcagaatgtgtcagtgactcaggttgatgtagctattaaaattagt
aagaaaatagtgcctcttaccttttctatgagttctttagctaaacgagtaaatcagtta
catcaccagaaacagcagaatgaaggtgaacagaattataggaaatttagagcaaagatt
tgccctggagaaaaccaagcagcagaagatgaactaaggaaagagatcagtaaaacaatg
tttgcagaaatggagatccttggtcagtttaatttggggttcatagtaactaagctgaag
gaggacatcttcctggtggaccagcacgccgcagatgaaaaatacaactttgagatgctg
cagcagcacactgtgctccaggcacagaggctcatctcacctcagactctcaatttaact
gctgtcaatgaagcgatcctgatagaaaatttggaaatattcagaaagaatggctttgat
tttgtcattgacgaaagtgctccagtcaccaaaagggctaaattgatttccttaccaact
agtaaaaactggactttcggaccccaagatatagatgaactgatcttcatgctaagcgac
agccctggggtcatgtgccggccctcccgagtcagacagatgtttgcctccagagcctgc
cggaagtctgtgatgattggaactgctcttaacacaagcgagatgaagaagcttattgtc
cacatgggcgagatggaccacccctggaactgtccccacggaaggccaactatgaggcac
atcgccaatctcgaagtcatctctcagaactga
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