Cavia porcellus (domestic guinea pig): 100726338
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Entry
100726338 CDS
T07777
Symbol
Ciita
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc04612
Antigen processing and presentation
cpoc05145
Toxoplasmosis
cpoc05152
Tuberculosis
cpoc05164
Influenza A
cpoc05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
100726338 (Ciita)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
100726338 (Ciita)
09171 Infectious disease: bacterial
05152 Tuberculosis
100726338 (Ciita)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
100726338 (Ciita)
09163 Immune disease
05340 Primary immunodeficiency
100726338 (Ciita)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cpoc01001
]
100726338 (Ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cpoc04054
]
100726338 (Ciita)
Enzymes [BR:
cpoc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
100726338 (Ciita)
Protein kinases [BR:
cpoc01001
]
Serine/threonine kinases: Other
TAF1 family
100726338 (Ciita)
Pattern recognition receptors [BR:
cpoc04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
100726338 (Ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
LRR_6
LRR_4
LRR_14
LRR_8
LRR_9
Motif
Other DBs
NCBI-GeneID:
100726338
NCBI-ProteinID:
XP_012997031
Ensembl:
ENSCPOG00000002509
LinkDB
All DBs
Position
Unknown
AA seq
1186 aa
AA seq
DB search
MNHFQTILVQVRALLSSHQPRQVQALLDSLLEEELLSREYHCALLHEPDIETLARKISLT
LLAKADLDLALLGWAWRQLQAPSLERGPGCRNYGGSGQCATMELGPLEGGYLELLNSDVD
PLHHYHLYDQMDLAGEQEIELYSEPDMDTINCDQFSRLLYDMEREEETGDTYPNIGEGTF
WSHPFAMIQSRPVLQKSPQGGSFPEEHPTDLKHRKLAEPFSGPIVTGSFLVGPASDSSPL
SCQPPHALLNQVPDSGQIQLEETVQVPADLSSPLVSCVTLPAGPIQFISTLPTLPQGLWQ
VSGLGTAVSSIFVYHGEMPQAKHTLPASGPAVHSLPKSPTRPGSTSPFAPSAADLPSMPE
PALTSRTDATEDETSPPPCQATAEDAIQLSKWPEAVRQFHHSLQDWHQAEPTEPEVEVDL
LRARLEKGSHKSQERELVIVDWAERQPVSGGLAEVLLAASNRRRLRETQVIAMLGKAGHG
KSHWAQAVGRAWARGQLPQYDFVFYVPCYRLDYPGDTYCLKDLLCSPGPQPLAMDEEVFS
HISRRPERILLILDAFEELEAQDSFLHGAGGPTCTEPCSFRALLAGLLQRRLMQGCTLLL
TAQPRGRLAQVLGKADALFEVTGFSTEQAQTYVTCYFKGSEHREQALMLLQDQPFLLSHS
HSPTLCRAVCQLLETLLQRGEEAKLPSTLTGLYVGLLDRAARDSPPGALVGLAKLAWELG
RRHQSTLREDQFPTEQIRTWAVTKSLVQPVVQQVPGAAEAELAFSSFLLQCFLGALWLAL
SSEIKDKELPQFLALTPRKKRPYDNWMEGVPRFLAGLIFQPRARCLGALVGSAAAASADK
KQKVLTRYLKRLQPRTLQAGRLLELLHCAHEASEAGIWMHVVRELPACLSFLGTRLTPPD
AHVLGQALQAAGRDFSLDLRGTGIDPSGLGNLVGLSCVTRFRAALSDTVGLWESLQQRGE
TQLLQAAEDKFTIEPFKAKSLKDVEDLGHLVQTQRLRSSSEDTVRELPAVRDLKKLEFAL
GPTLGPQAFPKLAKILPAFSSLQHLDLDSLSDNKIGDTGVSQLSATFPQLKALETLNLSQ
NSITDTGACTLAEALPLLSASLLRLSLYNNCICDMGAESLARVLPEMGSLRGMDVQFNKF
TAVGAQQLAASLRKCPRVETLAMWTPTIPFGVQEHLHQLDSRISLR
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacttccagaccatcctggtccaggttcgggcactgctctccagccaccagccg
aggcaggtgcaggctctcctggacagcctgctggaagaggaactcctgtccagggagtac
cattgtgccctgctccatgagcctgacatcgagactctggccaggaagatatccctgacc
ttgctggcaaaggcggacctggacttggctctcttgggctgggcttggagacagctgcag
gccccatcattggagaggggccctggctgcaggaactatggtggcagtggacagtgtgcc
actatggagctggggcctctggaaggtgggtacttggagcttcttaacagtgacgtcgat
cccttgcaccactaccacttatatgaccagatggacttggcaggagagcaagagattgag
ctctactcagagcctgacatggacaccatcaactgtgaccagttcagcaggctgctatac
gacatggaaagggaagaagagactggagatacgtaccccaacattggtgagggcacattc
tggtctcacccatttgccatgatccagagcaggcccgtcctgcagaaatcaccacaaggg
ggatccttcccagaggagcatcccacagacctgaagcacaggaaactagcagagcccttt
tctgggcccatagttaccggcagcttcttggtgggaccagccagtgactcttccccgctg
tcctgccagccaccacatgctctactcaaccaggtgccagactcaggccagatccagcta
gaggaaactgtgcaggtgcctgcggacctctcctcacccttggtgagctgtgtgactctg
cctgctgggcccattcagttcatctccacactcccgactctgccccaggggctctggcag
gtctcagggctgggcacagcagtctccagtatatttgtctatcatggtgaaatgccccag
gccaaacacactctgcctgccagtggccctgctgtccacagcctcccaaagtccccaacc
cggcctggctccaccagccccttcgctccctctgcagctgacttacccagcatgcccgag
ccagccctgacctcccgaacggatgccacagaggatgaaacatcccctccgccatgccag
gcaactgcagaggatgccatccagctttccaaatggcctgaggcagtgaggcagttccac
cactcactgcaggactggcaccaggcagagcccacagagccagaggtggaggtggacctg
ctgagagcccggctagagaagggcagccacaagagccaggagagggagctggtcatcgtg
gactgggctgagcgacaaccagtcagtggcggtctggccgaagtgctgctggctgcaagc
aaccggcggcgactgcgagagacccaagtgattgccatgctgggcaaggcggggcacggg
aagagccactgggcacaggcagtgggccgggcctgggcccgtggccagcttcctcagtat
gactttgtcttctatgtgccctgctaccgcttggactacccaggggatacctactgccta
aaggatctgctctgctccccaggccctcagccactggccatggatgaggaagtcttcagc
cacatctccaggaggcctgagcgcatcctgctcatcctggatgcctttgaggaactggaa
gctcaggacagctttctgcatggtgctggcgggcccacgtgcacagagccctgctccttc
cgggcgctgctggcagggctcctgcagcgcaggctgatgcaaggctgtaccctgctcctc
acggcccagccccgtggccgcctggcccaggtcctgggcaaagctgatgctctgtttgag
gtgactggtttctctactgaacaggcacagacatatgtaacgtgctacttcaagggctca
gagcacagagagcaagctctaatgctccttcaagaccagccatttctcctcagtcatagc
cacagccccactctgtgccgggcagtgtgccagctcttggagaccttgctgcagcgaggg
gaggaggccaagcttccctccacactcacaggactctatgttggcctgctagaccgggca
gcccgggacagccctccaggggccctggtagggctggccaagttggcctgggagctgggc
cgcagacaccaaagtacccttcgggaggatcagttccccacagaacagataaggacctgg
gctgtgactaaaagccttgtgcaacctgtagtgcaacaggtcccaggggctgctgaggct
gagctggccttctccagcttcctcctgcagtgcttcctgggggccctatggctggctctg
agcagcgaaatcaaggacaaggagctgccgcagtttttagcactgaccccgaggaaaaag
aggccctatgacaactggatggaaggtgtgccacgctttctggctggactgattttccag
cctcgggcccgctgcttgggagcgctggttgggtctgcagcagctgcctcggcagacaag
aagcaaaaggtgctcaccagatacctgaagcgcctgcaacccagaacgctgcaggctggg
cggctgctggagctgctgcactgtgcccacgaggccagtgaggctgggatctggatgcac
gtggtgcgagagctgcctgcgtgcctctccttcctgggcacacggctcacgccacctgac
gcccatgtgctgggccaggccttgcaggcagctggccgagacttctccctggacctccgt
ggcacgggcatcgacccctctggcctggggaaccttgtgggactcagctgcgtcacccgt
ttcagggcggccttgagtgacaccgtggggctctgggagtccctgcagcagcgtggggag
acccagctactccaggcagcagaggacaagttcaccattgagccatttaaggccaagtcc
ctaaaggatgtggaagacctgggccaccttgtgcagacccagaggttaagaagttcctct
gaagacacagttcgtgagctccctgctgtccgagatctgaaaaagctggagtttgcgttg
ggccccacattgggcccccaagctttccccaaactagcaaagatccttccagccttttct
tctctccagcacttggacctggactctctgagcgacaacaagattggggacacgggtgtc
tcgcagctctcagccaccttccctcagctgaaggcactggagacgctcaacctgtcccag
aatagcattacggacacgggtgcctgcacccttgctgaggcccttcccttgctctctgca
tcccttctcagactcagcttatacaacaactgcatctgtgacatgggtgctgagagcctg
gcacgtgtgcttcctgagatggggtccctgcgggggatggacgtccagttcaacaagttc
acagctgtgggtgcccaacagctggctgctagcctgcggaagtgccctcgtgtggagacc
ctggcgatgtggacacccaccatcccgtttggtgtccaggaacacctacatcagctggac
tcccggatcagcctgcgatga
DBGET
integrated database retrieval system
