Cavia porcellus (domestic guinea pig): 100727054
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Entry
100727054 CDS
T07777
Symbol
Aaas
Name
(RefSeq) aladin
KO
K14320
aladin
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100727054 (Aaas)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoc03019
]
100727054 (Aaas)
Messenger RNA biogenesis [BR:
cpoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100727054 (Aaas)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_IFT140_1st
WD40_WDHD1_1st
WD40
ANAPC4_WD40
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_Prp19
KptA_kDCL
Motif
Other DBs
NCBI-GeneID:
100727054
NCBI-ProteinID:
XP_003476075
LinkDB
All DBs
Position
Unknown
AA seq
279 aa
AA seq
DB search
MCTLGLFPSPPPRGQVTLYEHNNELVTGSSYESPPPDFRGQWINLPVLHLAKDPLKTPGR
LDHGTRVAFIHHREQVWKRCINIWRDMGLFGVLNEIANSEEEVFEWVKTASRWALALCRW
ASSLHGSLFPHLSLRSEDLIAEFAQVTNWSSCCLRVFAWHPHANKFAVALLDDSIRVYNA
NSTIVPSLKHRLQRNVAALAWKPLSASVLAVACQSCILIWTLDPTSLSTRPSSGCAQVLS
HPGHTPVTSLAWAPSGGRLLSASPVDAAILLTWGIQTPP
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgtgcacgctaggattgttcccctcgccgcctcctaggggtcaagtcactctatatgag
cataataacgagctggtgacaggcagtagctatgagagcccgcctcccgacttccggggc
cagtggatcaatcttccagtactacacctggctaaggatcccctaaagacccctgggagg
ctggaccatggcacgagagttgcctttatccatcaccgggagcaagtgtggaagaggtgc
atcaatatttggcgtgatatgggcctttttggggtgctgaatgaaattgcaaactcagag
gaagaggtgtttgagtgggtaaagacagcatccagatgggccctggcactttgtcgatgg
gcctcctccctccatggatccctcttcccccacctgtctctccggagtgaagatctgatt
gctgaatttgctcaagtcacaaactggtccagctgctgcttgcgggtctttgcctggcac
cctcatgccaacaagtttgccgtggcactgctggatgactccatccgagtgtataatgcc
aacagcactatagtcccttctctgaagcaccggctacaacgaaatgtggcagctctggcc
tggaagcctcttagtgcctctgtcttggctgtggcctgccagagctgtattcttatctgg
accctggatcctacctccttgtctacccgaccctcttctggctgtgctcaagtgttgtct
caccctgggcacacacctgtcaccagcctagcctgggcccccagtggggggagattgctc
tcagcctcacctgtggatgctgctattctgcttacctggggcatccagactcctccttaa
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