Cavia porcellus (domestic guinea pig): 100727092
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Entry
100727092 CDS
T07777
Symbol
Npas1
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpoc03000
]
100727092 (Npas1)
Transcription factors [BR:
cpoc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
100727092 (Npas1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
HLH
PAS_4
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
100727092
NCBI-ProteinID:
XP_023418608
LinkDB
All DBs
Position
Unknown
AA seq
693 aa
AA seq
DB search
MREPARRGRAAGAGGRQAGARAGSALATSSPEPGVCRCPAMEGETEAQPVRLFTGLLGST
GASVSLKGLPGALSAAPTPPSSPSRASSIPPDPIPEMATPCPGSEVKCGVGRGASVPWDF
LPGLMVKAPPGPCLQAQRKEKSRNAARSRRGKENLEFFELSKLLPLPGAISSQLDKASIV
RLSVTYLRLRRFAALGAPPWGLRVLGAPAGLAPGRRGPAALVSEIFEQHLGGHILQSLDG
FVFALNQEGKFLYISETVSIYLGLSQVELTGSSVFDYIHPGDHSEVLEQLGLRAPTSGPP
TPPSVSSSSSSSSSLADTSEIDASPAEAPPFAQVQERSFFVRMKSTLTKRGLHVKASGYK
VGAWLLESSCQLCPILECNQGNQTGDFIGCCNLGNWGPHGRYDAQHCGARPCALKPIQAP
PLSPVTSRVSDHMDLGPSELVGRSCYQFVHGQDATRIRQSHLDLLDKGQVMTGYYRWLQR
TGGFVWLQSVATVAGSGKSPGEHHVLWVSHVLSHAEGSQTPLDTFQLPASTICEDVSSPG
SEPTDGGPPAEGKQAAPPDQDDDPQVRAKHIKVEPRSQEARGSKDSGDEEATEQPRAMRP
GFTSVIRGALRPWGPEPPRDPPLSLPPSLPPALLPAGFLPPVVRDLCAPGAIRYAPAELG
LVCPRLPSAFCPTLGLPCSGLGLAGPRAQQKGD
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgcgggaaccggcccggcgcgggcgtgcggcgggcgctggcggccggcaggcgggcgcg
agggcggggtcggcgctggccacgtcctcgccagagccaggagtgtgtcggtgcccagcc
atggaaggggaaactgaggcacaaccagtccggctcttcactggactcctgggctccaca
ggggcctcagtttccctaaaaggtcttcccggggcactaagcgccgccccgactcctccc
agcagcccgagtcgcgcgtcctcgatcccgcctgacccgattccggagatggcgaccccg
tgccccggtagcgaggtcaagtgtggggtgggccgcggcgccagcgtcccatgggacttt
ctgcccggcctgatggtcaaggccccgcctggaccctgcctgcaggcgcagcgcaaggaa
aagtctcgcaacgcggcgcgctcgcggcgcgggaaggaaaacctggagttcttcgagctg
tccaagctgctcccgctgccgggcgccatctccagccagctggataaggcgtccatcgtg
cgcctcagcgtcacctacctccgcctgcgccgcttcgccgcgctcggggcgccgccttgg
gggctgcgggtcctgggggccccggccgggctcgcccccggccgccggggccccgcagct
ctggtctccgagatcttcgagcagcacctgggaggacacatcctgcagtccctggacggc
ttcgtgttcgccttgaaccaggaaggaaaattcctgtacatctccgaaaccgtttctatc
tacctgggtctctcacaggtggagctgacaggcagcagcgtcttcgactacatccacccc
ggggaccactctgaggtgctggagcaactggggctgcgggccccgacctccggccctccc
accccgccttctgtctcctcttcttcctcctcttcttcctcgctggcggatacctctgag
attgatgccagccctgccgaggcgccccctttcgcccaggtccaggaacgctccttcttt
gtccgcatgaaatccaccctcaccaagagggggctacatgtcaaggcctcggggtacaag
gtgggtgcctggctgctagagagttcctgccaactctgtcctatcctggagtgtaaccaa
gggaaccagactggtgatttcattgggtgctgtaatttagggaactgggggccacacgga
cgctatgatgcccagcattgtggagcaaggccttgtgctctgaaaccaattcaggctcct
cccctctcgcccgtcacctccagagtcagtgaccacatggacctggggccctcagagctg
gtgggccgcagctgctatcagtttgtccatggacaggatgccaccaggatccgccaaagc
cacctggacctgctagacaaaggccaggtgatgactggttactaccgctggctgcagcgt
acgggcggcttcgtgtggctgcagtccgtggccactgtggctgggagcggaaagagccct
ggggagcaccacgtgctctgggtcagccacgtgctcagccatgctgaaggtagccagaca
cctctggacaccttccagcttccagccagcaccatctgtgaggacgtgtccagtcccggg
tcagagcccactgacgggggacctccggcagaagggaagcaggctgctcctccagaccag
gatgatgacccccaagtccgggctaagcacatcaaagtggagcctcgatcgcaggaagcc
aggggctcaaaggacagcggggatgaggaagccaccgagcagcctcgagcaatgcgaccc
gggttcacgtccgtcatccggggtgcactgcggccatggggccctgaacctcctcgagac
ccaccgctgtccctgccaccgtcactgccacccgctctgctgcctgcgggcttcctgccg
ccggtggtacgcgacctctgcgcacctggtgccatccgctacgcgcccgctgagctgggc
cttgtgtgcccacgcctgcccagcgccttctgccccacactgggcctgccctgttctggg
ctcgggcttgcaggccccagagcacagcagaagggggactga
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