Cavia porcellus (domestic guinea pig): 100727200
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Entry
100727200 CDS
T07777
Symbol
Rai1
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpoc03000
]
100727200 (Rai1)
Transcription factors [BR:
cpoc03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
100727200 (Rai1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
100727200
NCBI-ProteinID:
XP_013003737
LinkDB
All DBs
Position
Unknown
AA seq
1543 aa
AA seq
DB search
MQSFRERCGFHGKQQNYPQTSQETSRLENYRQPSQAGLSCDRQRLLAKDYYNPQPYPGYE
GGTSTPSGTGAAVATEKYHRGGKALPSQQALQGRPAFPGYGGVQDSSPYPGRYSGEEGLQ
AWGAPQPPPPQPQPLPGGVGKYDENLMKKTAVPPGRQYPEQGTQLPFRTHSLHVQQPPPP
PPQQLPQPQQPLAYPKLQRQKLQNDIASPLPFPQGGHFPQHSQSFPASSTYSSSVQGGTQ
GAHSYKSCTAPSTQPHDRPLTANTSLAPGQRVPNLHAYQSGRLSYDQQQQQQQQQQQQTL
QSRHHAQETLHYQNLAKYQHYGQQGQGYCQPDAAVRTPEQYYQTFSPSSSHSPARSVGRS
PSYSSTPSPLMPNLESFPYSQQPLSAGAFPTGVTDHSHFMPLLNPSPTDAASSVDPQASN
CKPIQKEKIPENLLSDLSLQSLTALTSQVENISNTVQQLLLSKAAVPQKKGVKNLVSRTP
EQHKSQHCSPEGSGYSAEPSGTPLSEPLSNTPQSTHAEPQEADYLSGSEDPLERSFLYCS
QPRGSPARVNSNSKAKPESVSTCSVTSPDDMSTKSDDSFQSLHSTLPLDSFSKFVASERD
CPRLLLSALAQEDLASEILGLQEAIGEKTDKAWVEAPSLAKDAGKPPFSLENHSACLDSV
AKSVWPRPGEPETLPDSLQLDKGSGSKEFSPGLFEDPSVAFASPDPKKTTGSLSFGTKPT
LGAATPDPTTTAFDCFPDTTTASSADSANPFAWPEENLGDACPRWGLHPGELAKGLEQGG
KTSDGVGKGDSHEASGCLGFQEEEPPGEKAVALPRDFKQEAAGGVKEEVGGILQCPDDVG
KADRWLEDSRHCCAAADFGDLPLLPPPGRKEDLEAEEHHHHTNTGSGADGKEERAEDSPA
LFRRVSSPKKPKLKGNSEPTMKSSPPESPETCIKLASRAAFPGAMKTKVLPPRKGRGLKL
EAIVQKITSPGLKKFTCRVPGAPPGTPLSPALPEKERGGMKSAGGSPARAEEGLVSVGTG
QKLPAAVGMDPLCRNAASRSLKGKLVSSKKLSSVNCFKTEAFTSPEALQPGATALAPKKR
SRKGRAGGLGLPKGPLEKRPYLGPALLLSPRDRASSTQGGGEDNSSGGKKPKTEELGMAS
QPSEGRSCQPQTRAQKQPGHANYSSYSKRKRLTRGRAKNTNTSPCKGRAKRRRQQQVLPL
DPAEPEIRLKYISSCKRLRADSRTPAFSPFVRVEKRDAFTTVCTVVNSPGDEPKPHRKPS
SFSSSSSSSSSLDVAGAYLTTLPGGSVLQSRPSLPLSSMMHLGPVVSKALSTSCLVCCLC
QNPANFKDLGDLCGPYYPEHCLPKKKPKLKEKVRPEGTCEEALLPLERTLKGLECVAAAA
ATAATAAGKPPRLDGPADPAKQGSLRTSARGLSRRLQSCYCCDGRGDGGEEMAPVDKSRK
HECVKEAPAEPVGDTQEHWVHEACAVWTGGVYLVAGKLFGLQEAMKVAVDMTCSSCQEAG
ATIGCSYKGCIHTYHYPCASDAGCVFIEENFSLKCPKHKRLPL
NT seq
4632 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcttttagagaaaggtgtggtttccatggcaaacaacagaactacccacagacc
tcacaggaaacatcgcgtctggagaattatagacagccgagtcaggctgggctgagctgt
gaccggcagcggctgctcgcaaaggactattataatccgcagccttacccgggctatgag
ggtggcactagcaccccctctggtacgggggctgcagtggccactgagaagtaccaccga
ggcggcaaggccctgccctcacagcaggccctgcaggggaggccagctttccctggctat
ggcggtgttcaggacagcagcccttacccgggacgctactctggcgaggagggcctgcag
gcctggggtgccccacagccaccacctcctcagccacagcccctgccagggggtgtgggc
aaatacgatgagaacttgatgaaaaagacagcagtaccccctggcaggcagtacccagag
caaggtacccagcttcccttccggactcactccctgcacgtccagcagccgccgccaccg
ccaccccagcagctgccacagccccagcagcctctggcgtatcccaaacttcaaaggcag
aaactgcagaatgacattgcctcacctttgccttttccccagggtggccacttcccccag
cactcccagtccttccctgcctcttctacttactcttcctctgtccagggtggcacacag
ggagcccactcttacaagagttgcacagcaccgtccacccagccccatgacaggccactc
accgccaataccagcctggccccagggcagcgggtcccaaaccttcacgcctatcagtca
ggccgcctcagctacgaccagcaacagcagcagcagcagcagcagcaacagcaaactctt
cagagccggcaccatgcccaggaaaccctccattaccaaaacctcgccaaataccaacac
tatggacagcaaggccagggctactgccagccagatgcggctgtacggacgccggagcag
tactaccagactttcagtcccagctccagccactcccctgcacgctctgtgggacgctca
ccatcatatagctccactccatcgcccttgatgcccaaccttgagagcttcccatacagc
cagcagccactcagtgctggagccttccccacgggagtcaccgaccacagtcacttcatg
cccctgctcaacccctccccaacggatgctgccagctctgtggacccccaggccagcaac
tgtaagcccattcagaaggaaaagatccccgaaaacctgctctcagatctcagcctgcag
agcctcacagcactgacctcacaggtagagaacatctccaacacagtacagcagcttctg
ctgtccaaggctgctgtaccacagaagaaaggggtcaagaaccttgtgtccaggactcca
gagcagcacaagagccagcactgcagccctgaaggtagtggctactcggctgagccgtca
ggcacaccactgtctgagccactgagcaacaccccacagtccacccatgccgagccacag
gaggctgactacctgagcggctctgaggacccactggagagaagcttcctctactgcagc
cagccccggggcagccctgccagagtcaatagtaattcaaaggccaagcctgagtctgtg
tccacctgttctgtgacctcacccgatgacatgtctaccaaatcagatgactccttccag
agcttgcacagcactctgccactggacagcttctccaagtttgtggccagtgagcgggac
tgtcctcggctgctcctcagtgccctggcacaggaggacctggcctctgagatcttgggg
ctgcaagaagccatcggtgagaagactgacaaggcttgggttgaggctcccagcttggcc
aaggacgctggcaagcctcccttctccctggagaaccacagcgcctgcctggactcagta
gccaagagtgtatggccacggcccggggagccagagaccctgcctgattctttgcagctg
gacaagggtagtggctccaaggaattcagcccaggactctttgaagacccatctgtggcc
tttgccagtcctgatcccaagaagacaactggttccctctcctttggcaccaagcccacc
ctcggggctgccactccagaccccaccacaacagcttttgactgctttccagacacaact
actgccagctcagcagacagtgccaacccctttgcgtggccagaggagaacctgggtgat
gcttgtccccggtggggactgcaccctggtgagcttgccaaaggcctggagcagggtgga
aagacctcagatggtgtgggcaaaggggacagccacgaggcttcaggctgcctgggcttc
caggaggaggagccccctggggagaaggcagttgcactgcccagggacttcaagcaggag
gcggcgggtggggtgaaggaggaggtgggagggatattgcagtgccccgatgatgtgggt
aaggccgaccggtggctggaggatagccgccactgctgcgctgctgcagattttggggac
ctgccgctgttgccgcccccagggaggaaggaggacctggaggctgaggagcaccatcac
cacactaacactggcagtggggcagatgggaaggaggagagggccgaggactcccccgcc
ctcttcaggagggtgtcgtcccccaaaaagcccaagctcaagggcaacagcgagcccacc
atgaagtcctcacctccggagagccccgaaacctgcatcaagctcgcttctcgggcggcc
ttcccgggggccatgaagaccaaggtgctgccgccccggaagggccgaggcctgaagctg
gaggccatcgtgcagaagatcacttccccgggtctcaagaagttcacatgcagagtgcca
ggggcccctccagggacgcctctgagcccagccctccccgagaaggaacggggtggcatg
aagagtgccggaggcagcccggcaagggcagaggaaggtctggtgagcgtgggcactggg
cagaagcttccggcagctgtgggaatggacccactatgcagaaatgcagccagcaggtct
ttgaaaggcaaacttgtgagcagtaagaaactgtcctctgtcaactgtttcaaaactgag
gccttcacctccccagaggccctgcagccaggggcaactgccctggcacctaagaagagg
agccggaaaggcagagctggaggtctcggactccccaaaggcccactggagaagcggccc
taccttggtccagctctgctcctcagtccccgagacagggccagcagcacacaggggggt
ggcgaggacaattctagtggaggcaagaagccaaagacagaggagctgggcatggcctcc
cagccctctgagggccggtcctgccagccccagacaagggcacagaagcagccaggccat
gccaactacagcagctattccaagcggaagcgcctcacccggggccgggccaaaaacacc
aacacttcaccctgtaaggggcgtgccaagcggaggcggcagcagcaggtgctccccctg
gatcctgcagagcctgaaatccgcctcaagtacatttcctcttgcaagcgactgagggca
gacagccggacccctgccttctcgccctttgtgcgggtggagaagcgagatgcatttacc
actgtatgcactgttgtcaactccccaggggatgagcccaaaccccacaggaagccttca
tccttcagctcctcttcctcatcatcatcctccttggatgtagcgggggcttacctgacc
acactccctggaggctccgtcctgcagtcacggccctccctgcctctctcctctatgatg
cacctggggcctgtggtttccaaggccctgagtacctcttgccttgtttgctgcctctgc
caaaacccggccaacttcaaggacctcggagacctctgtggaccctactaccctgaacac
tgcctccccaaaaagaagccaaaactcaaggagaaggtgcgtccagaaggcacctgtgag
gaggccctgttgcctctcgagagaacactcaagggccttgagtgtgtggctgccgctgct
gccactgctgccactgctgccgggaagccccccaggcttgatggcccagccgacccggcc
aagcagggctcactgcgcaccagtgcccgtggcctgtcccggcgcctacagagttgctac
tgttgtgatggccggggtgacgggggtgaggagatggccccagtcgacaagagccgcaag
catgagtgcgtcaaggaggcccccgcagagcctgtgggggacacccaggagcactgggtg
cacgaggcctgcgctgtgtggaccggcggggtctacctggtggccgggaagctctttggg
ctacaggaggccatgaaagtggccgtggacatgacgtgttccagctgccaggaagccggg
gccaccattgggtgctcctacaaaggatgcatccatacctaccactacccatgtgccagt
gatgcaggttgcgtattcatcgaagagaacttttctttgaaatgtcccaaacataagagg
ctgccgttgtaa
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