KEGG   Cavia porcellus (domestic guinea pig): 100727342
Entry
100727342         CDS       T07777                                 
Symbol
Ssu72
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase SSU72
  KO
K15544  RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
Organism
cpoc  Cavia porcellus (domestic guinea pig)
Pathway
cpoc03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cpoc00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100727342 (Ssu72)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cpoc03021]
    100727342 (Ssu72)
   03019 Messenger RNA biogenesis [BR:cpoc03019]
    100727342 (Ssu72)
Enzymes [BR:cpoc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     100727342 (Ssu72)
Transcription machinery [BR:cpoc03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     100727342 (Ssu72)
Messenger RNA biogenesis [BR:cpoc03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     100727342 (Ssu72)
SSDB
Motif
Pfam: Ssu72
Other DBs
NCBI-GeneID: 100727342
NCBI-ProteinID: XP_003461558
Ensembl: ENSCPOG00000002238
UniProt: H0UY31
LinkDB
Position
Unknown
AA seq 194 aa
MPSSPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTT
YDQMYNDLLRKDKELYTQNGILHMLDRNKRIKPRPERFQNCKDLFDLILTCEERVYDQVV
EDLNSREQETCQPVHVVNVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFE
EKSGRAFLHTVCFY
NT seq 585 nt   +upstreamnt  +downstreamnt
atgccgtcgtcgcctctacgtgtggcggtggtgtgctcgagtaaccagaaccgaagcatg
gaggcgcacaatatcctcagcaagcgaggattcagcgtccgatcctttggaacaggaact
cacgtgaaactcccaggaccagcaccagacaagcccaatgtttatgatttcaaaaccaca
tatgaccagatgtacaatgacctgctcaggaaagacaaagaactctacacccagaatgga
attttgcatatgctggacagaaataagagaatcaagcctcggccagaaaggttccagaac
tgcaaggacttgtttgacctgatcctgacctgtgaagagagggtttatgatcaggtggtg
gaagatctgaattccagagaacaggagacctgccagccagtgcacgtggtcaatgtggac
atccaggacaaccatgaggaggccacactaggagccttcctcatctgcgagctctgtcag
tgtatccagcacacggaggacatggagaatgagatcgatgagctgctgcaggagttcgag
gagaagagcggccgcgcattcctgcacaccgtgtgcttctactga

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