Cavia porcellus (domestic guinea pig): 100727489
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Entry
100727489 CDS
T07777
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM38 isoform X3
KO
K12014
tripartite motif-containing protein 38 [EC:
2.3.2.27
]
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpoc04121
]
100727489
Enzymes [BR:
cpoc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100727489
Ubiquitin system [BR:
cpoc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100727489
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_2
RING_XB3-XBAT31
zf-RING_5
U-box
zf-RING_6
Trm112p
zf-RING_10
Prefoldin_2
UvrD-helicase
CC_BshC
zf-RING_4
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
100727489
NCBI-ProteinID:
XP_003468829
Ensembl:
ENSCPOG00000012608
ENSCPOG00000037924
LinkDB
All DBs
Position
Unknown
AA seq
463 aa
AA seq
DB search
MASTIITKKIKEIATCSICQNLMMNPVSITCGHSFCQMCLEQHLYKVQLSQGKNIFCPLC
HSPFNKDSFRANRHLESIIEVFEEMDHELQCEAHGEQLQLFCEDDGQLICWRCERAPQHQ
GHTTVLVEDVCQGYKEKLQKAITKLNELHTECMNQKAFVATQITEWQDTVETHRQKIKSD
FKNLHSFLHEEEKSFLWKLEKEEEQILTKLRESEAKLERKSDELEEHKVELEAKCQGSDQ
NLLQDVKSTLSRTCAVKLETPEAFTLVIQTVCGVAEHYLDVKKILRRHQVSVTLDPSTAH
PALTLSEDRRQVSRGCSQQNAEVSSRRFTAFPCVLGCEGFSSGRHFFEVDVGEGTAWDVG
VCMENVERGLNMKQVPELGFWTIRRCPENGYVALTFPLTALKLRERPLVVGVALDYEAGA
VSFYNMTSGSHIFTFPKASFSGTLRPYFQVYQHSPLFLPPCGE
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaacgatcatcaccaagaagattaaagagattgccacctgctccatctgccag
aacctgatgatgaacccagttagcatcacctgcggacacagcttctgccagatgtgcttg
gagcagcacctttacaaggtgcagctcagtcaggggaagaatatattctgtcctctgtgt
cattccccattcaataaagacagcttccgggccaacaggcatctggaaagcatcattgaa
gtctttgaggagatggaccatgagttgcagtgtgaggcccacggagagcagctccagctc
ttctgcgaagatgatggccagctcatctgctggcgctgtgagcgggcaccacagcaccaa
gggcacaccacggtgctggtggaggacgtgtgccagggctacaaggaaaagctccagaaa
gctataacaaaattgaatgaactccatacagaatgtatgaaccagaaagcatttgtggca
acacagataactgagtggcaggatacagtagagactcacagacaaaaaatcaagtctgac
tttaagaatctccatagttttctgcatgaggaggagaagtcttttctttggaagctggag
aaagaagaagagcagatacttacaaaactaagggagagtgaggcaaaactggagcggaag
agtgatgaacttgaggaacataaggttgagctggaggcaaaatgtcagggctcagaccag
aacctgttgcaggatgtgaaaagcaccttgagcaggacttgtgctgtgaagctggaaaca
cccgaggcctttaccttggtgattcagactgtgtgtggtgttgcagagcattatttggat
gtgaagaaaatattaagacgtcatcaagttagcgtgactctggacccaagtacagctcat
cctgccctgactctgtctgaggatcggagacaagtgtctcggggatgcagccagcagaat
gctgaagtctcttccaggagatttacagccttcccctgtgtgctgggctgtgagggcttt
agctcaggaagacacttcttcgaagtggatgttggagaaggaacagcttgggatgtggga
gtctgtatggaaaatgtggagcggggcctcaacatgaagcaggtacctgagcttggattc
tggaccatccgacggtgcccagagaatggctatgtagcactgacctttcccctcactgcc
cttaagctgcgtgagcgccccctggtggtgggagttgctctggactatgaggctggagct
gtgtccttctacaacatgacctctggctcccacatcttcaccttccccaaggcttccttc
tctggtactctgcggccctatttccaggtttatcagcattcacctttgttcctgcctcca
tgtggtgagtag
DBGET
integrated database retrieval system
