Cavia porcellus (domestic guinea pig): 100727693
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Entry
100727693 CDS
T07777
Symbol
Trim54
Name
(RefSeq) tripartite motif-containing protein 54 isoform X1
KO
K10653
tripartite motif-containing protein 54
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100727693 (Trim54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpoc04121
]
100727693 (Trim54)
Ubiquitin system [BR:
cpoc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100727693 (Trim54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
PHP
Sina_RING
UvrD_C
DUF349
COG2_C
FlgN
DUF5799
DUF1421
Zn_ribbon_FGT1_2
FUSC
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
100727693
NCBI-ProteinID:
XP_013011154
Ensembl:
ENSCPOG00000003839
UniProt:
H0V1T5
LinkDB
All DBs
Position
Unknown
AA seq
364 aa
AA seq
DB search
MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSTAVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM
LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFETLCAVLEERKGELLQALAREQE
EKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVELAG
RPEPGYESMEQFSVSVEHVADMLRTIDFQPGASGEEEEDEVALDGDESGAGPEEERPDAP
EGQH
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcacggtgggtttcaagccgctgctaggggatgcgcacagcatggacaacctg
gagaagcagctcatctgccccatctgcttggagatgttctccaagcccgtggtgatcctg
ccctgccagcataacctgtgccgcaagtgtgccaacgatgtcttccaggcctcgaaccct
ctgtggcaatcccggggctccaccgctgtgtcttcaggaggccgtttccgctgcccatcg
tgcaggcatgaggttgtcctggaccggcatggcgtctatggtctgcagagaaacctgcta
gtggagaacattatcgacatttacaagcaggagtcctcgaggccgctgcactccaaggct
gagcagcacctcatgtgcgaggagcacgaggaggagaagatcaacatctactgtctgagc
tgcgaggtgcccacctgctccctctgcaaggtctttggggcccacaaggactgtgaggtg
gccccgctgcccaccatttacaaacgccagaagagtgagctcagcgacggcatcgccatg
ctggtggccggcaatgaccgagtgcaagcagtgatcacgcagatggaggaggtgtgccag
accatcgaggacaacagccgcaggcagaagcagctgttaaaccagaggtttgagacgctg
tgcgcggtgctggaggagcgcaagggcgagctgctgcaggcgctggctcgggagcaggag
gagaagctgcagcgcgtccgcggcctcatccgccagtacggagaccacctggaggcctct
tccaagctggtggagtcggccatccagtccatggaagagccgcagatggcgctttacctc
cagcaggccaaggagctgatcaataaggtcggggccatgtccaaggtggagctcgccggc
cggccggagccgggctacgagagcatggagcagttctccgtgagcgtggagcacgtggcg
gacatgctgaggaccatcgacttccagcccggcgcctccggggaggaagaggaggacgag
gtggcgctggacggggacgagagcggcgcaggccccgaggaggagcggcccgacgccccc
gagggccagcactga
DBGET
integrated database retrieval system
