Cavia porcellus (domestic guinea pig): 100727721
Help
Entry
100727721 CDS
T07777
Symbol
Ttc28
Name
(RefSeq) tetratricopeptide repeat protein 28
KO
K24936
tetratricopeptide repeat protein 28
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cpoc03037
]
100727721 (Ttc28)
Cilium and associated proteins [BR:
cpoc03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
100727721 (Ttc28)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_2
TPR_8
TTC28_C
TPR_10
TPR_MalT
TPR_14
Rapsyn_N
TPR_19
TPR_NPHP3
TPR_17
TPR_BSK1_C
RPN7
TPR_16
TPR_11
TPR_9
TPR_6
ANAPC5
Nup188_N-subdom_III
Motif
Other DBs
NCBI-GeneID:
100727721
NCBI-ProteinID:
XP_003478076
LinkDB
All DBs
Position
Unknown
AA seq
2610 aa
AA seq
DB search
MKRLQHEIAPSQWRPPSALLGLTPGPGSALRAKKMGSCAWSPGAGPGWSAVRLAVAQSKE
LRAFQDGPDRRGGGKHDAGNSDPPQRAPGWLYIGSLGDSVGVAGEAQVLTSRVGLVGSQL
TVPGGSKAVVGSPQSDTGKLSVHLSYVECLISLFGAKTIGRRSPDEPVLSKAEFVEKVRQ
SNQACHDGDFHTAIVLYNEALAVDPQNCILYSNRSAAYMKIQQYEKALDDAIKARLLNPK
WPKAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPMRDSLEPTYQ
QLQKMKLDKSPFVVVSVVGQELLTAGHHGASVVVLEAALKIGTCSLKLRGSVFSALSSAY
WSLGNTEKSTGYMQQDLDVAKTLGDQTGECRAHGNLGSAFFSKGNYREALTNHRHQLVLA
MKLKDREAASSALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDELSEARELGNMGAVY
IAMGDFENAVQCHEQHLKIAKDLGNKREEARAYSNLGSAYHYRRNFDKAMSYHNYVLELA
QELMEKAIEMRAYAGLGHAARCMQDLERAKQYHEQQLGIAEALKDRAAEGRASSNLGIIH
QMKGDYDTALKLHKTHLCIAQELSDYAAQGRAYGNMGNAYNALGMYDQAVKYHRQELQIS
MEVNDRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDIQSEARALSNLGNFH
CSRGEYDQAAPYYEQYLQLAPDLQDMEGEGKVCHNLGYAHYCLGNYQEAVKYYEQDLALA
KDLHDKLSQAKAYCNLGLAFKALLNFSKAEECQKYLLSLAQSLNNSQAKFRALGNLGDIF
ICKKDINGAIKFYEQQLSLAHHVKDRRLEASAYAALGTAYRMIQKYDKALGYHTQELEVY
QELSDLPGECRAHGHLAAVYMALGKYTMAFKCYEEQLDLGQKLKDPSLEAQVYGNMGITK
MNMNVMEEAIGYFEQQLAMLQQLSGNESVLDRGRAYGNLGDCYEALGDYEEAIKYYEQYL
SVAQSLNRMQDQAKAYRGLGNGHRAMGSLQQALVCFEKRLVVTHELGEAFNKAQAYGELG
SLHSQLGNYEQAISCLERQLNIAREMKDRALESDAACGLGGVYQQMGEYDTALQYHQLDL
QIAEETNNPTCQGRAYGNLGLTYESLGTFERAVVYQEQHLSIAAQMNDLVAKTVSYSSLG
RTHHALQNYSQAVMYLQEDNCIVGPWVLPFSQSRNVTEVCLPSTSLNKSWPLARGNPPQA
HWIPPDEGLYRASALFETIRHEAQLSTDYKLSLFDLQTSSYQALQRVLVSLGHLDEALAV
AERGRTRAFADLLVERQTGQQDSDPYSPVTIDQILEMVNGQRGLVLYYSLAAGYLYSWLL
APGAGILKFHEYYLGDNAVESSSDFQAGSSATLPTATSSVLEQHITSVREALGVESYYSR
ACASSETESEAGDIMDQQFEEMNNKLNSVTDPTGFLRMVRRNNLLNRSCQSMTSLFSNTM
SPIKDGTSSLPRRQSSFAKPPLRALYDLLIAPMEGGLMHSSGPVGRHRQLVLVLEGELYL
IPFALLKGSSSNEYLYERFTLIAVPAIRSLGPYSKGHLRKSPPSYSSSTSMAAVIGNPKL
PSAVMDRWLWGPMPSAEEEAYMVSELLGCQPLVGSVATKERVMSALTQAECVHFATHISW
KLSALVLTPSVDGNPASSKSSFGHPYTIPESLRVQDDASDGESISDCPPLRELLLTAADL
LDLRLPVKLVVLGSSQEANSRVTADGVVALTRAFLAAGAQCVLVSLWPVPVAASKMFIHA
FYSSLLNGLKASAALGEAMKVVQSSKAFSHPSNWAGFLLIGSDVKLNSPSSLIGQALTEI
LQHPEHARDALRVLLHLVEKSLQRIQNGQRNAMYTSQQSVENKVGGIPGWQALLTAVGFR
LDPPASGLPAAVFFPTSDPGDRLQQCSSTLQSLLGLPNPALQALCKLITASETGEQLISR
AVKNMVGMLHQVLVQLQAGEKEQDFTSAPIQVSISVQLWRLPGCHEFLAALGFDLCEVGQ
EEVILKTGKQASRRTMHFALQSLLSLFDSTELPKRLSLDSSSSLESLASAQSVSNALPLG
YQHPPFSPTGAESIASDAISVYSLSSIASSMSFVSKPEMGSEAGGPRGRQDYDRPKNTFP
QQSTLPRTQLSPQTRPADSKEEEEYEGFSIISTEPLAAYQESKKTRFSPDHRQPHAGAAA
GVKVSVSSKGSVSTPNSPVKMTLIPSPNSPFQKVGKLASSDTGESDQSSTETDSTVKSQE
ESNPKLDPQELAQKILEETQSHLIAVERLQRSGSQVGKSHNREDGVSVPNSSATVFRASE
TSAFSRPVLSHQKSQPSPVTVKPKPPARSSSLPKVSSGYSSPTTSEASLKDSPNQHSGRP
SPSCDSQASLSDQPLFKLKYPSSPYSAHISKSPRNMSPSSGHQSPAGSAPSPALSYSSAG
SARSSPADAPDLDKLKLAAIDEKVQAVHNLKMFWQNTAPHATGPVKPARAPPGTMTSKRD
VLSLLNLSPRHNKKEEEADKLELQELSVQRRDEGPPRAPPNGHWRTETTALGPLLPTSPL
ALAPERPLRLPSANGYKFLSPGRFFPSSKC
NT seq
7833 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgactccagcatgagatcgcaccgagtcagtggcgtcctccctctgcacttctt
ggactgactcccggcccgggctcagcgttgagagcgaagaagatgggctcctgcgcgtgg
agcccaggggctgggccggggtggtctgcagtgcggctggcggtggcgcagagcaaggaa
ctgcgcgctttccaggacgggccggacaggcgcggcgggggtaaacacgacgccgggaac
agcgacccgccgcaaagggctccaggctggctgtacatagggtcgctgggagacagtgtc
ggcgtagctggggaggctcaggtgctgacatcccgagtagggttggtagggagccagctc
accgtccccggaggcagcaaggctgttgttggctctccacagagcgatactggaaagctt
tccgtccacttgagctatgtagagtgtttgatctctctctttggtgccaagactattggc
cggagaagtcctgatgaaccagtactgagcaaagctgaatttgttgagaaagttcgtcag
agtaaccaggcctgtcatgatggagatttccacacagctattgttctgtataatgaagcc
ctggctgttgaccctcagaactgcatcttatacagcaatagatctgcagcctacatgaaa
atccagcagtatgagaaggcactggatgatgcaatcaaagcccgacttctcaatcccaaa
tggccaaaggcatacttccgacagggtgttgccctccagtaccttggacgtcatgccgat
gccctggcagcctttgcatctggactggctcaagaccccaagagtctccaacttctggtg
gggatggtagaggctgccatgaaatctcccatgagagattccctcgagcccacttatcag
caacttcagaaaatgaaactggacaagagtccctttgtggtcgtgtctgtggttgggcag
gaactcctgacagctggccaccatggggcatctgtggttgtcttggaagctgctctgaag
attggcacctgcagcctcaaactgagaggttctgtgttctctgccctgagcagtgcttat
tggtctctcggaaacacagagaagagcactggatatatgcagcaggacttggatgtagcc
aagaccttaggtgaccagacaggagaatgccgagctcatgggaatctgggttctgcattc
ttctccaaaggaaattaccgggaggctctcaccaaccacaggcatcagctggtgctcgcc
atgaaactcaaggatcgggaggcagcttcgtcagccctgagcagtctaggccacgtgtac
acagcaattggagactatcccaatgcactggccagtcataaacagtgtgttcttcttgcc
aagcaatccaaagacgaactttctgaagcccgagaacttggcaacatgggtgcagtgtac
attgccatgggtgactttgagaatgctgtgcagtgccatgagcagcatctgaagatagcc
aaggacctgggaaataagcgagaagaggcccgggcctacagcaaccttggcagtgcctat
cactaccggaggaattttgacaaggctatgtcttaccacaactacgtgctggagctggca
caggagctgatggagaaggccattgagatgcgggcctatgctgggctaggccatgctgcc
aggtgcatgcaggatttggagagggcaaaacagtatcatgaacagcagctgggcattgct
gaggccctcaaggaccgagctgcagaggggcgtgcttcctccaatctaggaatcatacac
cagatgaaaggtgattatgatacagcactgaaactccacaagactcacctgtgcattgcc
caggaactcagcgactatgctgcccagggtcgagcctatgggaacatgggaaatgcctac
aacgcactgggcatgtatgaccaggcggtcaagtaccaccgacaggagttgcagatctcc
atggaggttaatgaccgtgcctcacaagcatctacacatgggaatcttgcagtggcgtac
caggccctgggtgcccatgaccgggccctgcagcactatcagaaccacttgaacattgcc
cgggagcttcgagacatccaaagcgaggcccgggccctcagcaacctgggaaacttccac
tgctctaggggagagtatgaccaggctgctccctattatgaacagtatctccagctggct
cctgaccttcaagacatggaaggagaggggaaggtctgccacaatcttggctatgcccat
tattgccttggaaattatcaggaggcagtaaagtactatgagcaggatctggccctggcc
aaagaccttcatgataaattgagccaagcaaaagcctactgcaacttaggcctagcattc
aaggctctgctgaatttcagcaaagctgaagagtgtcagaagtacctgttatccctagct
cagtccctgaataattcccaggctaaatttcgagccctagggaacttaggtgatatattc
atttgtaaaaaagatataaatggtgcaataaaattctatgagcagcagctgagcttagct
caccacgtaaaggacagaagactggaggccagtgcatatgcagcactgggcacggcatac
cgaatgatccagaagtatgacaaggccttaggttatcacacacaggaactagaggtatat
caggagctgagtgacttgccaggtgaatgcagagctcatgggcacctggctgctgtctac
atggccctgggaaaatacacaatggcattcaagtgctacgaagagcagctagacctgggg
cagaagctgaaggatccaagtctagaagcacaggtctatggcaacatgggtatcacaaag
atgaatatgaacgtgatggaagaagccattggctattttgagcagcagttggccatgcta
cagcagctcagtgggaatgagtcagtgctcgacagaggccgggcctatggcaaccttggg
gattgctatgaggccctgggtgactatgaggaagccatcaaatactatgagcagtattta
tctgttgcccagagtctgaatcgtatgcaagaccaagccaaggcttaccggggtctagga
aatggacacagggcaatggggagcttgcagcaagcccttgtgtgctttgaaaagaggctt
gtggtcacccatgaacttggggaggccttcaataaagcccaggcctatggagagctggga
agtctgcacagccaattagggaattatgaacaagccatttcctgccttgaacgccagctg
aacattgctagagagatgaaagaccgagccttggagagtgatgcagcctgtggcttgggg
ggcgtctaccagcagatgggggagtatgatacagccctgcagtaccaccagcttgatctg
cagatagccgaggaaactaataaccctacgtgccaggggcgagcctatgggaacctgggc
ctgacatatgagtccctgggcacctttgaaagggctgtggtctaccaagaacagcacttg
agcatcgctgcacagatgaacgacttagtggccaagacagtgtcctatagtagccttgga
aggacccatcatgccttgcagaactattcccaggcggtcatgtacttacaggaagataat
tgtatagttggtccttgggtgcttcccttctcccaaagcagaaatgtcacagaagtttgc
ctgccttccacctctttaaacaagtcttggcccctggctcgagggaaccctccgcaggca
cactggatacccccagatgaggggctctacagggcatcagccttgtttgaaacaatccgg
cacgaggcacagctgagcacagactacaagctctccctctttgacctgcagacttcatcc
taccaggccttgcagcgggtgctggtcagcctgggccaccttgatgaagccctagctgtg
gcagaaagaggtcggacaagggcatttgctgacctgctggtggaacgacaaacaggacaa
caggactcggacccctactccccagttaccatcgatcagatcttagagatggttaatggc
cagcgaggacttgtgctttactactctttggctgcagggtacctgtatagttggctgctt
gctcctggcgcaggcatcctgaagtttcacgagtactacctgggtgacaacgcggtggag
agctccagtgacttccaggctgggagcagtgccacgctgccaacagcaaccagttcggtt
ctggagcagcacattaccagtgtgcgtgaggccctgggtgtggagtcttactactccagg
gcctgtgccagcagtgaaacagagagtgaagccggagacatcatggaccagcagtttgaa
gagatgaacaacaaacttaactccgttaccgaccccactggctttctgcgaatggtccgc
cgcaataacctccttaacaggagctgccagagcatgacgagcttgttcagtaacaccatg
tcacccatcaaggacggcacttcatctctgccccggaggcagagctcctttgccaagccc
ccactccgtgctctgtatgacctgctcattgcacccatggaagggggcctgatgcactcc
agtggccctgtgggccgacaccggcaactggtactggttctggagggggaactctacctc
atcccctttgccctcctgaagggcagctcctccaacgagtacctgtatgaacgcttcacc
ctcatcgccgtgcctgccatccgctcacttggcccatactcaaagggtcacctgaggaag
agcccaccctcatactccagctctacatccatggcagctgtcatcggcaatcccaagctc
ccatcagcagtgatggacagatggctgtgggggcccatgccatccgctgaggaggaagcc
tatatggtgtctgagctactgggctgccagccattggtgggcagtgtggccaccaaggag
agggtcatgagtgctctgacccaggctgagtgtgtccacttcgccacccatatctcctgg
aaattgtcagccttggtcctcacacccagtgtggatggcaaccctgccagcagcaagagc
tccttcggccacccttacacaatacctgagtccctgcgcgtacaggacgatgccagtgat
ggcgagagtatctcagactgcccgcctctgcgggagctgctgctcacagccgctgacctc
ctggacctgcggctgcccgtgaagctcgtggtacttggctcctcccaggaggccaacagc
agggtcaccgcagatggggtggtggcactgacacgagccttcctggctgctggcgcacag
tgtgtccttgtgtctctgtggccagtgccagtggcggcttccaagatgttcatccacgcc
ttctactcatctctgctgaatggcctgaaggccagtgctgctctgggagaggccatgaag
gtagtgcagagcagcaaggccttctcacacccctccaactgggcagggttccttctcatt
ggaagtgatgtgaagctgaacagtccctcctcactcattggccaggccctcacggagatc
ctacagcatccagagcatgcacgggatgccctgcgagtactgctgcacctggtggagaaa
tccctacagcgtatccagaatgggcagcgcaatgccatgtacacctcccagcagagtgtg
gagaacaaagtgggcggcatccctggctggcaggccctcctcactgctgtgggcttccgg
ctggaccccccagccagcggcctgccggcagctgtcttcttcccgacttccgacccaggc
gaccggctccagcagtgcagcagcacgctccagtccctgctgggtctgcccaatcctgcc
cttcaggccctgtgcaaactcatcactgcttctgagacaggcgagcagctcatcagccgg
gctgttaaaaatatggtgggaatgctccaccaggtgctggtccagctgcaggctggtgag
aaggagcaagacttcacttcggctcccattcaggtctccatcagcgtccagttatggcgg
ctcccaggatgccacgagttcctggcagctcttggttttgatctctgtgaagtgggtcag
gaggaagttatcctgaaaactgggaaacaagcgagtcggcgcaccatgcactttgcgctc
cagtccctgctgtctctttttgattccacagagctccccaagcgcctcagcctggacagt
tcatcctctctggagtcgctggcatcagcccagtctgtctccaatgctctgcccctgggc
taccagcatccacccttctcacccactggtgccgaaagcattgcctctgatgccatctct
gtgtacagtctgagctccattgcctcctccatgagctttgtctccaagcctgagatgggg
tcagaagctggaggccccagaggacggcaggactacgacaggcccaagaataccttcccc
cagcaatcaaccctacctcggacccagctatccccgcagactcgtcctgctgacagcaaa
gaagaggaggaatacgagggcttctccatcatcagcacagagcccctggcagcctaccag
gagagcaaaaagacgcgcttctccccagaccacaggcagccccacgctggggcagctgca
ggtgtgaaggtttcggtcagttccaagggcagcgtgagcactccaaattccccagtgaag
atgactctgatcccaagcccaaactcgcccttccagaaggtagggaagttagcaagctca
gacacgggtgagtcggaccagtccagcaccgagacagacagcacagtgaagtcccaagaa
gaaagcaatccaaagctagatccccaggagctggctcagaaaatcctagaggagacgcag
agtcacttgattgcagtagagcgtcttcagaggagtggcagtcaggtgggcaagagtcat
aatcgggaagatggtgtgtcagtgccaaatagcagtgccactgtcttcagggcatcagaa
acaagcgccttcagcaggcctgtgctatcccaccagaaaagtcagccatccccagtcact
gtcaaaccaaagcccccagccaggagctcatctctgcccaaggtgagctctgggtacagc
agccctaccacttcagaggcatccctcaaagacagtccaaaccagcacagtggccgcccg
tcccccagctgtgactcccaggcctccttgtctgatcaaccgctctttaaactgaagtat
cccagctctccttacagtgcacacatttccaagtcaccacggaacatgtcgccaagctca
ggccaccaatcccctgctggtagtgccccatcccctgcactctcctactcctcagcgggt
tctgcacgctcaagtccagctgatgctcctgacctggacaagcttaagctggcagccatc
gacgagaaggtacaggccgtgcacaacctgaagatgttctggcagaacacagccccacat
gccacaggtcctgtgaaaccagcacgtgcgccaccaggaaccatgacctccaagagagat
gtgctcagcctgctaaacctgtcacctcggcacaacaagaaggaggaagaggcagataag
ctggaacttcaggagctgtctgtgcagcggcgggacgagggcccccccagagcccctcct
aatggccattggcgcaccgagactacagctttgggcccgctgctgcccaccagccctctc
gccctggcacctgaacgccccctaagactcccttctgctaatggctacaagttcctctcc
ccgggaaggtttttcccttcttccaaatgctaa
DBGET
integrated database retrieval system
