KEGG   Cavia porcellus (domestic guinea pig): 100727762
Entry
100727762         CDS       T07777                                 
Symbol
Polr2i
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
cpoc  Cavia porcellus (domestic guinea pig)
Pathway
cpoc03020  RNA polymerase
cpoc03420  Nucleotide excision repair
cpoc05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:cpoc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100727762 (Polr2i)
  09124 Replication and repair
   03420 Nucleotide excision repair
    100727762 (Polr2i)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    100727762 (Polr2i)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cpoc03021]
    100727762 (Polr2i)
   03400 DNA repair and recombination proteins [BR:cpoc03400]
    100727762 (Polr2i)
Transcription machinery [BR:cpoc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     100727762 (Polr2i)
DNA repair and recombination proteins [BR:cpoc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      100727762 (Polr2i)
SSDB
Motif
Pfam: Zn_ribbon_RPB9 Zn_ribbon_TFIIS Zn_ribbon_recom Ogr_Delta Zn_ribbon_GRF_2 HVO_0758 TtuA_LIM_N Zn_ribbon_NrdR
Other DBs
NCBI-GeneID: 100727762
NCBI-ProteinID: XP_003467274
Ensembl: ENSCPOG00000012097
UniProt: H0VKN8
LinkDB
Position
Unknown
AA seq 125 aa
MEPDGTYEPGFVGIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITH
EVDELTQIIADVSQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCG
HRWTE
NT seq 378 nt   +upstreamnt  +downstreamnt
atggaacccgacgggacctacgagccgggcttcgtgggtattcgattctgccaggaatgt
aacaatatgctgtaccccaaagaggacaaggagaaccgtattctgctgtacgcgtgccgg
aattgtgattaccagcaggaagccgataacagctgcatctacgtcaacaaaattacacat
gaagtggacgagctaacccagataatcgctgatgtgtcccaggaccccacgttgccacgg
accgaggaccacccgtgtcagaagtgcggccacaaggaggcagtgttcttccagtcacac
agtgcccgtgctgaggatgctatgcgcttgtactatgtatgcactgccccacactgcggc
caccgctggaccgaatga

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