Cavia porcellus (domestic guinea pig): 100727785
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Entry
100727785 CDS
T07777
Symbol
Taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100727785 (Taf5l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpoc03021
]
100727785 (Taf5l)
03036 Chromosome and associated proteins [BR:
cpoc03036
]
100727785 (Taf5l)
Transcription machinery [BR:
cpoc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100727785 (Taf5l)
Coactivators
SAGA/TFTC/STAGA complex
100727785 (Taf5l)
Chromosome and associated proteins [BR:
cpoc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
100727785 (Taf5l)
STAGA complex
100727785 (Taf5l)
TFTC complex
100727785 (Taf5l)
SAGA complex
100727785 (Taf5l)
SLIK complex
100727785 (Taf5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
TFIID_NTD2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_HPS5
RMC1_N
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_Vps41
WD40_RFWD3
PEP5_VPS11_N
PROPPIN
Beta-prop_IP5PC_F
Ge1_WD40
WD_LRWD1
WDR54
vATP-synt_AC39
Mala_s_1-like
Motif
Other DBs
NCBI-GeneID:
100727785
NCBI-ProteinID:
XP_003473473
Ensembl:
ENSCPOG00000006299
UniProt:
H0VX13
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MKRVRTEHVQMAVSCYLKRRQYVDSDGPLKQGLRLSQTAEEMAANLTVQSESGCANIVSA
APCQAEPQQYEVQFGRLRNFLTDSDSQYSHEVMPLLYPLFVYLHLSLVQNSPKSTVESFY
SRFHGMFLQNASQKDVIEQLQTTQTIQDILSNFKLRAFLDNKYVIRLQEDSYNYLIRYLQ
SDNNSALCKVLTLHIHLDVQPAKRTDYQLYASGGSSRSESSGLEPPDMPSPILQNEAALE
VLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEIAPDSKLLAAGFDNSCIKLWSLRSK
KLKSEPHLVDTSRIRLACDTLEEEEDEEDNIGTEMKILRGHCGPVYSTRFLSDSSGLLSC
SEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLR
IYAGHLADVDCVRFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNG
KYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLVASASMDNSVRVWDLR
NTCCSTPADGSSSELVGVYTGQMSSVLSVQFMACNLLLVTGITQENQEH
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgggtgcgcaccgagcacgtccagatggcagtgtcctgctacctcaagcgccgg
cagtacgtggattccgatggccccctgaagcaaggcctgcgtctgtctcagactgctgag
gagatggcagccaacctcacagtccagtcagagtctggttgcgccaacatagtgtctgca
gccccttgccaggcagaaccccagcaatacgaagtacaatttggacgactgcgaaatttc
ctcactgattccgattcccagtacagccatgaagttatgcctctcctctacccactgttt
gtctacctccatctcagcctggtccagaacagcccgaagagcacagtggaaagtttctat
agccgcttccatggaatgttcctacagaatgcaagccagaaggatgttattgagcagctg
cagacgactcagacgatccaggacatcctgtccaacttcaagcttcgtgcattcctagat
aacaagtacgtgatccgtctccaggaagacagctacaactacctgatccgctacctccaa
agtgacaacaacagtgctctgtgcaaggtcctcaccttacatatccacctggacgtgcag
cctgccaagagaacagactaccaactctatgccagtggtggctcctcccgcagtgaaagt
agtggcctggagcccccagatatgcctagccccattctgcagaacgaggctgccctagag
gtcttacaggagagcatcaaacgcgtaaaggatggccctccctccctcactaccatctgc
ttttatgccttctacaacacagagcagctgctcaacactgcagaaattgcccctgatagc
aagctgcttgctgctgggtttgacaactcctgcataaaactctggagtctgcgatccaag
aagttgaagtcagagccccatctcgtagacacgtcacgtatccgcttggcttgtgatact
ctggaggaagaggaggatgaggaggacaacataggcacagagatgaagatcctgcgggga
cactgtggaccagtgtatagcacacgtttcctctcagatagctcagggttgctctcttgt
tctgaggacatgtccatccggtactgggatctggggagtttcaccaacactgtgctgtac
caaggacatgcctaccccgtgtgggacctggacatcagcccctacagcctatactttgcc
agtgggtcccatgaccgcactgccaggctgtggtccttcgatcggacgtacccactgagg
atatatgcaggacacctggcagatgtggactgtgtccgattccaccctaactctaactac
ttagccacaggctcaactgacaagactgtccggctgtggagcacccagcaggggaactca
gtgaggctcttcacaggccaccgtggccccgtgctgtctctggctttctctcccaatggg
aaatacttggcatctgctggtgaggaccagcggttgaaactttgggacctggcctctggg
accctttttaaagagctgagaggccacacagacagtatcaccagcctcgccttcagccct
gacagtggcctagtggcctctgcctccatggacaactcagtgcgtgtttgggacctccgg
aacacatgctgtagcacacccgcagatggctcctccagtgagcttgtaggtgtctacact
gggcagatgagcagtgtcctgagtgtgcagttcatggcctgcaatctgcttctggtgact
gggatcacacaggagaatcaggagcactga
DBGET
integrated database retrieval system
