Cavia porcellus (domestic guinea pig): 100727953
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Entry
100727953 CDS
T07777
Symbol
Rapgef1
Name
(RefSeq) rap guanine nucleotide exchange factor 1 isoform X2
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc04015
Rap1 signaling pathway
cpoc04510
Focal adhesion
cpoc04722
Neurotrophin signaling pathway
cpoc04910
Insulin signaling pathway
cpoc05211
Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
100727953 (Rapgef1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100727953 (Rapgef1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
100727953 (Rapgef1)
09156 Nervous system
04722 Neurotrophin signaling pathway
100727953 (Rapgef1)
09160 Human Diseases
09162 Cancer: specific types
05211 Renal cell carcinoma
100727953 (Rapgef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
100727953
NCBI-ProteinID:
XP_005004003
Ensembl:
ENSCPOG00000009942
UniProt:
H0W2V0
LinkDB
All DBs
Position
Unknown
AA seq
1263 aa
AA seq
DB search
MGNAVEKQKPLRQSSLCPWKQDSQRSHLSSFTMKLMDKFHSPKIKRTPSKKGKPAEVSVK
MPEKPVNKEARDRFLPEGYPNPSDLEQQAVEFMSTSAVASRSQRQKNLSWLEEKEKEVVS
ALRYFKTIVDKMAIDKKVLEMLPGSASKVLEAILPLVQTDPRVQQSSALSSCYSRVYQSL
ANLIRWSDQVMLEGVNSEDKEMVTTVKGVIKAVLDGVKELVRLTIEKQGRPSPTSPVKPS
SPAGKPDGQPELPLNDREMEILNKTTGMSPSAELLADAADEEVAPPKPPLPGIRVVDNSP
PALPPKKRQSAPSPTRVAVVAPMSRATSGSSLPVGINRQDFDLDCYTQRRLSGGSHSYGG
ESPRLSPCSSMGKLSKSDEQLSSLDRDSGQCSRNTSCETLDHYDPDYEFLQQDLSNTDQI
PQQVACNLSPLPESSGESGSPFLGPPFQLPLGSCALPEGPSATGLQMDTPPALPEKKRRS
AASQTTDSSGCRVSYTRHPSQYDNVSEDDLRGSTPAPAGPYSPFAALLPLQQGGSSTPLE
FVGDFTTPESAGDPEKPPPLPEKKNKHMLAYMQLLEDYSEPQPSMFYQTPQSEHIYQQKN
KMLMEVYGFNDSFSSGDPTQELAPPPALPPKQRQLASYAASSFSSVSHCVQQTKVAFTPD
DGSATQGLSVSMSNSFLSRHGSLPVPSYKSVFRSYSQDFVPHRQASVHPFLPPTSSSSPH
FPPVHLSPSSDLAGPAVASPPARTVDGPRSPSQESSFHGSPVCLPPESSFADSSENTSEE
AGEGEYVSLYSSGQSSVERARPRGESPTGKDGHSRDPSAGGSTPGKDGRDGSERVPKSPD
ALESAHSEEEVDELSLIDHNEIMARLTLKQEGDDGPDVRGGSGDILLVHATETDRKDLVL
YCEAFLTTYRTFISPEELIKKLQYRYEKFSPFTDTFKKRVSKNTFFVLVRVVDELCLVEL
TEDILKLLMELVFRLVCSGELSLARVLRKNILDKVDQKKLLRCANSDQPLAARGVAARPG
TLHDFHSHEIAEQLTLLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVR
SIIMLQEKAQDRERLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEGL
AEYCTLIDSSSSFRAYRAALSEVEPPCIPYLGLILQDLTFVHLGNPDYVDGKVNFSKRWQ
QFNILDSMRCFQQAHYDIRRNDDIISFFNDFSDHLAEEALWELSLKIKPRNITRRKTDRE
EKT
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgggcaatgctgtggagaagcagaagcccctgagacaaagcagtctgtgtccctggaag
caagactctcagcgctctcacctctcctccttcaccatgaagctgatggacaaattccac
tcgcccaaaatcaagaggacgccatcgaaaaagggcaagccagccgaggtgtctgtgaag
atgccggagaagcctgtcaacaaagaggcaagagacagatttctaccagagggctaccct
aacccctcggatctggagcagcaggcagtagagtttatgtccaccagtgctgtggcttcc
aggtcccagaggcagaagaacctgagctggctggaagagaaggagaaggaagtggtcagc
gccttgcgctactttaagaccattgtggacaaaatggccatcgacaagaaggtgctggag
atgctgccaggctccgccagcaaggtgctggaggccatcctgcccctggtgcagaccgac
ccgagggtccagcagagctcggccctgtcatcctgctacagccgcgtgtaccagagcctc
gccaacctcatccggtggtcagaccaggtgatgctggaaggtgtgaactcagaggacaag
gagatggtgacgaccgtgaagggcgtcatcaaggctgtgctggacggagtgaaggagctg
gtcaggctgaccatcgagaagcagggccggccgtctccaaccagcccagtgaaacccagt
tccccagccggcaagcccgacggccagcccgagctccccctgaatgatcgagagatggag
attctgaacaaaacgacagggatgtcgccgtcagctgagctgctcgcggatgctgcagac
gaagaggttgcaccccccaagcctcctctgcctggcatccgggtggtggataacagtccc
ccagcactgccacccaagaaaaggcagtctgctccgtcccctacccgagtggccgtggtg
gcgcccatgagtcgagccaccagcggctccagtttgcccgttggaattaaccggcaggac
ttcgatttggactgttacacgcagaggcggctgtcaggaggcagccactcatacggcggg
gagtcaccccgcctgtccccctgcagcagcatggggaagctcagcaagtctgacgagcag
ctgtcctccctggacagggacagtgggcagtgctcccggaacacaagctgtgaaacacta
gatcactatgaccccgactacgaatttctacagcaagacctctccaacacggaccagata
cctcagcaggtggcctgcaacctcagcccgctgcccgagtcctcaggggagtctgggtct
ccgttcctcggcccccctttccagctgccacttggcagctgtgccctgcccgaaggcccc
tcggccacaggactgcagatggacaccccgcccgccctgccagagaagaagcgcaggagc
gcggcctcgcagaccacggacagctccggctgccgagtgtcctacacacggcacccctca
cagtatgacaacgtctcagaggatgacctacggggctccactccagcaccggctggcccc
tactcgcccttcgccgcgctccttcccttgcagcagggaggctcctcgacacccttggag
tttgtgggtgatttcaccactcccgaatcagcaggcgaccccgagaagccacctcccctg
ccggaaaagaagaacaaacacatgctggcctacatgcagctgctggaggactactcagag
ccgcagccctccatgttctaccagacaccacagagcgagcatatctaccagcagaagaac
aagatgctcatggaggtgtatggcttcaatgactccttcagcagcggggaccccacacag
gagctggccccaccgcccgccctgccccccaagcagcggcagctggcctcctatgctgct
tcttccttctcctctgtctcccactgtgtccagcaaactaaagtggccttcacccccgac
gacggcagtgccactcagggcctcagtgtgtccatgtctaactcctttctcagccggcac
ggcagcttgcctgtgccctcgtacaagtctgtgtttaggtcctactcccaggacttcgtg
cctcaccgccaagcttccgtccaccctttccttccgcccacctcctcttcctctccgcat
ttcccacctgtccacctgtctccgagctcggatttggcgggccccgccgtagccagcccg
cctgcccgcaccgtggatgggcctcgctcaccttcccaggagagcagcttccatgggagc
cctgtctgccttcctcccgaaagctctttcgctgactcgagcgagaacaccagcgaggag
gctggtgagggtgaatacgtcagtctgtattcctctggccagagcagtgtggagcgggct
cgccctcgaggagagtcgccaactgggaaagatgggcactccagggacccttcagcaggc
ggcagcacacctggcaaagatggcagagatggcagcgagagggtcccgaagtcgccggat
gctctggagtcagctcattcagaggaggaagtggacgagctgtccctcatcgaccacaac
gaaattatggccaggctgacgctcaagcaggagggtgatgacgggcccgatgtgcgtgga
ggatcaggagacatcctgctggttcatgctactgagacggacaggaaagacctggtgctg
tactgcgaggccttcctgaccacctacaggaccttcatcagccccgaggagctcatcaag
aagctgcagtaccgatatgagaagttctcgcccttcactgacacgttcaagaagcgtgtg
agcaagaacacattcttcgtgctggtgcgggtggtagacgagctctgcctggtggagctg
acggaggacatcctgaagctgctgatggagctggtcttccgcctggtgtgcagcggagag
ctcagcctggcccgggtgctgcgcaagaacatcctggacaaggtggaccagaagaagctg
ctgcggtgcgccaactccgaccagccccttgcggccaggggtgttgcagccaggcccggg
accctgcatgactttcacagccacgagatcgctgagcagctcacgctgctggatgccgag
ctcttctacaagatagagatccccgaggttctgctctgggcaaaagagcagaatgaggag
aagagccccaacctgacacagttcacggagcacttcaacaacatgtcgtactgggtccgg
tccatcatcatgctgcaggaaaaggcccaggacagggaacggctgctcttaaagttcatc
aaaatcatgaagcacctgcggaagctgaacaacttcaactcctacctggccatcctctca
gcattggactcggcgcccatccgcaggctggagtggcagaagcagacctcggagggcctg
gctgagtactgcacactcatcgacagctcgtcctccttccgtgcctaccgggccgccctc
tcggaggtggagcccccgtgcatcccctacctgggtctgatcctgcaggacctgaccttc
gtccacctcggcaaccctgactacgtggatggcaaggtgaacttctccaagcgctggcag
cagttcaacatcctggacagcatgcgctgctttcagcaggcacattatgacatccggaga
aatgatgacatcatcagtttcttcaacgacttcagtgaccacctggccgaggaagccctg
tgggaactctctctgaaaatcaagccccggaacataacccggaggaagacagaccgggag
gagaagacctag
DBGET
integrated database retrieval system
