Cavia porcellus (domestic guinea pig): 100728001
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Entry
100728001 CDS
T07777
Name
(RefSeq) X-ray repair cross-complementing protein 5 isoform X2
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
100728001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpoc03400
]
100728001
DNA repair and recombination proteins [BR:
cpoc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
100728001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku_N
Ku
Ku_PK_bind
Ku_C
Motif
Other DBs
NCBI-GeneID:
100728001
NCBI-ProteinID:
XP_003462130
Ensembl:
ENSCPOG00000012213
UniProt:
H0VKX8
LinkDB
All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
MARYGNKAAVVLCVDVGFAMSNSFPGEESPFEQAKKVMTMFVQRQVFAESKDEIALVLFG
TDGTNNALAAGDQYQNITVHRHLMLPDFDLLEDIDSRIQPGSQQADFLDALIVCMDVIQR
ETVGKKFEKRHIEVFTDLSSPFSKDQLDIIIHNLKKSGISLQFFLPFPIGKKDGTGDRGD
GNLQMGDHGSSFLQKGITEQQREGIHMVRKMMLSLEGTNGLEEIYSFSESLRQLCVFKKI
ERHSMPWPCQLTIGSNLSIKIVAYKSIVQEKVKKTWIVVDARTLKKEDIQKETVYCLNDD
DETEVSKEDTIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCRSSQVQRKFFMGNQ
VLKVFPARDDEAAAVALSSLIHALDELDMVAIVRYAYDRRANPQVGVAFPFIKEAYECLV
YVQLPFMEDLRQYMFSSLKNNKKYTPTEAQLDAVDAFIDSMSLIEKDEEEDTIKDLFPTA
KIPNPEFQRLFQCLLHRALHPQEPLPPIQQHILSMLDPPTEVTAKCEIPLSKIKTLFPLT
EAIKRKDQVTAQEIFQDNLEEGLTIKKQKTEEGEAQFSVSSLAEGSVTKVGSVNPAENFR
ALVRQKNASFEEASHQLVNHIEQFLDTNEIPYFMKSLDCIKAFREEAIKFSEEQRFNSFL
KALREKVEIKQLNHFWEIVVQDGITLISKDEASGSSVTSEEAKKFLAPSKKGDEDTAAVL
EEGGDVEDLLDMM
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgatacgggaataaggcagctgttgtgctatgtgtggatgtaggctttgccatg
agtaactcttttcctggtgaagaatccccatttgaacaagcaaagaaggtgatgaccatg
tttgtccagcgacaggtgtttgcagagagcaaggatgagattgctctggtcttgtttggt
acagatggcactaacaatgcacttgctgctggggaccagtaccagaacatcacagtgcat
agacacctgatgctgcctgattttgatttgctggaggacattgacagcaggatccaacca
ggttctcaacaagctgactttctggatgcactgattgtgtgtatggatgtgattcagcgt
gaaactgtgggaaagaagtttgagaagcggcacattgaagtgttcactgacctcagcagc
ccattcagcaaagatcagctggatattataattcataatttaaagaaatctggcatctcc
ctacaattctttttgcctttccccattggcaagaaagatggaactggagacagaggagat
ggcaacttgcagatgggtgaccatgggtcctcttttcttcaaaaaggaatcactgagcag
caaagagaaggtatacatatggtgaggaagatgatgctgtcgttagagggcaccaatggg
ctggaggaaatttattccttcagtgagagtctcagacaactgtgtgtctttaagaaaatt
gaaaggcattccatgccctggccctgccaactgaccattggctccaatttgtctataaag
attgtagcctataaatcgattgtacaggagaaagttaaaaagacttggatagttgtggat
gcacgaaccctaaaaaaagaagatatacaaaaagaaacagtttattgtttaaatgatgat
gatgaaactgaagtttccaaagaagacactattcaagggttccgctatggaagtgatatc
gttcctttctctaaagtggatgaggaacaaatgaaatataaatcagaggggaagtgcttt
tctgttttgggattttgtagatcttctcaggtccaaagaaaattctttatgggaaatcaa
gttttaaaggtctttcctgcacgtgatgatgaagcagcagcagttgcactttcctccctg
attcatgctttggatgaattagacatggtggccatagttcggtacgcttatgacagaaga
gctaatccccaagttggtgtggcttttccttttatcaaggaggcctatgagtgtttagtg
tacgtgcaactgcctttcatggaagacttgcggcaatacatgttttcatccctgaaaaat
aataagaaatacactcccacggaggcacagttggatgctgtggatgcttttattgactct
atgagtttaatagagaaagatgaagaggaagacactatcaaagacttgtttccaactgcc
aaaatcccaaatcctgaatttcagagattatttcagtgtctgctgcacagagctttacat
ccccaggaacctctgcctccaatccagcagcatattttgagtatgctggatcccccaact
gaggtgacagcaaagtgtgagattcctctctccaaaataaagaccctgttccctctgact
gaagccatcaagcgaaaggaccaagtaactgctcaggaaattttccaagacaacctggaa
gagggactgaccattaaaaaacaaaaaactgaggaaggggaagcccagttcagtgtctct
agcctggctgaaggcagtgtcaccaaggttgggagtgtgaatcctgctgaaaacttccgt
gcactggtgagacagaagaatgctagctttgaggaagcaagtcaccagctagtaaaccac
attgagcagtttttggatacaaacgaaataccttattttatgaagagcttggactgcatc
aaagccttccgggaagaagccattaagttttcagaagaacagcgctttaacagtttcctg
aaagcccttcgagagaaagtggaaattaaacagttaaatcatttctgggaaatcgttgtt
caagatggaattactctgatcagcaaagatgaagcttctgggagctctgtcacatctgag
gaagccaaaaagtttctggctcccagcaagaaaggagatgaagatactgcagctgtattg
gaagaaggcggtgatgtggaggacttactggacatgatgtag
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