Cavia porcellus (domestic guinea pig): 100728053
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Entry
100728053 CDS
T07777
Symbol
Ddx17
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17 isoform X2
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpoc03041
]
100728053 (Ddx17)
Enzymes [BR:
cpoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100728053 (Ddx17)
Spliceosome [BR:
cpoc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100728053 (Ddx17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100728053
NCBI-ProteinID:
XP_003470541
Ensembl:
ENSCPOG00000011790
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MRGGGFGDRDRDRDRGGFGARGGGGLPPKKFGNPGERLRKKKWDLSELPKFEKNFYVEHP
EVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQC
QGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQ
VQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRC
TYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINV
GNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMR
RDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSS
EDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVDHRGGGG
GGGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSTSYRDRSETDRAGYANGSGY
GSPNSAFGAQAGQYTYGQGTYGAAAYGTSGYTAQEYGAGTYGASSTTSTGRSSQSSSQQF
SGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPPPSRK
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggaggcggctttggggaccgggacagggaccgggaccgtggcggatttggagca
agaggtggtggtggacttcctccgaagaaatttggtaatcctggggagcgtttacgtaaa
aagaaatgggatttgagtgagctccccaagtttgaaaaaaatttttatgtggaacatcca
gaagtggcaaggctgactccatatgaggttgatgagctacgccgaaaaaaagagattaca
gtgcgagggggagatgtttgtcctaagcctgtctttgccttccatcatgctaacttccca
caatatgtgatggatgtgttgatggatcaacactttacagaaccaactccgattcagtgc
cagggatttccgttggctcttagcggccgggatatggtgggcattgctcagacaggctct
gggaagacattggcgtatctactgcctgcaattgttcacattaaccaccagccatacttg
gaaaggggagatggcccaatctgtctagttctggctcctaccagagagcttgctcagcaa
gtacagcaggtagctgacgactatggcaagtgttcaagattgaagagtacttgcatttat
ggaggtgctcctaaaggcccccagattcgagacttggaaagaggtgttgagatctgcata
gctactcctggacgcctgatagatttcctagagtcaggaaagacaaacctgcgccgctgt
acttacctggttctggatgaggctgacagaatgcttgatatgggctttgaacctcagatc
cgtaaaattgttgaccaaatcaggcctgataggcagacattgatgtggagtgcaacttgg
ccgaaagaagtaaggcagcttgcagaggatttcttgcgtgattacactcagatcaatgtg
ggcaatctggagttgagtgccaaccacaacatccttcagattgtggatgtctgcatggaa
agtgaaaaagatcacaaattgatccaactgatggaggaaataatggctgaaaaggaaaat
aagaccataatatttgtagagacaaagagacgctgtgatgaccttactcgaaggatgcgc
agagatggttggccagctatgtgtattcatggagataagagtcagccagaaagagattgg
gtacttaatgaattccgttctggaaaggctcccattctcattgccacggatgtagcctcc
cgtgggctagatgtggaagatgtcaagtttgtcatcaactatgactacccaaacagctca
gaggattacgtgcaccgaattggccgaacagcccgaagcaccaacaagggcactgcttac
accttcttcaccccagggaacctaaagcaggccagagagctgatcaaagtgcttgaagag
gctaatcaggccatcaatccaaaactgatgcagctggtggaccacagaggaggcggcgga
ggagggggaggtcgctctcgataccggaccacttcttcagccaacaatcccaatctgatg
tatcaggatgagtgtgatcggaggcttcgaggagtcaaagatggaggccggagagactct
acaagctatcgggatcgtagtgagaccgatagagccggttatgctaatggcagtggctat
ggaagtccaaattccgcctttggagcacaagcaggccaatacacctatggtcaaggcacc
tatggggcagctgcttatggcaccagtggctacacagcccaggagtatggtgctggcact
tacggagctagcagcaccacctcaactgggagaagttcacagagctctagccagcagttt
agtgggataggccggtctgggcagcagccgcagccactgatgtcacaacagtttgcacag
cctccaggagctaccaatatgataggttacatggggcagacggcctaccagtacccccct
ccacctcctccccctccgccttctagaaaatga
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