Cavia porcellus (domestic guinea pig): 100728146
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Entry
100728146 CDS
T07777
Name
(RefSeq) LOW QUALITY PROTEIN: chondroitin sulfate proteoglycan 4-like
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cpoc00535
]
100728146
04091 Lectins [BR:
cpoc04091
]
100728146
Proteoglycans [BR:
cpoc00535
]
Cell surface proteoglycans
Others
100728146
Lectins [BR:
cpoc04091
]
C-Type lectins
Others
100728146
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
100728146
NCBI-ProteinID:
XP_013008282
LinkDB
All DBs
Position
Unknown
AA seq
1649 aa
AA seq
DB search
MQTRETARAVDGLGTDPVVDMRAGKPVSFYGESYVELSNIEVSSELSLQLKFQASKPQGL
LFLAAXKSDYCIIELLSGNLWVRVNLGTGEQVLFHEQRLRVDDLVWHLVELYFIKDNFSL
LTDKHYETSGQVAGGMHSFNFQHGIHIGGHGGLNVSYLDGKVPDFRGCMEDVVFNYTEIL
ISLRSYPGFKKVYDMSLGCSEQFFVGEDEAINFCSSRSYVTFPEWEVQGGGVLEFALQTG
TQQVLLLFQSGKEDFVALEIHEGWLKAHIGMNTSKTELSSFXISDTKWHAIQLXVTGGHL
DLMVDERGVRTLLLLQNKPFISKGPLFVGGLDNQLWKDVKMLDLASVPRKSFRGISLKGC
LQDLKANSQKRALRNALVSKDISSGCKIKNTDNATPSVITLANLPQSEAFHSTIVPDAVN
FFQDQSSSFLVLNSLEVQEDGQTLLEQKHMKVNMEFKELVFNCSQILFTIKEMPIHGFLQ
LDVSSEEERAKAFTMLDLQQGKVWYVHDGSEEPMDYFTFLITSKNQKEMPFYLQDHDPYV
FNINVIPVNDPPYLKLPEGNMLLFENLKKRLTPNIIQVSDSDTDSLSLGFSVFGNFNLDA
GFLENANEPGRTINGFTHTNLTDGNIFYVHRGLRNSRIVLRASDGELVSNTAMLRVMAVP
WNFEVASRTDVVVPRGGTVLITLSNLSVEVNGEYHEMETHYDITHPPQFGQIQHWGSHGK
WKQVSNFSQHSINKSWVRYYSTFKELQQENVTDHFKFKVTIEGKVSKELMLPVTVQWLKF
TLVKNVLLEINTMNKEVLNSDHLQATTEGVEVAEREIYFKLLTPPKKGKLLFDNQVLKTN
SIFSQKNITDSQISYEPQQRPREDSWDTCKFLIIAKHIEXKCYIFRILLKADETCIILTN
RELLVKEGEGKLITQSELFVQTXDNHIFQYKVIKSPQHGSLKLISFSDTLESNDSITAFT
DQNIASETQSDEFFVVVFPHQEGVAKDFDLEHLSTEIKVNISVELQNDEWLVHVVDKAFH
VVWNGQHLLTLADLCYHDPDLDFDDGQLLYTRRDIPNGELVRASNPMXKLYQFTQEDLWE
GRVLFKHQGADSARFVLFVTDGVHYTSSFLEVIVSDPYVQIANNTKLLVQRGKDSCLTAA
NLSITTNQDVRADVEVEFHIAWPPKHGRILVSNSVSSSFFQHDLKKGHVIYRHDGSGNSD
TFNLTVKLKDAYLEVGVCVQVELEDHHHHSKVWHRKTPIVEEGKPVKLSRGRLQVSWNEY
NIPSEAAFMVRTPPMHGYLQKFTPEEGSLSLDEKFPLSFTQQDVDDGNILYVQTAPAQKQ
DHFFLDVINGFKIVSEMEILLDIVPKLIPLEMQNFTVQEGGSRALLEDYLKIPSKYFEGL
DCEFVLLDPPKHGYVESSHFPGVKLMRFTRKQFRMVQCPGNCMCVNGKGKNSSRLSEKGL
ETSSFSLREETGVGRCKQRITQCALNRTDDSNRKSKSATKPEAGFLELFNITITPVNDQA
PELKTKGLRLQVLQGSRLVVGPEILKVEDPDSPPDEIRYVIIHNPNDGFMAIANHSAVPC
HQFTQVDIDSCQVWFTQDGSPSSGVFYFSVTDGKHRPHYKLFHLDVSPISITLVNLTELL
LPQARQLFLSPVLTCQQLAMERAPRSFTG
NT seq
4950 nt
NT seq
+upstream
nt +downstream
nt
atgcagaccagagagactgcaagggcagtggatgggctggggacagatcctgtggtggac
atgagagcagggaagccagtgtctttttatggtgaaagctatgtggagctcagcaacata
gaagtttcctctgagctatctcttcaattaaaatttcaagccagcaaacctcagggatta
ctttttcttgcagcttagaaaagtgactattgcataatagaacttctatcaggaaactta
tgggtgagagtgaatttgggcacaggtgaacaagtgcttttccatgagcaaagacttcgt
gtggatgacttggtgtggcatttggtggaactgtattttattaaggataatttttccttg
cttactgataaacattatgagacaagtggccaagtggctggtgggatgcatagttttaac
tttcaacatggaatccacataggaggccatgggggacttaatgtctcttatctagatgga
aaggtccccgacttccgaggatgtatggaggatgtggtatttaactatacagagatccta
atatctcttcgatcttaccctgggtttaagaaagtttatgacatgtcactaggatgcagt
gaacagttttttgtaggggaggatgaagccatcaatttctgtagctctagatcctatgtc
acctttccagaatgggaggtgcaagggggaggggtattggaatttgctttgcaaactgga
actcagcaagtcttgcttttatttcagtcaggtaaggaagattttgttgccttagaaata
catgagggttggttgaaggctcacataggaatgaatacaagtaaaactgagctttcttct
tttnnaattagtgacaccaaatggcatgctattcaactctaggtcacgggaggacatttg
gatctcatggtagatgaacgtggagtaaggacattgctgcttttgcaaaataagccattt
atatcaaaaggccccctttttgtaggaggtcttgacaatcaactgtggaaagatgtgaag
atgttagaccttgcctctgtgcctaggaaatcttttcgaggaatctctttgaaaggctgc
ttacaagacttgaaagcaaactcacaaaagagagcattgaggaatgccttagtttccaaa
gatatttcttctgggtgcaaaatcaagaatactgataatgcaactccttctgttataaca
ctagcaaatctgcctcagtcagaggctttccattccaccatagtccctgatgctgtcaac
tttttccaagatcaaagtagctcttttttggttttgaatagcttggaggttcaagaagat
ggtcaaaccctactggaacaaaagcatatgaaggtgaatatggaatttaaggaattggtt
ttcaattgttctcaaatactgtttacaataaaggaaatgcctattcatgggttccttcaa
ttagatgtttcatctgaggaagaaagggcaaaggcttttactatgttagatttacagcaa
ggaaaggtgtggtatgtccatgatggttcagaagaacctatggattacttcacatttttg
atcacttctaagaatcagaaggaaatgccattctatctgcaggaccatgatccctatgtc
tttaacattaatgtcatcccagtgaatgaccccccttatcttaaactcccagaaggaaac
atgcttttgtttgagaacttgaagaaaaggctgaccccaaatataatacaggtgtcagat
tctgacacagattctttgagtcttggtttttcagtttttggcaacttcaatttagatgct
ggatttttagaaaatgccaacgaacctggaagaaccataaatggcttcacacacacgaat
ttaacagatggcaacattttttatgtgcaccgtgggcttcgcaactctcgaattgtcctg
agagcaagtgatggtgagctggttagcaacacagcaatgttacgggttatggctgttcct
tggaactttgaagtggccagtaggactgatgtggttgtaccacggggtggtactgttctg
attacactgagtaacttatcagtggaggttaatggtgaatatcatgagatggagactcac
tatgacatcactcacccacctcagtttggccagattcaacattgggggtcacatgggaaa
tggaaacaagttagtaacttttctcagcattccatcaataagagttgggttcggtactat
agtacattcaaagaactacagcaggaaaatgttacggatcattttaaatttaaagttacc
atagaaggaaaggtcagcaaagagctcatgcttcctgtgactgtacaatggctgaaattt
acacttgtgaaaaatgttcttctagagatcaatactatgaacaaggaagtattgaattca
gatcatttgcaggctacaacagaaggtgtggaagtagcagagagggaaatatatttcaag
ttactgactccacctaagaaaggaaaattgctatttgacaatcaagttttaaaaaccaac
tcaatattcagccaaaaaaatattacagactctcagattagttatgaacctcagcagagg
ccaagggaagactcatgggatacttgtaaatttttgattattgcaaaacacatagaataa
aaatgttatattttcagaatactcttgaaagcagatgagacatgcattattctaacaaac
agagaattgcttgtaaaagaaggggaagggaaattgatcacacaatcagaattatttgtt
caaacctgagacaatcatatcttccaatataaagtcattaagagtcctcagcatgggagc
ctgaaattgattagcttttcagataccctggaaagtaatgacagtatcacagcattcact
gatcagaacatagcgagcgagacgcagagtgatgagttctttgttgtggtatttccacac
caggaaggagttgccaaggattttgatttggagcatttatctacagaaatcaaagtcaac
atttctgttgaattacaaaatgatgaatggctagtgcatgtagtagataaggcatttcat
gttgtgtggaatggccagcacttattgaccctggcagacctctgttaccatgaccctgac
ttagattttgatgacgggcagttgctgtacacccggcgggacattccaaatggagagttg
gtacgagctagcaaccccatgngaaaactttaccagttcacccaggaagatctgtgggaa
ggacgcgtcctcttcaaacatcagggtgcagactctgcccgctttgtgctatttgtgaca
gatggtgttcattacacttcatcctttcttgaggtcattgtgtcagacccctatgttcag
atagcaaacaacaccaagcttcttgtacagagaggaaaagacagctgcctcacagcagct
aacctgagcattaccacaaaccaagatgtcagagcagatgtcgaggttgagttccacatt
gcgtggcccccaaagcatggcagaatcctagtcagcaattctgtgtcctcatcctttttc
caacatgacttgaagaaaggacatgtgatttataggcacgatggcagtggcaactctgac
acattcaacttgacagtgaaacttaaagatgcatacttagaagtgggggtctgtgttcaa
gtggagttggaggatcaccaccatcacagtaaagtttggcacagaaagacccccatagtt
gaagaaggaaaaccagtaaaactgagcagaggaaggcttcaggtaagctggaatgaatac
aatattccttcagaggcagcgttcatggtaagaactccaccaatgcatggatacctccaa
aagtttacaccagaagaaggcagcttgagcctcgatgaaaagttccctttgagttttaca
caacaggatgttgatgatggcaatatcctttatgttcagacagctcctgcccaaaaacag
gaccattttttcctagatgtgataaatggtttcaaaattgtgagtgaaatggaaatcctg
ttagatattgtccctaaattgattcctctggagatgcagaattttacagttcaagaaggt
ggttccagagcacttctggaagattacctcaaaattccaagtaaatattttgaaggactt
gactgtgaatttgttcttctagatccaccaaaacatggttatgttgaaagctctcatttt
ccaggagtgaagctaatgagatttaccagaaaacagttccgcatggtccagtgcccaggg
aactgcatgtgtgtgaatgggaaggggaagaatagcagcaggttaagtgagaaagggctg
gagacttcatcttttagcctgagggaagagacaggggtgggcagatgtaagcagaggatc
acacagtgtgccctgaacaggactgatgacagtaacagaaaaagcaaatctgccaccaag
ccagaggctggctttcttgagttgtttaatatcaccatcactcctgtgaatgaccaggca
ccagaattaaagacaaaaggacttcgattgcaagtgctgcagggcagtaggttggttgtg
ggacctgaaatcctgaaagtggaggatccagacagtcctccagatgagatcagatatgtg
atcattcataaccccaatgatggctttatggcaatagctaaccattcagctgtaccttgt
caccaatttacgcaagtcgacattgatagctgtcaggtgtggttcacacaagatggaagc
ccatcctctggagtgttttactttagtgtgactgatggcaaacaccgtcctcactacaag
ctctttcacctggatgtcagccccatctccatcactcttgtgaacctcactgaactactt
ctcccacaagccagacaattgtttctatcaccagtgctcacctgtcagcaattagcaatg
gaaagagcccccagatcatttacaggataa
DBGET
integrated database retrieval system
