Cavia porcellus (domestic guinea pig): 100728422
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Entry
100728422 CDS
T07777
Symbol
Usp39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2 isoform X2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100728422 (Usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpoc03041
]
100728422 (Usp39)
Spliceosome [BR:
cpoc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
100728422 (Usp39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
100728422
NCBI-ProteinID:
XP_003469000
Ensembl:
ENSCPOG00000009315
UniProt:
H0VEC3
LinkDB
All DBs
Position
Unknown
AA seq
565 aa
AA seq
DB search
MSSRSKRESRSSTRGKRESESRSSSGRVKRERDREREPEVPSSRGSPVRVKREVEPASVR
DAPAPPVPAVRVKREREADEDSEPEREVRAKNGRVDSEDRRSRHCPYLDTINRSVLDFDF
EKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYE
IIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVL
QALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEML
QAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKL
PHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILA
KFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDL
REYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQ
MITLSEAYIQIWKRRDNDDVNQQGA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtcggtctaaacgggagtctcgtagttccacccgtgggaagcgcgagtccgag
tcgcggagcagctcgggtcgcgtaaagcgagagcgagatcgggagcgggaacccgaggtg
ccaagctctcgaggcagcccggtgcgcgtgaagcgggaggtcgagccggcgagtgtgcgg
gatgccccagcgcccccagtcccggcggtgcgggtgaagcgggaacgtgaggccgacgag
gactcggagcccgagcgggaggtgcgagcaaagaatggccgtgtggattctgaggaccgg
aggagccgccactgcccgtacctggataccattaacaggagcgtgttggattttgacttt
gagaaactgtgttctatctccctctcgcatatcaatgcatatgcctgtctggtgtgcggc
aagtacttccaaggccggggcttgaagtctcacgcctatattcacagcgtccagtttagc
caccacgtcttcctcaacctccacaccctcaagttttactgcctcccagacaactatgag
atcatcgattcctcactggaggatatcacgtatgtattgaaacctactttcacaaagcag
cagattgcaaacttggacaagcaagccaaactgtcccgggcatatgatggaactacttac
ctgccgggtattgtgggactgaataacataaaggccaatgactatgccaatgctgtcctt
caggcgctgtctaatgtccctcctcttcggaactactttctggaagaagataattacaag
aacattaagcgccccccgggggatatcatgttcctgctggtgcagcgttttggggagctc
atgcggaagctgtggaaccctcggaatttcaaggcacatgtgtctccccatgagatgctt
caggctgttgtcctttgcagcaaaaagacttttcagatcaccaaacaaggggatggtgtt
gacttcttgtcttggtttctgaatgccctgcattcagcgctggggggcacaaagaagaaa
aagaagacgattgtgactgatgttttccagggctccatgaggatcttcactaaaaagctt
ccccatcctgatctgccagcagaggagaaggagcagctgctccataatgatgagtaccag
gagaccatggtggagtccacgttcatgtacctgacgctggacctcccgaccgccccgctc
tacaaggacgagaaagagcagctcatcatcccccaggtgccactcttcaacatcctggcc
aaattcaacggcatcactgagaaggagtacaagacttacaaggagaacttcctgaagcgc
ttccagcttactaagctgcctccatatctaatcttttgtatcaagagattcactaagaac
aacttcttcgtggagaagaatccaaccatcgtcaacttccctattacaaatgtggatctg
agagaatacttgtctgaggaagtgcaagcagtccacaagaacaccacctacgacctcatc
gccaacatcgtgcacgatggcaagccctccgagggctcctaccgcatccacgtgctccac
cacggcactggcaaatggtatgaattgcaagacctccaagtgacagacatcttgccccag
atgatcacactgtcggaggcctacattcagatttggaagaggagggataatgatgacgtc
aaccagcagggggcgtga
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