Cavia porcellus (domestic guinea pig): 100728587
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Entry
100728587 CDS
T07777
Symbol
Elp1
Name
(RefSeq) elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpoc03016
]
100728587 (Elp1)
Transfer RNA biogenesis [BR:
cpoc03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
100728587 (Elp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
TPR_GEMI5
Beta-prop_WDR35_TULP_N
Beta-prop_NUP159_NUP214
DUF5462
Motif
Other DBs
NCBI-GeneID:
100728587
NCBI-ProteinID:
XP_003463826
Ensembl:
ENSCPOG00000005907
UniProt:
H0V6K7
LinkDB
All DBs
Position
Unknown
AA seq
1332 aa
AA seq
DB search
MRNLKLIQTLEFKDIQAPGKPQCFCLRTEQDTVLIGSECGLIEVNPVTREVKNEISLVAE
GFLPEDGSGCIVGVQDLVDQDSVCVATASGDVILCNLKTHQLECVGSVASGISVMSWSPD
QELVLLATGQQTLIMMTRDFEPVMEQPVHQGDFGESKFVTVGWGKKETQFHGSEGRQAAF
QMQTHESALPWDDHRPRVTWRGDGQFFAVSVVCPETGARKVRVWNREFALHSTSEPVAGL
GPALAWKPSGSLIASTQDKPNQQDVVFFEKNGLLHGHFMLPFFKDEMKVIDLFWNADSSV
LAVWLEDLEREENPALKSYVQLWTVGNYHWYLKQSLPFSTCLKSKIVSLMWDPVIPYRLH
VLRQGWHYLCYDWRWTTDRSSGDNSSDLANVAVIDGYKVLVTVFRQTVIPPPMCTYYLLL
PHPVNQVTFSAHSKKSNDLAVLDANNQVYVYKCGGSPSVDPTVKLGAVGGNGFKVPLRTP
HLDKKYTIQFENAEDQEVNPLKLTLLTWIEEDSFLAVSHSQSSPQSTVHSLTVSPSESDE
EQGQLTISSSVTVDGIIISLCYSSETESVALQLADGQILKCLWESSSLTVEPWKSPGGFP
VQFPYPCTQIELAVIGGEEYVLGLTDRCRFFISDTEVASNITSFILYDEFLLLTTHSHTC
QCFSLRDTSFKTLQAGLCSSHVANGEVLRKVERGSRIVTVVPQDTKLILQMPRGNLEVVH
HRALVLAQIRKWLDKLMFKEAFECMRKLRINLNLIHDHNPKVFLENVETFIRQIDSVNHI
NLFFTELKEEDVTKTMYPPPVTSSAQLSTDPAGKKLDLICDAMRTAMESINPHKYCLSIL
TSHVKKTTPELEIVLQKVHELQENDPSVPDAVSAEEALKYLLLLVDVNELYDHSLGTYDF
DLVIMVAEKSQKDPKEYLPFLNMLKKMETNYQRFTIDKHLKRYEKAISHLSKCGPEYFPE
CLNLIKDKSLYKEALKLYPSNSQQYKAICLAYGEHLTQEHQHETAGLVFARCGAYKEALS
AFLACGSWQQALCMATQLHLPKNQLIELSRTLAGKLAEQRKHREAAIVLEQYAQDYEEAV
LLLLEGAAWEEALRLVYKYNRLDIIETNIKPSILEAQKNYMAFLDSQTTTFSRHKKRLLV
VRELKEQAQPVNLDDEVPHGQESDLFSETSSIVNGSEMSGRYSHSNSRISARSSKNRRKA
ERKKHSLKEGSPLEDLALLEALNEVVQSTEKLKDEIHCILKTLFLFGFDEQGRELQEAFE
GTLQLMETSLPEIWTLTYQHNSAISGLGPNSTANSIMASYQQQKTSVPVIDAELFIPPKM
DGRTQWKLSLLE
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatttaaagttgattcagactctggagttcaaggatattcaagcaccagggaaa
ccccagtgcttctgtctccgaactgaacaggatacagtccttattggttcagaatgtgga
ttgatagaagtaaatcctgtcacacgagaagtgaaaaatgaaatttctctggtggcagaa
ggctttcttccagaggatggaagtggctgcatcgttggtgttcaggacttggtagatcaa
gattctgtgtgtgtggccacggcctctggagatgtcattctatgtaatctgaagacacac
cagctggaatgtgttggaagtgtggccagtggcatctctgtcatgagctggagtcctgac
caagagcttgtgcttcttgccacaggtcagcagaccctgattatgatgacaagagacttt
gaaccagtcatggagcagccagtccaccagggtgattttggtgaaagtaagtttgtcact
gttggatggggcaagaaggagacacagttccatggatcagaaggcaggcaagcagccttc
cagatgcaaacgcatgagtctgctttgccctgggatgatcacagaccacgagttacctgg
cgtggcgatggacagttttttgctgtgagtgtcgtttgtccagaaacaggagctcggaag
gtcagagtatggaaccgggagtttgctttgcattcgaccagtgagcctgtggcaggactg
ggaccagccctggcctggaaaccctcaggcagtttgattgcctctacacaagataaaccc
aatcagcaggatgttgtgttttttgagaaaaatggacttcttcatggtcactttatgctt
ccattcttcaaggatgagatgaaggtcattgacttgttctggaatgcagattcctctgtg
cttgctgtttggctggaagaccttgagagggaagaaaatcctgctctgaaaagctatgtt
cagctctggactgttggaaattatcactggtatctcaaacaaagtctgcccttcagtacc
tgtttgaagagtaagattgtatctctgatgtgggacccagtgatcccataccggctgcat
gttctccgtcagggctggcattacctctgctatgactggcgctggacgactgaccggagc
tcaggagataattccagtgacttggcaaatgtggctgtcattgatggatataaggtgttg
gtgacagtcttccggcagactgtgattccgcctcccatgtgcacatactacttgctgctt
ccacatccagtgaatcaagtcacattctctgcacactctaaaaaaagtaacgaccttgct
gtcctagatgccaataaccaggtttatgtgtataaatgcggaggtagtccaagtgtggat
cccacagtgaaactgggagctgtgggtgggaatggatttaaagttcctcttagaacacct
catctggacaagaaatacacaattcaatttgagaatgctgaggatcaagaagtaaaccca
ctgaagctcacccttctcacctggattgaagaagacagtttcctggctgtaagccacagt
cagtccagcccacagtctactgtccactctttgactgtgtccccttctgagtcggatgaa
gaacaaggacagctcaccatcagctcatcggtgacagtggatgggattataatcagtctg
tgttacagttccgagactgagtcagtagcactgcagctggcggatggccagatacttaag
tgcctttgggagtcatcttctttgactgttgaaccatggaagagccctggaggatttcct
gttcaattcccttatccatgcacacagattgaattggctgtgattggaggagaggaatat
gtccttggtctgactgatagatgtcgctttttcatcagtgacactgaggttgcatcaaat
atcacatctttcatactatatgatgaatttttgttgttgacaacccattctcatacctgc
cagtgtttttccctgagagatacttcatttaaaacattgcaggcaggtctgtgcagcagt
catgtggctaatggggaggttctgcggaaggtggagagaggttcacggattgtcacagtt
gtgccccaggacacaaagcttattttacagatgccaagggggaatttagaagttgttcat
catcgagccctagttttagcccagattcggaagtggttggacaagctgatgtttaaagaa
gcatttgaatgcatgagaaaactgagaattaatctcaatttgattcatgaccataaccct
aaggtgtttcttgaaaatgtggaaaccttcattagacagatagattctgtaaatcatatt
aatttatttttcacagagttgaaggaagaagatgtcacaaagaccatgtaccctcctcca
gttaccagcagtgcccagctgtccacagatcctgccgggaaaaaacttgaccttatttgt
gatgcaatgagaacagccatggagagcatcaaccctcacaagtactgcctatcaatactc
acatctcatgtgaagaaaactaccccagaactggaaatcgtgctgcagaaggtacatgag
cttcaagagaatgatccatctgttcctgatgctgtgagtgcagaagaggccttgaagtat
ctgctccttctggtagatgttaatgaattatatgatcattctcttgggacctatgacttt
gatttggtcatcatggtagctgaaaagtcacagaaggatcccaaagaatatcttccattt
cttaatatgcttaagaaaatggaaactaattaccagaggttcactatagacaaacacttg
aaacgatatgaaaaagccatcagtcacctcagcaagtgtggacctgaatattttccagaa
tgcttaaatttaataaaagataagagcttgtataaggaagctctgaagttatatccatca
aactcacagcagtacaaggctatctgtcttgcttatggggagcacctgacccaagagcac
cagcatgagacagcggggcttgtgtttgcccgttgtggtgcctataaggaagctctctcc
gcctttctggcttgtggcagttggcaacaagccctctgcatggcaacccagcttcacttg
cccaagaaccagctgattgagctaagtaggactctggcaggaaagctagctgaacagaga
aagcaccgtgaggcagccatcgttctggagcagtatgcccaggattatgaagaagctgtg
ctcttgctgttagagggagctgcctgggaagaagctctcagactggtatacaaatataac
agactggacatcatagaaaccaacataaaaccttccattttagaagctcagaaaaattac
atggcatttttggattctcaaactactacattcagtcgccataaaaagcgcttgctggtg
gttcgtgagctaaaggagcaagcacagccggtgaatctggatgatgaagtgccccatggc
caagagtcagacctcttctctgaaactagcagtattgtgaatggcagtgaaatgagtggc
agatactcccatagtaactccaggatatcagcgagatcttctaagaaccgccgcaaagca
gagcgaaagaaacatagcctcaaagaagggagtccattggaggacctggcccttttggag
gcattaaatgaagtggtacaaagcacggaaaaactgaaagatgaaatacactgtatttta
aagacactctttctctttggatttgatgagcaaggaagggaattacaggaggcctttgag
ggtactttgcagctgatggaaacatcacttccggaaatttggactcttacctaccagcac
aattcagccatatctggccttggtcccaattctactgcaaatagtatcatggcttcttat
caacagcagaagacttcagttcctgttattgatgctgagcttttcataccaccaaagatg
gatggaagaacacagtggaaactgagcctgctagagtga
DBGET
integrated database retrieval system