Cavia porcellus (domestic guinea pig): 100728700
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Entry
100728700 CDS
T07777
Symbol
Ighmbp2
Name
(RefSeq) DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpoc03009
]
100728700 (Ighmbp2)
03012 Translation factors [BR:
cpoc03012
]
100728700 (Ighmbp2)
Enzymes [BR:
cpoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
100728700 (Ighmbp2)
5.6.2.5 RNA 5'-3' helicase
100728700 (Ighmbp2)
Ribosome biogenesis [BR:
cpoc03009
]
Eukaryotic type
Other ribosome biogenesis factors
100728700 (Ighmbp2)
Translation factors [BR:
cpoc03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
100728700 (Ighmbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
AAA_30
R3H
AAA_19
zf-AN1
Viral_helicase1
ResIII
AAA_16
DEAD
nSTAND3
AAA_22
UvrD-helicase
Helicase_RecD
IstB_IS21
Flavi_DEAD
AAA_25
AAA
NTPase_1
SLFN-g3_helicase
PhoH
Zot
ABC_tran
NPHP3_N
DnaB_C
UvrD_C_2
ATPase
DAP3
AAA_7
Motif
Other DBs
NCBI-GeneID:
100728700
NCBI-ProteinID:
XP_003468365
Ensembl:
ENSCPOG00000007063
UniProt:
H0V991
LinkDB
All DBs
Position
Unknown
AA seq
1051 aa
AA seq
DB search
MLRLQAHTSRPKVPHRAEDAAAAAIFPNRKRKQHEPCASASRTDGSAGAPGTLVRQTHGS
AAGMASAAVETFVAKHLYLLELERDAEVEERRSWQENISLKELQSRGVCLLKLQVSSQRT
GLYGRLLVTFEPRRCGPVAVLPSNSFTSGDIVGLYDTANEGRQLATGILTRITQKSVSVA
FDESHDFQLTLDRENFYRLLKLANDVTYKRLKKALVTLKKYHSGPASSLIEVLFGGSDPS
PAQEIPPLKFYNTALDASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEVILQAVKQGLK
VLCCAPSNVAVDNLVERLALRKLRILRLGHPARLLEPIQQHSLDAVLARSDSAQIVADIR
KDIDQIFVKNKKTQEKKDKSNFRSEIKQLRKELKEREEAAMVESLTAASVVLATNTGASP
DGPLKLLPESYFDVVVIDECGQALEASCWIPLLKARKCILAGDHKQLPPTTVSHQAAQEG
LSLSLMERLAEEHGDKVVRTLTVQYRMHQAIMHWASEAMYGGQLTAHSSVAGQLLRDLPG
VTATEETGIPLLLVDTASCGLFELEEEDDQSKGNPGEVRLVSLHIQALVDAGVQASDIAV
ITPYNLQVDLLRQSLEHKHPELEIKSVDGFQGREKEAVVLSFVRSNRKGEVGFLAEDRRI
NVAVTRARRHVALVCDSRTVNNHPFLKTLVDYVTQHGEVRTAFEYLDDIVPVNYAHEGPQ
GHSQAAAKPRGPTSSARKLPRSGRPEGGQEAGAAARQHQKKPGTKPLASEVPSQPRFNGD
SQEGPRVADGTERFRAMIEEFVASEEMQLRFPASLNSHDRLRVHQIAEEYGLRHDSAGEG
KARCITVSKRGHGVSSRAPLPAVASSPGQPERPPEEQCTQAGVDLKVLHLERLQRVQGTQ
EQPAKKEQPVLGSGLQKFPEKKKKKEAKGRPARDQPTEEDFDALVSAAVKADNTCSFAKC
SASVVTLGQFCQFCGHRYCLSHHLPEVHGCGEKARVHARQRISREGVLYAGSGTKDRSLD
PAKRAQLQRRLDKKLGELSSQRASKRKEKGT
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggctgcaagcacacaccagccgccccaaggtgccccatagggccgaggatgct
gcggccgccgccatcttcccgaaccggaagcggaagcaacacgaaccttgtgcgtcggcg
tcgcgtaccgacgggagcgcgggagcaccgggaacactggtccgccagacacacggctct
gcagctgggatggcttcggctgctgtggagaccttcgtggccaagcacttgtacctgctg
gaactcgagagggacgcggaggtggaggagcgcaggtcctggcaggagaacatctctctg
aaggagctgcagagccggggcgtgtgtttgctgaagctgcaagtgtccagccagcgcacg
gggctgtacggacggctgctggtcaccttcgagcccaggagatgtgggcctgtggcagtg
cttcccagcaacagcttcacttccggtgatatcgtgggtctgtatgacactgctaacgaa
ggcaggcagctggccactgggatcctgacccgcatcacccagaaatccgtctcagtggcc
tttgatgagtcccatgacttccagttgacattggaccgggagaacttctacagactctta
aagcttgccaatgacgttacttacaagcgcctgaagaaagccctggttaccctgaagaag
taccattcggggcccgcgtcctcgctcatcgaggtcctcttcggtggatctgaccccagc
cctgcccaggaaatacccccactaaagttctacaacactgccttggatgcctctcagaaa
gaagcagtttcctttgccctgtcccagaaagaactcgccatcatccatggacctcctggc
actgggaaaaccacgaccgtggtggaagttattctgcaagctgtgaagcaaggcttaaag
gttctgtgctgcgctccctctaacgttgccgtggacaatctggtggagcggctggctctg
cgcaagctgcggattctgcgccttggccaccctgcccgcctcctggaacccattcagcag
cattccctggatgcagttttagctcgaagtgacagcgcccagattgtcgcagacatcaga
aaggacatcgatcagatctttgtgaaaaacaaaaagacccaggagaagaaggataaaagt
aactttcgcagtgaaatcaagcagttgagaaaagagctcaaggagagagaagaggcagcc
atggtggaaagcctcaccgcggccagcgtggtcctcgcaacaaacacaggtgcttctcct
gacggccctctcaagttgcttcctgagagctacttcgacgtggtggtcattgatgagtgt
ggccaggccctggaagccagctgctggatccccctgctgaaggccaggaagtgcatcctg
gctggagaccacaagcagctgccgcccaccacagtctcgcaccaggcggcgcaggagggg
ctgtcactcagcctgatggagcgccttgctgaggagcacggtgacaaggtggtgcggacg
ctgaccgtgcagtaccgtatgcaccaggccatcatgcactgggcctcggaggccatgtat
ggcggtcagctcacagcccattcctcggtggcggggcagctcctgagggacctgccaggt
gtaactgctacagaggagacgggcatccccctgctgctcgtggacaccgccagctgtggg
ctgttcgagctggaggaagaggatgaccagtccaagggaaacccgggtgaagtccgcctt
gtcagtctgcacatccaggctctggtggatgctggtgtccaagcaagtgacattgctgtc
atcacgccctacaatctccaggtggacctgcttagacagagcctcgagcacaagcaccct
gagctggagattaagtctgttgatggcttccagggccgcgagaaggaggctgtggtgttg
tccttcgtcaggtcgaacaggaagggtgaggttggttttctggccgaggaccggcggatc
aatgttgctgtcacccgagcacggcgccatgtggcactcgtttgtgattcccgcactgtc
aacaaccacccctttttgaagaccctggtggactatgtcacccagcatggggaagtgcgc
acagcctttgagtatcttgatgatattgtccctgtaaactatgctcatgagggcccacag
ggccacagccaggctgctgcaaagcctcgaggccccacttcctcggccaggaagctgccc
agaagtggacggccagagggtggccaggaggctggagcagctgccaggcagcaccagaag
aagccaggcacgaagcctttggcctctgaagtcccttcccaaccccgattcaatggggac
agccaggagggcccgagagttgcagatggcacagagcgcttcagggccatgatcgaggag
tttgtggccagtgaggagatgcagttgcggtttcctgcgtccttgaattctcacgacagg
cttcgggtccaccagatagccgaggagtacgggctgcggcatgacagtgctggggagggc
aaggcgaggtgcattactgtgagcaagaggggccacggggtcagcagcagagctcccctc
cccgctgtggcctccagccctgggcagccagagcggccccctgaggagcagtgcacccag
gctggggtggacctgaaggtactgcacctagagaggctgcagagggtgcagggcacccag
gaacagccagccaagaaggagcagccagtcctgggctcagggctgcagaagtttccagaa
aagaaaaagaaaaaagaagccaagggccgccccgccagggatcaacctactgaggaggac
ttcgatgccttagtgtcagctgccgtgaaggccgacaacacctgcagctttgccaaatgt
tcagccagtgtcgtgactttgggacagttctgccagttctgtggccaccgctactgcctc
agccaccacctccccgaggtccacggctgcggtgagaaggctcgagtccatgcccggcag
agaatcagccgggagggggtcctctatgctggcagcgggaccaaggacaggtctctggac
cctgccaagagggcccagctccagaggaggctggacaagaagctgggggagctcagcagc
cagagggcgagcaagaggaaggagaaggggacatga
DBGET
integrated database retrieval system
