Cavia porcellus (domestic guinea pig): 100728997
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Entry
100728997 CDS
T07777
Symbol
Gemin5
Name
(RefSeq) gem-associated protein 5 isoform X1
KO
K13133
gem associated protein 5
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoc03019
]
100728997 (Gemin5)
03041 Spliceosome [BR:
cpoc03041
]
100728997 (Gemin5)
Messenger RNA biogenesis [BR:
cpoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100728997 (Gemin5)
mRNA cycle factors
P-body specific factors
100728997 (Gemin5)
Spliceosome [BR:
cpoc03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
100728997 (Gemin5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GEMI5_RBS
TPR_GEMI5
Beta-prop_IFT122_1st
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_WDR5
Beta-prop_EML_2
WD40_Prp19
WD40
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
DSE1_N
Beta-prop_WDR3_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_Aladin
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
WD40_Gbeta
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_NOL10_N
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_EIPR1
PAC11
NBCH_WD40
ASA1
Beta-prop_WDR35_TULP_N
MIOS_WD40
Beta-prop_VPS8
Beta-prop_WDR41
CFAP251_N
WD40_MABP1-WDR62_1st
Beta-prop_ACSF4
DNAI3_WD
WD_LRWD1
AATF-Che1
Beta-prop_SCAP
TPR_IF140-IFT172
2-oxoacid_dh
Motif
Other DBs
NCBI-GeneID:
100728997
NCBI-ProteinID:
XP_013011627
Ensembl:
ENSCPOG00000003468
LinkDB
All DBs
Position
Unknown
AA seq
1510 aa
AA seq
DB search
MGPEPQTLPPSPNWYCTRCSDAVPGGLFGFAARTSVFLVRVGPGAGATAGTPPFRVIGEL
VGHTERVSGFTFSHHPGQYNLCATSSDDGTVKIWDVETKTVVTEHALHQHTIAALHWSPR
VKDLIVSGDEKGVVFCYWINRNDSQRLFVEPRTIFCLTCSPHHEDLVAIGYKDGIVVIID
ISKKGEVIHRLRGHDDEIHSIVWCPLPGEDCLSVNQEENSEEPEIPNEKVTPPTTEAKGC
YLATGSKDQTVRIWSCARGRGVMTLKIPFLKRRGGGVDPTVKERLWLTLYWPKNQPTQLV
SSCFGGELLLWDLTQSWRRKYTLFSASEGQNHSRIVFNLCPLQTEDEKQLLLSTSMDRDV
KCWDMTTLECCWTLPSLGGFAYSLAFSPEDTGYLAVGVGDGMIRVWNTASQKNNYDVKNF
WQGVKSKVTALCWHPKKEHCLAFGTDDGKVGLYDTYSNKPPQISSTYHKKTVYTLAWGPP
VPPMSLEGEGDRPSFTLYSCGGEGIVLQHHPWRFSGEAFDINKLIRDTNAVKYKLPVHTD
ISWKADGKFMALGNEDGSIEIFQVPNLKLMCTIQQHHKLLNTMSWHHEHGSQPELSYLLA
SGSNNAVIYVHNLKTVLESSSESPVTITEPFRTLSGHTAKITCLAWSPHHDGILVSASYD
GTAQVWDTLREQPLHNFRGHRGRLLCVVWSPLEPECIYSGADDFCVYRWLPSAQDHSRPP
QGKKGIELEKKRLSQPKPKPKKKKKPTSQVPVKQESFEGNEEENTKENAVPVENGVSDPE
CEEEAQELEMPCELTPVEPVVYTQISSSCEKSKAIINNNKITVLKKEPPKEKPEALMKKR
KARSMLPLSTSLDHRSKEELHHDCLVLATAKHATELNKDLSADLEDRFHLGLFTDRDTLY
RMIETEGKGHLENGHPELFHQLMLWKGDLQGVLQTAAERGELTDNLVAMAPVAGYHVWLW
AVEAFAKQLCFQDQYVKAASHLLSIHKVYEAVELLKSHHFYREAIAVAKARLRPEDPVLK
DLYLSWGAILERDGHYAVAAKCYLGATSPFDAAKVLAKKGDAASLRTAAELAAITGENEL
SVLLALRCAQELLLTKNWVGAQEALQLHGSLQGQRLVFCLLELLCRHLEEKQLPEARYTP
SHHTWAMDSEGPFVQRVTSVWKRVFGLDSPLQCRAALQKLQDIKYPSATNNTPSHQLLLH
ICHDLTLAVLSQQVASWDEAVQALLRAVVRSYDSGSFTVMQGVCSAFLPDGCDHLRDKLG
DHESLAAPAFRSLEAFFMYGRLYEIWWSVSGPCSKPSVWVRAAHGNTVPTARSQQENGAS
TEETGSEAACLPEPGSPPGLSIGLSRESEHVLSACQKLLSETHASLQNAQRTVAQVQESL
AEMIQQHRKSLLSKPMASALRNNEPDQETEAPPSEAQSQCNSKEEEENEPVSLPELTRRL
TEANQRMAKFPESIKTWPFPDVLECCLVLLHIGAQCPGCITEELQQQARELLRKYGNTKA
HKRQRRTFCT
NT seq
4533 nt
NT seq
+upstream
nt +downstream
nt
atggggccggagccgcagacgctgccaccctccccgaactggtactgcacccgctgcagc
gatgccgtgccgggcggcctcttcggcttcgcagcgcggacctctgtcttcctggtccgc
gtgggcccgggcgcgggcgcgaccgctgggacgcccccgtttcgagtcataggagagttg
gtgggacacactgaaagggtctctggcttcacattttcgcatcaccctgggcagtacaat
ctctgtgccacaagctccgatgacgggactgtgaaaatatgggatgtagagacaaaaaca
gttgtgacggaacatgcgctccatcagcacacaatagcagcattacattggtctcctcgt
gtaaaggacttaattgtatctggagatgaaaaaggagtcgttttctgctattggattaac
agaaatgacagccagcgcctcttcgtagaacccaggacaattttctgtcttacttgttca
cctcaccatgaagacttggtagccattggctacaaggatggcatagtggttataattgac
atcagtaagaaaggagaagttattcacaggcttcgaggacatgatgatgaaatccactcc
atagtctggtgccccctgcctggtgaagattgtttatccgtaaatcaagaagaaaactca
gaagaacctgaaattcccaatgagaaagttaccccaccaactacagaagcaaagggctgc
tacttagccactggaagcaaagatcagaccgttcgaatctggagctgcgccaggggtcga
ggagtgatgactttgaaaatccccttcctgaagagaagaggagggggtgtggacccaacg
gttaaagagcgcctttggttgacactgtactggcccaagaatcagccgacacagctggtg
tccagttgctttggaggtgaactgctgctatgggatctcacccagtcctggagacggaaa
tacaccctctttagcgcttcagaagggcagaatcactccagaattgtctttaatttgtgt
cctttgcaaactgaggatgagaagcagctgctcctgtccacatcaatggatagagatgta
aaatgttgggacatgaccacgctcgagtgctgctggaccctgccttcccttggtgggttt
gcatacagcctggccttctctcctgaggatacgggctatttggctgtcggtgttggggat
ggcatgatccgggtgtggaatacagcatctcagaagaacaactatgatgtgaaaaatttt
tggcaaggagtcaagtccaaggttacagcgctatgctggcacccaaagaaggaacactgc
ttagctttcggaactgatgacggaaaagtgggactgtacgacacctactccaacaaacct
ccacagatttcaagcacatatcataagaagactgtgtacacactagcttgggggccacca
gtaccccccatgtcactcgaaggagaaggagacagaccttccttcactctatacagctgt
ggaggggaaggcattgtcctccagcaccatccctggaggttcagtggcgaggccttcgac
atcaacaaactcatacgggacaccaatgcggtcaagtacaaactgcctgtgcacacagac
atcagctggaaagcagatggcaaattcatggctcttggcaatgaagacggatcaatagag
atatttcaggttcccaacctgaaactgatgtgcaccatccagcaacatcacaagcttctg
aacaccatgagctggcaccacgagcacggcagccagccagagctgagctatctcctggcc
tctggctccaacaatgcggtcatctacgtgcacaacctgaaaactgtgctagagagcagt
tctgagtctccagtgaccatcactgagcccttccgcacgctctcaggacatactgccaag
atcacctgcctggcatggagcccgcatcacgatggaatcctggtgtctgcatcctatgat
gggacagcccaggtgtgggacaccctccgtgagcagcctctgcacaatttccgaggacac
cgaggccggctgctgtgtgtggtgtggtccccgttggaaccagagtgcatctactcggga
gcagatgacttctgcgtgtacagatggctaccttctgcacaggatcactcccggcctccc
caaggcaaaaaaggtattgaattagagaaaaaacggctctctcaacccaagccaaagccc
aaaaagaagaaaaagcctacttcacaagttcctgtcaaacaagagtcgtttgagggaaat
gaagaggagaacacaaaggagaatgcggtgcccgtggagaacggggtgtcagacccagag
tgtgaggaggaggcgcaggagctggagatgccctgtgagctcacccccgtggaaccagtt
gtctacactcagatttcatcaagctgtgaaaaatcaaaagcgattattaacaacaataaa
atcactgtactgaaaaaggagccacctaaagagaagccagaagccttaatgaagaagaga
aaagctcgctccatgctccctctgagtacaagcctggaccacaggtccaaagaggagctc
catcatgactgcttggttctagcaactgcaaaacacgccacagagttaaataaggacttg
tctgctgatcttgaagacagatttcacttggggctcttcacggacagggacaccctctac
aggatgatcgagacggaaggaaaaggtcatctagaaaatggccacccagagttattccac
cagctcatgctttggaaaggagacctgcaaggtgttctgcagaccgcagctgaaagaggg
gagctgacagacaatcttgtggcgatggccccagtcgctggctaccacgtgtggctgtgg
gccgtggaagcctttgccaaacagctgtgtttccaggaccagtatgtcaaggctgcctct
cacctgctttccatccataaggtgtacgaagctgtggagctgctgaagtcgcaccatttc
tacagagaagctattgctgttgccaaggcccggctgcgcccagaggaccctgtgctgaag
gacctgtacctcagctggggagccatcctggaaagagatggccactatgctgtggcagcc
aaatgctatttaggggccacttctccttttgatgcagccaaggttttggccaaaaagggg
gacgcagcgtcactcagaacagctgcggagctggctgcgatcacaggagagaacgagttg
tctgttcttctggctctcagatgcgcccaggagctgcttctgaccaagaactgggtggga
gcccaggaagcactgcagctgcacggaagtctccaggggcagagactggtgttttgcctc
cttgagctactgtgccggcatctggaggagaagcagcttccagaagccagatacaccccc
tctcaccacacctgggccatggacagcgaagggcccttcgtgcagcgagtgacctcagtg
tggaagagagtctttggactggacagcccactgcagtgtcgggcagccttgcagaaactg
caagacattaaatacccgtctgctacaaacaacactccctcccatcagctcctgcttcac
atttgtcacgacctcaccttggcggtgctgagccagcaggtggcctcctgggatgaagcc
gtgcaggcgctgctgcgggctgtggtgcggagctatgattcaggcagcttcaccgtcatg
caaggcgtgtgctcggcgttcctccctgacggctgtgaccacctaagagacaaactgggt
gaccatgagtccttggctgcaccagccttcagaagtctggaggcatttttcatgtacggg
cgcctgtatgagatctggtggtctgtctctgggccttgctccaagcccagtgtctgggtc
agggctgcccatggaaacacagtgcccactgcacgcagccagcaggagaacggggccagc
acagaggagacgggctccgaagctgcttgcctgccagagccaggcagtcccccgggtctc
agcataggactctcaagagagagtgagcacgtgctgagcgcgtgccagaagctcctatcc
gagacgcatgccagccttcagaacgcacagaggactgtggctcaagtccaggagtctctg
gcagaaatgatccagcagcaccgaaagagcctgctctctaaacctatggccagtgctctg
aggaacaacgaacctgaccaggaaacagaagcgcccccttccgaggctcagagccagtgt
aatagtaaagaagaagaagaaaatgagccagtttctctgcctgaattaaccagaaggctt
acagaggcaaatcaaagaatggctaagtttcccgaaagtatcaagacctggcccttccca
gatgtgctggaatgctgcctcgtcctgcttcacatcggggcccagtgtcccggctgcata
actgaagagctgcaacagcaggcccgagagctcctcaggaaatatggcaacactaaagcg
cacaaaaggcagcgcaggaccttctgcacgtga
DBGET
integrated database retrieval system
