Cavia porcellus (domestic guinea pig): 100729022
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Entry
100729022 CDS
T07777
Symbol
Slx1a
Name
(RefSeq) structure-specific endonuclease subunit SLX1 isoform X1
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
100729022 (Slx1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpoc03400
]
100729022 (Slx1a)
DNA repair and recombination proteins [BR:
cpoc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
100729022 (Slx1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
FANCL_C
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
100729022
NCBI-ProteinID:
XP_003477892
Ensembl:
ENSCPOG00000025948
UniProt:
H0WBE5
LinkDB
All DBs
Position
Unknown
AA seq
266 aa
AA seq
DB search
MGPAEGAARPGRFFGVYLLYCLNPRNRGRVYVGFTVNPARRVQQHNGGRKKGGAWRTSGR
GPWEMVLVVHGFPSAVAALRFEWAWQHPSASRRLVHVGRRVRSETSFAFHLRVLAAMLRS
PPWVRLPLTLRWLCPDFCRDLCPPPPPHVPLAFGPPPIPQALKDCTQARDQGAGDQCTLC
ACALQDEEGPLRCPHPSCSLQAHVICLAEEFLQAEPGQLVPLEGQCPRCKNSLLWGDLIS
LCRMGSEKDNDDSDLEEGHWTDLLET
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgggccccgcagagggggcagcgaggccggggcgcttctttggcgtctacctgctctac
tgcctgaaccctcggaatcggggccgtgtgtacgtggggttcacggtcaaccctgctcgt
agggtgcagcagcacaacggaggccgcaaaaaaggcggggcctggcggacaagtgggaga
gggccctgggaaatggtgctcgtcgtgcatgggttcccgtctgccgttgcggcgctccgg
ttcgagtgggcctggcagcacccaagcgcctcgcgtcgcctggtgcacgtggggcggcgc
gtgcgcagcgagacctccttcgccttccacctgcgcgtgctagcggccatgctgcgctcg
ccgccctgggtacggctgccgctcaccctgcggtggctgtgcccggacttctgccgtgac
ctctgcccgccaccacctccgcatgtgccgctggcctttgggccacctcccataccccag
gccttgaaggactgcacgcaggcgagagaccagggcgcgggtgaccagtgcactctgtgc
gcctgcgcactacaagatgaagagggccctctgcgttgtccccatcccagctgttccctg
caggcccatgtgatctgcctggcagaggagttcctccaggcagagccagggcagcttgtg
cccctagaaggccagtgtcctaggtgtaagaattcgctgttgtggggagacttgatctca
ctatgtcggatgggatccgagaaagacaatgatgactcagatttagaagagggacactgg
acagacctgctggagacctga
DBGET
integrated database retrieval system
