KEGG   Cavia porcellus (domestic guinea pig): 100729096
Entry
100729096         CDS       T07777                                 
Symbol
Rorb
Name
(RefSeq) nuclear receptor ROR-beta
  KO
K08533  RAR-related orphan receptor beta
Organism
cpoc  Cavia porcellus (domestic guinea pig)
Pathway
cpoc04710  Circadian rhythm
Brite
KEGG Orthology (KO) [BR:cpoc00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    100729096 (Rorb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cpoc03000]
    100729096 (Rorb)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:cpoc03310]
    100729096 (Rorb)
Transcription factors [BR:cpoc03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    100729096 (Rorb)
Nuclear receptors [BR:cpoc03310]
 1. Thyroid hormone like
  1F. RAR-related orphan receptor
   100729096 (Rorb)
SSDB
Motif
Pfam: zf-C4 Hormone_recep
Other DBs
NCBI-GeneID: 100729096
NCBI-ProteinID: XP_013010463
Ensembl: ENSCPOG00000010612
LinkDB
Position
Unknown
AA seq 459 aa
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQQQSGDAEALAR
VYSTSISNGLSNLGSETSGTYTNGHVIDLPKSEGYYSVDSGQPSPDQSGLDMTGIKQIKQ
EPIYDLSSVPNLFTYSSFNNGQLAPGITMSEIDRIAQNIIKSHLETCQYTMEELHQLAWQ
THTYEEIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCL
EVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIA
LFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKLIAKIPTITAVC
NLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPDCATVCK
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgcgagcacaaattgaagtgataccatgcaaaatttgtggcgataaatcctccgggatc
cactacggcgtcatcacgtgtgaaggctgcaaggggttctttaggaggagtcagcagaac
aatgcctcttactcctgccctaggcagagaaactgtttgattgacaggaccaaccgaaac
cgttgccaacactgccgcctgcagaagtgtcttgccctagggatgtcaagagatgctgtg
aagtttggaaggatgtccaagaagcaaagggacagcctgtacgccgaggtgcagaagcac
cagcagcgactgcaggagcagaggcagcagcagagcggggacgcagaggccctggccagg
gtctacagcaccagcatcagcaacggcctgagcaacctgggcagcgagaccagcggcact
tataccaacgggcacgtcatcgacctgcccaagtctgagggctactacagcgtggattct
ggccagccgtccccggatcagtcgggacttgacatgactgggatcaaacagataaagcaa
gaacccatctatgacctcagctcggtaccaaacttgtttacctatagctctttcaacaac
gggcagctagcaccgggcataaccatgagcgagatcgaccggattgcacagaacatcatt
aagtctcatttggagacatgtcagtacaccatggaagagctgcaccagctggcatggcag
acccacacctatgaagaaatcaaggcgtatcagagcaagtccagggaagcactttggcag
cagtgcgccatccagatcacacacgccatccagtacgtggtggagttcgccaagcggatc
acaggcttcatggagctctgtcagaacgaccagatcctacttttgaagtcaggttgcttg
gaagtggttttggtgagaatgtgccgtgccttcaacccattaaacaacactgttctgttt
gaaggaaaatacggagggatgcagatgttcaaggccttaggttctgatgacctcgtgaat
gaagcatttgactttgcaaagaatttgtgttccttgcagttgacagaggaggagatcgct
ttgttctcatctgctgttctgatttctccagaccgagcctggctgatagaaccaaggaag
gtccagaagcttcaggaaaaaatttattttgcacttcaacatgtgattcagaagaatcac
ctggatgatgagacattagcaaagttaatagccaagattccaaccatcacagctgtgtgc
aacttgcacggggagaagctgcaggtatttaagcagtctcatccagacatagtgaataca
ctctttcctccgttatacaaggagctctttaatcctgactgtgccaccgtgtgcaaatga

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