Cavia porcellus (domestic guinea pig): 100729096
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Entry
100729096 CDS
T07777
Symbol
Rorb
Name
(RefSeq) nuclear receptor ROR-beta
KO
K08533
RAR-related orphan receptor beta
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
100729096 (Rorb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpoc03000
]
100729096 (Rorb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cpoc03310
]
100729096 (Rorb)
Transcription factors [BR:
cpoc03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
100729096 (Rorb)
Nuclear receptors [BR:
cpoc03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
100729096 (Rorb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
100729096
NCBI-ProteinID:
XP_013010463
Ensembl:
ENSCPOG00000010612
LinkDB
All DBs
Position
Unknown
AA seq
459 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQQQSGDAEALAR
VYSTSISNGLSNLGSETSGTYTNGHVIDLPKSEGYYSVDSGQPSPDQSGLDMTGIKQIKQ
EPIYDLSSVPNLFTYSSFNNGQLAPGITMSEIDRIAQNIIKSHLETCQYTMEELHQLAWQ
THTYEEIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCL
EVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIA
LFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKLIAKIPTITAVC
NLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPDCATVCK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcacaaattgaagtgataccatgcaaaatttgtggcgataaatcctccgggatc
cactacggcgtcatcacgtgtgaaggctgcaaggggttctttaggaggagtcagcagaac
aatgcctcttactcctgccctaggcagagaaactgtttgattgacaggaccaaccgaaac
cgttgccaacactgccgcctgcagaagtgtcttgccctagggatgtcaagagatgctgtg
aagtttggaaggatgtccaagaagcaaagggacagcctgtacgccgaggtgcagaagcac
cagcagcgactgcaggagcagaggcagcagcagagcggggacgcagaggccctggccagg
gtctacagcaccagcatcagcaacggcctgagcaacctgggcagcgagaccagcggcact
tataccaacgggcacgtcatcgacctgcccaagtctgagggctactacagcgtggattct
ggccagccgtccccggatcagtcgggacttgacatgactgggatcaaacagataaagcaa
gaacccatctatgacctcagctcggtaccaaacttgtttacctatagctctttcaacaac
gggcagctagcaccgggcataaccatgagcgagatcgaccggattgcacagaacatcatt
aagtctcatttggagacatgtcagtacaccatggaagagctgcaccagctggcatggcag
acccacacctatgaagaaatcaaggcgtatcagagcaagtccagggaagcactttggcag
cagtgcgccatccagatcacacacgccatccagtacgtggtggagttcgccaagcggatc
acaggcttcatggagctctgtcagaacgaccagatcctacttttgaagtcaggttgcttg
gaagtggttttggtgagaatgtgccgtgccttcaacccattaaacaacactgttctgttt
gaaggaaaatacggagggatgcagatgttcaaggccttaggttctgatgacctcgtgaat
gaagcatttgactttgcaaagaatttgtgttccttgcagttgacagaggaggagatcgct
ttgttctcatctgctgttctgatttctccagaccgagcctggctgatagaaccaaggaag
gtccagaagcttcaggaaaaaatttattttgcacttcaacatgtgattcagaagaatcac
ctggatgatgagacattagcaaagttaatagccaagattccaaccatcacagctgtgtgc
aacttgcacggggagaagctgcaggtatttaagcagtctcatccagacatagtgaataca
ctctttcctccgttatacaaggagctctttaatcctgactgtgccaccgtgtgcaaatga
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integrated database retrieval system