Cavia porcellus (domestic guinea pig): 100729262
Help
Entry
100729262 CDS
T07777
Symbol
Med13
Name
(RefSeq) LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 13
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
100729262 (Med13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpoc03021
]
100729262 (Med13)
Transcription machinery [BR:
cpoc03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
100729262 (Med13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Motif
Other DBs
NCBI-GeneID:
100729262
NCBI-ProteinID:
XP_003469499
Ensembl:
ENSCPOG00000011674
LinkDB
All DBs
Position
Unknown
AA seq
2040 aa
AA seq
DB search
MNRNFVRIGKWFVKPYEKDEKPINKSEHLSCSFTFFLHGDSNVCTSVEINQHQPVYLLSE
EHITLAQQSNSPFQVILSPFGLNGTLTGQAFKMSDSATKKLIGEWKQFYPISCCLKEMSE
EKQEDMDWEDDSLAAVEVLVAGVRMIYPACFVLVPQSDIPTPSSVGSSHCSASCLGVHQV
PASTRDPAMSSVTLTPPTSPEEVQTVDPQSAQKWVKFSSVSDGFNSDSTSHHGGKIPQKL
ASHVVDRVWQECNLNRAQNKRKYSASSGGLTEEEIPDKVACWDFVEATQRTSCSCSRHKN
LKPRNSGQGQAPSLSQQQQVLPKHKTNEKQEKSEKPQKRPLTPFHHRISISDDVGMDADS
ASQRLVISAPDSQVRFSNLRTNDVAKTPQMHGTEMANSPQPPPLSPHPCDVADEGVTKTP
STPQSQHFYQMPTPDPLVPAKPMEDRIDSLSQSFPPQFQETVEPTVYIGTAVNLEEDETN
KAWKYYKVPKKKDVEFLPPQLPGDKFKDDPVGPFGQESVTSVTELMVQCKKPLKVSDELV
QQYQIKNQYISAVASDAEQEPKIDPYAFVEGDEEFLFPDKKDRQNSEREAGKKHKVEDGT
SSVTVLSHEEDAMSLFSSSVKQDAPRPSSHARPPSTSLIYDSDLAVSYTDLDNLFNSDED
ELTPGSKKSVTGSDDKANCKESKTGNLDPLSCISTADLHXMYPTPPSLXQHIMGFSPMNV
NNKDYGSMDTTPGGTVLEGNSSSIGAQFRIEVDEGFCSPKPSEIKDFSYVYKPENCQVLV
GCSMFAPLKSLPSQCLPPIKLPEDCVYRQSWTVGKLELLPSGSTMPFIKEGDGSNMDQEY
GPAYTPQTHTSFGMPPSSAPPSNSGAGILPSPSTPRFPTPRTPRTPRTPRGAGGPASAQG
SVKYENSDLYSPASTPSTCRPLNSVEPATIPSIPEAHSLYVNLILSESVMNLFKDCNFDS
CCICVCNMNIKGADVGVYIPDPTQEAQYRCTCGFSAVMNRKFGNNSGLFLEDELDIIGRN
TDFGKEAEKRFEALRATSAEHINGGLKESEKLPDELILLLQDQCTNLFSPFGVSDQDPFP
KIGVISNWVRVEERDCCNDCYLALEHGRQFMDNMSGGKVDEALVKNSCLHPWSKRNDVSM
QCSQDILRMLLSLQPVLQDAIQKKRTVRPWGVQGPLTWQQFHKMAGRGSYGTDESPEPLP
IPTFLLGYDYDFLVLSPFALPYWERLMLEPYGSQRDIAYVVLCPENEALLHGAKSFFRDL
TAIYESCRLGQHRPISRLLTDGIMRVGPTASKKLSEKIVAEWFSQAADGNNEAFSKLKLY
AQVCRYDLGPYLASQPLDSSLLSQPNLVTPTSQSLVTPPQMTNTGSANTPSATLVSTASS
TMTMTSGVAISSSVATTSSTLTTSSSSSSSNLNSGASSNKLPSFPPFGSMNSSVTGSMSA
QTSTVQGSQLGGQQSSALQTAGISGESSSLPTQPHPDVSESTMDRDKVGIPTDGDSHAIT
YPPAIVVYIIDPFTYEDKDESTNSSNVWTLGLLRCFLEMVQTLPPHIKSTVSVQIVPCQY
LLQPVKHEDRQIYTQHLKSLAFSAFTQCRRPLPTSTNVKTLTGFGPGLAMETALKSPDRP
ECIRLYTPPFILAPVKDKQTELGETFGEAGQKYNVLFVGYCLSHDQRWILASCTDLYGEL
LETCIINIDVPNRARRKKGSARRFGLQKLWEWCLGLVQMSSLPWRVVIGRLGRIGHGELK
DWSCLLSRRNLQSLSKRLKDMCRMCGISAADSPSILSACLVAMEPQGSFVIMPDSVSTGS
VFGRSTTLNMQTSQLNTPQDTSCTHILVFPTSASVQVASATYTTENLDLAFNPNNDGADG
MGIFDLLDTPDDLDPDIINILPASPTASPVHSPGSHYPHGGDTGKGQGTDRLLSTESHDE
VTNILQQPLALGYFVSTAKAGPLPDWFWSACPQAQYQCPLFLKASLHLHVPSVQSDELLH
SKHSHPLDSNQTSDVLRFVLEQYNALSWLTCDPAIQDRRSCLPIHFVVLNQLYNFIMNML
NT seq
6123 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgaaactttgtacgtattggcaagtggtttgtaaagccttatgaaaaagatgaa
aaacctataaataaaagtgaacacttgtcctgctctttcacctttttcttgcatggagac
agcaatgtttgtaccagtgtggaaattaatcagcatcaacctgtataccttctcagtgaa
gagcatattacccttgctcagcagtctaatagtccgtttcaggttatcttaagcccattt
ggactaaatggcactctcacaggacaggcattcaagatgtctgattcagctacaaaaaaa
ttgattggtgaatggaaacagttctatcctatctcatgttgcttaaaggaaatgtctgaa
gaaaaacaggaagatatggattgggaagatgattctctagctgcagtagaagttcttgtt
gctggtgtccgaatgatctacccggcatgctttgttctagtccctcagtcagacattcct
actcctagctctgtgggctcctctcactgttcagcttcttgcttgggtgtccaccaagtg
cctgcttccacaagagatcctgctatgtcttcggttactcttacaccacctacatctcct
gaggaagtccagacagttgatcctcagtctgctcagaagtgggtcaaattttcttcagta
tctgatggcttcaactctgatagtactagccaccatggtgggaaaataccccaaaaatta
gccagtcatgtcgtggatagagtttggcaagagtgcaatctgaacagagcacagaacaag
aggaagtattctgcttcatcaggtggcctgactgaagaagagatacctgataaggtagca
tgctgggattttgttgaagccacacaaagaacaagttgcagttgttcaaggcacaaaaat
ctcaagccaagaaactctggacaaggacaggcaccgtctttaagtcagcaacaacaagta
cttcctaagcacaagaccaatgaaaaacaagaaaagagtgaaaagccgcagaaacgcccc
ttgactccttttcatcatcgtatatctattagtgatgatgttggaatggacgcagattca
gctagccaaagacttgtgatctctgctcctgatagtcaagtgagattttcaaacctccga
actaatgatgtagcaaagactcctcagatgcatggcactgaaatggcaaactcacctcag
ccacccccacttagtcctcacccatgtgatgtagctgatgaaggagtaaccaaaacacct
tcaactcctcagagtcagcatttttatcaaatgcccacaccagatcctttggttcctgcc
aaaccaatggaagataggatagacagtttgtcccagtcttttccacctcagttccaggaa
actgtagaacctacagtgtatattggtacggcagtaaacttggaagaagatgaaactaat
aaagcttggaaatattacaaggtcccaaagaaaaaggatgtagagtttttaccacctcaa
cttccaggtgataaattcaaggatgatccagttggaccttttggacaggaaagtgtaaca
tcagttacagagttaatggtgcagtgtaagaaacctttaaaagtttctgatgaattagta
cagcaatatcaaattaaaaaccagtatatttcagcagtagcatctgatgcagaacaagaa
cctaaaatcgatccatacgcatttgttgaaggagatgaagaattcctttttcctgataaa
aaagatagacaaaatagtgagagagaagctggaaaaaaacataaggtagaagatgggaca
tctagtgtcacagtcttatcacatgaagaagatgctatgtcattatttagttcctctgtt
aagcaagatgcaccccgtcctagtagtcatgcccgtcctccatcaaccagtttgatttat
gactcagatttggctgtttcttacactgaccttgataatctcttcaattctgatgaagat
gaactaacacctggatctaaaaaatcagtgactggatcagatgataaagccaactgcaaa
gaatcaaagacaggaaatctggatccgttatcttgcataagcactgcagatcttcatnaa
atgtatcctacaccaccatcattgngacaacatattatgggattttccccaatgaatgtg
aataataaagactatggtagtatggatactacacctggaggaactgttctagaaggaaat
agttctagtataggagcacagttcagaattgaagttgatgaagggttttgtagccccaaa
ccttctgaaattaaagatttttcttatgtttataagcctgaaaactgtcaagttctagtg
ggatgttccatgtttgcacctctaaaatctctaccaagccaatgtctgccccctatcaag
ttgccagaagattgtgtttaccgccagagttggactgttggaaaattggaattacttcct
tcagggtctacaatgccatttatcaaagaaggtgatggaagtaatatggatcaagaatat
ggacctgcttatactcctcaaacccatacttcttttgggatgcctcctagcagcgcacct
cctagtaacagtggagcaggaattcttccttctccatccacccctaggtttccgactcca
aggactccaaggactcctcgaactcctcgtggagctggtggacctgcaagtgctcaaggt
tcagtcaaatatgaaaactcagacttgtattcaccagcttccacgccctctacatgtaga
ccccttaattctgttgaacctgcaactattccttccatccctgaagcacacagtctttat
gtaaacctcattctttcagaatcagttatgaatttgtttaaagactgtaactttgatagt
tgctgtatctgtgtctgcaacatgaatatcaagggtgccgatgttggagtttacattcca
gatccaacacaggaagcacagtatagatgtacctgcggcttcagtgctgtcatgaacaga
aaatttggaaacaattcaggattatttcttgaagatgaactagatatcataggacgcaac
acagactttggcaaagaagcagaaaaacgttttgaagctctcagggctacctctgctgaa
catattaatggaggtctaaaggaatcagaaaaactgcctgatgaattgatattattgcta
caagatcagtgtactaatttattttcaccctttggagtatcagaccaagatccttttccc
aaaattggtgtaattagcaattgggtacgtgtcgaagagcgggactgttgcaatgactgc
tatcttgcattagaacatgggcgtcagttcatggataatatgtcagggggaaaagttgat
gaagcacttgtgaaaaactcatgcttacatccctggtctaagagaaatgatgtgagtatg
cagtgctcacaggatattcttcgaatgctcctttctcttcagcctgttcttcaagatgct
attcagaaaaaaaggacagtaagaccttggggagttcaaggtcctctcacttggcaacag
tttcacaaaatggctggtcgaggctcttacggaactgatgaatctccagaaccactgcca
attcccacatttttgttgggttatgattatgattttctggtgctttctccatttgctctc
ccttattgggagagacttatgctggaaccctatggatctcaaagagatatagcatatgtt
gtactatgtccagagaatgaagctttgttacatggagccaaaagcttttttagagatctt
actgcaatatatgagtcttgtcgattgggtcaacatagacctatttctcgactgttgacg
gatgggattatgagagttggacctactgcatcaaagaaactgtcagaaaagattgtagca
gaatggttttctcaggcagctgatggcaacaatgaagcattttctaaactcaagctttat
gctcaagtctgcagatacgacctaggtccttatctagcctcgcagcccttggacagctca
ctactttcacagccaaatttagttactcctacaagtcagtctctggttactccacctcag
atgacaaacactggaagtgctaatacaccgtctgccacattagtatctacagcaagcagc
accatgacgatgacttcaggtgttgccatatcttcttcagttgccacaaccagttcaact
ttgaccacaagttcatcttcatcatcttctaacttgaatagtggagcatcatcaaacaaa
ctaccttcatttccaccctttggcagtatgaacagtagtgttacaggatccatgtctgca
caaacaagtacggttcagggtagccagctaggtgggcagcagtcatcagctctgcagacg
gctgggatttctggagagtcatcttcacttcccactcaaccacatcctgatgtgtctgaa
agcacaatggatcgggataaagtgggaatccccacagatggtgattcacatgctattacc
tatccacctgcgattgttgtttatattattgatccttttacgtatgaagacaaagacgag
agcactaactcttctaacgtgtggactttggggttactccgatgctttctggaaatggtc
cagactcttcctcctcatatcaagagtactgtttctgtacagattgttccttgtcagtac
ctgttacaacctgtgaagcatgaagacagacaaatttatactcagcatttaaaatccctg
gctttttcggcttttacccagtgtcggagaccacttccaacatcaaccaatgtgaaaaca
ttgacaggctttggtccaggtttagccatggaaactgctcttaaaagtcccgatagacca
gaatgtattcgactttatacacccccatttattctggctcctgtgaaggacaaacagaca
gaactaggagaaacatttggagaagctggacagaaatacaatgttcttttcgtgggctac
tgtttatcacatgatcaaaggtggattcttgcatcttgcacagatctatatggagaactt
ttagaaacatgtatcataaacatcgatgttccaaatagggctcgtcggaaaaaaggttct
gctagaagatttggtctacagaaactttgggagtggtgcttaggacttgtacaaatgagt
tcattaccatggagagttgtaattggccgtctaggaaggattggtcatggagaattaaaa
gactggagctgtttgctgagtcgtcgaaacttgcagtctctaagtaaaaggctcaaagac
atgtgtagaatgtgtggtatatctgctgcagactctcccagcattctgagtgcttgttta
gtagcgatggaaccccagggctcttttgttattatgccagattcggtatcaacaggttcg
gtatttggaagaagcaccactctaaatatgcagacatctcagctaaataccccacaggat
acatcatgcactcatatacttgtgttccctacttctgcttctgtacaagtagcttcagct
acttataccactgaaaatttagatttagctttcaatcctaacaatgatggagcagatgga
atgggtatctttgatttattagatacaccagatgatcttgatcctgatatcattaatatc
cttcctgcatctccgactgcatctcctgtacattctccaggatctcattaccctcatgga
ggtgatactggcaagggtcagggtactgatcggctactttcaacagaatctcatgatgaa
gtaactaatattcttcagcagccattggcccttggatactttgtatcaactgccaaagcg
ggtccattacctgactggttctggtcagcatgtcctcaagcacaatatcaatgtcccctt
tttcttaaggcctctttgcacctccacgtgccttcagtgcaatctgacgagctgcttcac
agtaaacactcccacccacttgactcaaatcagacttccgatgtcctcaggtttgttttg
gaacagtacaatgcactctcctggctaacctgtgaccctgcaatccaggacagacgctca
tgtctcccaattcattttgtggtgctgaatcagttatataactttatcatgaatatgctg
tga
DBGET
integrated database retrieval system
