Cavia porcellus (domestic guinea pig): 100729317 Help Entry 100729317         CDS       T07777                                  Symbol Atxn2 Name (RefSeq) LOW QUALITY PROTEIN: ataxin-2   KO K23625   ataxin 2/2L Organism cpoc  Cavia porcellus (domestic guinea pig) Pathway cpoc05014   Amyotrophic lateral sclerosis cpoc05017   Spinocerebellar ataxia cpoc05022   Pathways of neurodegeneration - multiple diseases Brite KEGG Orthology (KO) [BR:cpoc00001]  09160 Human Diseases   09164 Neurodegenerative disease    05014 Amyotrophic lateral sclerosis     100729317 (Atxn2)    05017 Spinocerebellar ataxia     100729317 (Atxn2)    05022 Pathways of neurodegeneration - multiple diseases     100729317 (Atxn2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cpoc03019]     100729317 (Atxn2) Messenger RNA biogenesis [BR:cpoc03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Common to processing body (P body) and stress granule      100729317 (Atxn2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SM-ATX LsmAD PAM2 LSM Motif Other DBs NCBI-GeneID:  100729317 NCBI-ProteinID:  XP_023417785 Ensembl:  ENSCPOG00000001390 LinkDB All DBs Position Unknown AA seq 1299 aa AA seqDB search MRSAAAAQRNPATALEPRRRTSARWPGRRSLWRTARRSGRGGGVGPGAYPSAAPPPPGPG PPPSAQCSPPSASNCFGSNGNSGGESRPGSRQLLALGGPPRPFVVVLIPLASSAAPPAAL LRASPLGSRASLPRSGVSSARSALGCPRPACEPVYGPLTMSLKPQQQQQQPPAGATVRKP SGGLLTSPITAPSPSSVSSSSVTASSSSSSSSSSSSSSAAAGSGRPGLGRGRNSSKGLPQ STISFDGIYANMRMVHILTSVVGSKCEVQVKNGGIYEGVFKTYSPKCDLVLDAAHEKSSE SGSGPKREEIMESILFKCSDFVVVQFKDMDSSYARRDAFTDSAISAKVNGEHKEKDLEPW DAGELTASEELEALENDVSNGWDPNDMFRYNEENYGVVSTYDSSLSSYTVPLERDNSEEF LKREARANQLAEEIESSAQYKARVALENDDRSEEDKYTAVQRNPSEREGHSANTRENKYI PPGQRNREVISWGSGRQNSPRMGQPGSGSMPSRSTSHTSDFNPNSGSDQRVVNGGVPWPS PCPSPSSRPPSRYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPSAHGSPAPVSTMPKR MSSEGPPRMSPKAQRHPRNHRVSAGRGSISSGLEFVSHNPPSEASTPPVARTSPAGGTWS SVVSGVPRLSPKTHRPRSPRQNSVGSTAGGPVLASPQAGIIPAEAVAIPVPVASPTPASP ASNRAVTPSVEAKDSRLQDQRQNSPAGNKENTKPSETSPTFSKTESKGISPVVSEHRKQI DDLKKFKNDFRLQPSSTSESMDQVLNKNREGEKSRDLIKEKIEPSAKDSFIENSSSTCTS GSSKPNSPSISPSILSTTEHKRGPEVTSQGVQTSSPACKQERDDKEEKKDAAEQVRKSTL NPNAKEFNPRSFSQPKPSTTPTSPRPQAQPSPSMVGHQPPTPVYTQPVCFAPNMMYPVPV SPGVQPLYPIPMTPMPVNQAKTYRAVPNMPQQRQDQHHQSTMMHPASAAGPPIVATPPAY STQYVAYSPQQFPNQPLVQHVPHYQSQHPHVYSPVIQGNARMMAPPAHAQPALVSSSATQ YGAHEQTHAMYACPKLPYNKETSPSFYFAISTGSLAQQYAHPNATLHPHTPHPQPSATPT GQQQSQHGGSHPAPSPVQHHQHQAAPALHLASPQQQSAIYHAGLAPTPPSMTPASNTQSP QNSFPAAQQTVFTIHPSHVQPAYTNPPHMAHVPQAHVQSGMVPSHPTAHAPMMLMTTQPP GGPQAALAQSALQPIPVSTTAHFPYMTHPSVQAHHQQQL NT seq 3900 nt NT seq  +upstreamnt  +downstreamnt atgcgctcggcggccgctgctcagcggaaccccgccacggctctagagcctcgccgccgc acctcggccaggtggcccgggcggcgctcgctctggcggacggcgcggcgcagcgggcgg ggcggtggcgtggggccgggcgcatatccctccgccgcccctcccccgcccggccccggc cccccgccctccgcgcagtgctcgcctccttctgcctcaaactgttttggtagcaacggc aacagcggcggcgagtcccggcccggctcccggcagctcctcgctcttggcgggcctccc cgccccttcgtcgtcgtccttatacccctcgccagctcggccgcccccccagccgcactg ttgcgcgcctctccgctcggctcccgtgcgtccctgccgcgctccggtgtctcctccgcg cgctcggctctcggttgtccccgcccggcgtgcgagccggtgtatgggcccctcaccatg tcactgaagccccagcagcagcaacagcagccgcccgcgggtgccactgtccgcaagccc agcggcggccttctcacatcgcctatcaccgcgccgtcaccgtcctcagtctcgtcatcc tcggtcacggcttcctcctcctcctcctcttcgtcctcctcctcttcttcctcggcggct gcaggcagcgggcggcctggcttgggcagaggtcgaaatagtagcaaaggactgcctcag tctacgatttcttttgatggaatctatgcaaatatgaggatggttcatatacttacatca gttgttggatccaaatgtgaagttcaagtgaaaaacggaggtatatatgaaggagttttt aaaacatatagtcctaagtgcgatttggtgcttgatgctgcacatgagaaaagttcagaa tctggttcaggcccaaaacgtgaagaaataatggagagcattttgttcaaatgttcagac tttgttgtggtgcagtttaaagatatggactccagttatgcaagaagagatgcttttact gactccgcgatcagtgctaaagtgaatggtgaacacaaagagaaggacctggagccctgg gatgcaggtgaactcacagccagtgaggaactagaagctttggaaaatgatgtatctaat ggatgggatcccaatgatatgtttcgatataatgaagaaaattatggtgtagtgtctaca tatgatagcagtttatcttcatatacggtgcccttagaaagggataactcagaagaattt ttaaaacgagaagcaagggcaaaccagttagcagaagaaattgaatcaagtgctcagtac aaagctcgggtggccctggaaaatgatgataggagcgaggaagacaagtacacagcagtt cagagaaatcccagtgaacgcgaggggcacagcgcaaacactagggaaaataaatatatt cctcctggacaaagaaatagagaagtcatatcttggggaagtgggagacagaattcaccg cgtatgggccagcctggatccggctccatgccatcaagatccacttctcacacttcagat ttcaacccgaattctggttcagaccaaagagtagttaatggaggtgttccctggccatcg ccttgcccatctccttcctctcgcccaccttctcgctaccagtcaggtcccaactctctt ccacctcgggcagccacccctacacggccgccctccaggcccccctcgcggccatccaga cccccgtctcacccctctgctcatggttctccagctcctgtctctactatgcctaaacgc atgtcttcagaagggcctccaaggatgtccccaaaggcccagcggcaccctcgaaatcac agagtctctgctgggaggggttccatatccagtggtctagaatttgtatctcacaaccca ccaagtgaagcatctactcctccagtggcaaggaccagccccgcagggggaacgtggtca tcagtggtcagtggggttccaagattatctcccaaaactcatagacctcggtctcccaga cagaacagtgttggaagtactgccggtgggccggttcttgcttctcctcaggctggcatt attccagctgaagctgttgccatacctgttccagttgcgtctcccacacctgcaagtcct gcatccaacagagctgtaaccccgtctgttgaggccaaagactccaggcttcaagatcag aggcagaactctcctgcagggaataaagaaaatactaaacccagtgaaacttcacctact ttctcaaaaactgaaagtaaaggtatatcaccagttgtttctgaacatagaaaacagatt gatgatttaaagaaatttaagaatgactttaggttacagccaagttccacttctgaatct atggatcaagtactaaataaaaatagagagggagaaaaatcaagagatttgatcaaagag aaaattgaaccaagtgctaaggattctttcattgaaaatagcagcagcacctgcactagt ggcagcagcaagccgaatagccccagcatctccccatcaatacttagtactacggagcac aagcggggacccgaggtcacatcccaaggggtccagacttctagcccagcgtgtaaacaa gagagagacgataaagaggagaagaaggatgcagctgagcaagttaggaagtcaacattg aatcccaatgccaaggagttcaaccctcgttctttttctcagccaaagccttctaccacc ccaacttcacctcggcctcaagcacaacctagcccttctatggtgggtcatcaaccgcca actccagtttatactcagcctgtttgttttgcaccaaatatgatgtatccagttccagta agcccgggcgtgcaacctttatacccaatacccatgacgcctatgccagtgaatcaagcc aagacatatagagcagtaccaaatatgccccagcagcggcaagaccagcaccatcagagc accatgatgcaccccgcttcagcagcaggcccgcccatcgtagccacgcccccagcgtac tccactcagtatgtggcctacagtcctcagcagttcccaaatcagccgctggtccagcat gtgccgcactatcagtctcagcacccccatgtctacagtcctgtgatacaggggaatgct agaatgatggcgccgccagcacacgcccagcccgccttggtgtcttcatcagcaactcag tacggcgctcatgagcagacgcatgccatgtatgcatgtcccaaattaccatacaacaag gagacaagcccttctttctactttgccatttccacgggctccctcgctcagcagtacgca caccctaatgctaccctgcacccacatactccacatcctcagccttcagctacccccact ggacagcagcagagccagcatggtggaagtcatcctgcacccagtcctgttcagcaccat cagcaccaagccgccccggcgctccacctggccagtccacagcagcagtcagccatttat cacgcagggcttgcgccgaccccaccttccatgacgcctgcctccaatacgcagtcgcca cagaatagtttcccagcagcacagcagaccgtcttcacaattcatccttctcatgttcag ccagcatacaccaacccgccccacatggcccatgtacctcaggctcatgtacagtcagga atggttccttctcatccaactgcccatgcgccaatgatgctaatgacgacacagccaccc ggcggtccccaggccgccctcgctcaaagtgcactacagcccattccagtctcgacaaca gcgcatttcccctatatgacgcacccttcagtacaagcccaccaccaacagcagttgtaa

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