Cavia porcellus (domestic guinea pig): 100729404
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Entry
100729404 CDS
T07777
Name
(RefSeq) LOW QUALITY PROTEIN: general transcription factor IIH subunit 2-like
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03022
Basal transcription factors
cpoc03420
Nucleotide excision repair
cpoc05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100729404
09124 Replication and repair
03420 Nucleotide excision repair
100729404
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100729404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpoc03021
]
100729404
03400 DNA repair and recombination proteins [BR:
cpoc03400
]
100729404
Transcription machinery [BR:
cpoc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
100729404
DNA repair and recombination proteins [BR:
cpoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
100729404
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
IBR
Motif
Other DBs
NCBI-GeneID:
100729404
NCBI-ProteinID:
XP_023421412
LinkDB
All DBs
Position
Unknown
AA seq
343 aa
AA seq
DB search
MMRHLYVVIDGSWTMEDQDLKPNRLTCTLKVQKDHLKYFVEEYFDQNPISQIGIIVTKSK
RAEKLTELSGNPRTHITSLKKAIDMTCHGEPSLYNSLSMAMQTLKHMPGHTSREVLIIFS
SLTTCDPSNIYDLIKILKAAKIRVSVVGLWAEVRVCAALARETGGMYHVILDESHYKELL
MHHVSPPPASSSSECSLICMEFPQHTIAALSDQDAKPSFSMAHLDSSSEPGLTLGGYFCP
QCQAKYCELPVECKICGLSLVSAPHLARSYHHLFPLDXFQEIPLEEYKGERFCYGCQGQL
KDQHVYVCTVCQNVFCVDCDVFVHDSLHCCPGCIHKIPIPSGI
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgccacctttatgtggtgatagacggatcttggacaatggaggaccaagattta
aagcctaatagactgacatgtacattaaaggtacagaaagatcacttaaaatactttgta
gaagagtattttgatcaaaatcctatcagtcagattggaataattgtaactaagagtaaa
agagctgagaaactgactgaactctcaggaaacccaaggacacacataacatctttgaag
aaagctattgatatgacctgtcatggagaaccatctctttataattccttaagcatggcc
atgcagactctaaaacacatgcctggacacacaagtagagaagtcctcatcatctttagc
agtcttacaacttgtgatccatcgaatatatatgatctgattaagatcctgaaagcagct
aaaatcagagtgtccgtcgttgggctgtgggcagaggttcgggtttgcgctgcacttgct
cgggaaactggaggcatgtaccatgtgattttagatgaaagccactacaaagaattgcta
atgcatcatgttagtcctcctcctgccagctcaagttctgaatgctcccttatttgtatg
gaatttcctcagcacaccattgctgctttgtctgatcaagatgcaaaaccttctttcagc
atggcgcacctggatagcagttctgaaccgggacttacattaggaggctatttctgccca
cagtgtcaggcaaagtactgtgagcttcctgttgaatgtaaaatatgtggtctttctttg
gtctcagctccccacttggcgcggtcgtatcatcatttatttcccttggatngctttcaa
gaaattcccctagaagaatataaaggggaaagattttgttatggatgtcaggggcaactg
aaggaccaacatgtctatgtttgcactgtgtgccagaatgtattttgtgtggactgtgat
gtttttgttcatgactctctccactgttgtcctggctgcattcataagattccaattcct
tcaggtatttga
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