Cavia porcellus (domestic guinea pig): 100729648 Help Entry 100729648         CDS       T07777                                  Symbol Crocc Name (RefSeq) rootletin isoform X1   KO K16469   rootletin Organism cpoc  Cavia porcellus (domestic guinea pig) Brite KEGG Orthology (KO) [BR:cpoc00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:cpoc03037]     100729648 (Crocc) Cilium and associated proteins [BR:cpoc03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    100729648 (Crocc) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Rootletin Crescentin ATG16 PUMA_CC Motif Other DBs NCBI-GeneID:  100729648 NCBI-ProteinID:  XP_003471435 Ensembl:  ENSCPOG00000007674 UniProt:  H0VAM7 LinkDB All DBs Position Unknown AA seq 2007 aa AA seqDB search MNLGLAGSLEVQLALETVIQTLESIVLQPDQEKGLSVQDLAWGSPIGCLPSCIREIVSRN LNQPKSPAPPPALEMASLLPMQEENRLLQQELSRLEDLLAQSRAERDELAIKYTAVSERL EQAMRLESGELETQEPQGLVRQSVELRRQLQEEQASYRRKLQAYQEGQQRQAQLVQRLQA KILQYKTKCSELEQQLLERSTELERHRLKDTEHRQDLESALLRLEEEQQRSASLAQVNAM LREQLDQAGSANKALSEDIRKVTSDWTRSCQELEQREAAWRREEESFNAYFSSEHSRLLL LWRQVVGLRRLVSEAKMYTERDLLQLGGELARTSRAVQEASLGLSAGLQLAESRAEAALE KQALLQAQLEEQLRDQLLREKDLTQQQAQSDLDKASLSTRVTELALAVERLQSQNLEKDR VNKALTEKLEALESLRLQEQAALEPDDGEGLQQTLRDLAQAVLLDPESGIQLSGSERTAD ASDGSLRGLSGQRTPSPPRRSSPGRGRSPRRGPSPACSDSSTLALIHSALHKRQLQVQDM RGRYEASQDLLGTLRKQLGDSEGERRALEEQLQRLRDKSEGAAQAHEDAQREAQRLRNAN DLLSREKGSLAHSLQVAQQQAEELRQELEKLQAAQEELRRQRDRLEEEQEETVQDGARAR RELERSHRQLEQLELKRSGLAKELVEVREALSYASLQRDVLQAEKAEVAEALTKAEAGRV EFELSMTKLRAEEASLRDALSKLSALNESLAQDKLGLNRLVAQLEEEKAALLGKQRQAEH EATSALEEQRRLEQLRLEQEVERQGLEGSLHSAEQARDELGQQLHTLRGEHSRLQEQLAQ LSRQLSGREQELEQAQRESQRQVEALERATREKEAVAKERASLVVQLAAAEREGRTLAEE VTRLRLEKEALESSLFEVQRQLSQLEARREQLEADGQALLVAKETLAGELAGLRQQIANT EEKAALDKELMAQKLAQAEREAQASLREQRAAHEEDLQRLHREKEVAWRELQTERAQLQG QLQREREELLARMEAEKEELSEEIAALQQERDEGLLLAESEKQQALSLKESEKTALSEKL MGTQHSLAAISLEMERQKRDAQSRQEQDRSTVNALTSELRDLRAQLEEAAAVHAQEVQRL QEQARDLGRQRESCLREAEELRAQLRLLEDAKDGLRRELLETQRKVRDSQEGREAQRQEA SELRRSLSEGAKEREALRHSNEELRAAVRRAESERISLKLANEDKEQKLALLEEARAAVG KEAGELRAGLQEAERSRLEARRELQELRRQMKMLDSENARLSQELAELQGRLALGERAEK ESRREALGLRQKLLKGEASVEAVQQELQGCQRKLQEQEAAFRARERGLQGSLEEARGAQK KQLDHARSLELKLEAARAEAAELGLRLSAAEGRAQGLEAELARVEAQRRAAEAQLGGLRS ALRRGLGLGRVPSPAPRPAPGSPASDSPVGGSGEGLSSPSPLERSPESQPPSPGPATSPG PADLDPEAVRSALRDFLQELWGTQRERDELRAQTSTLSRQLAEMEAEKDSVTSRARQLQK AVAESEEARRSVDGRLSGAQAELALQEESVRRSERERRAMLDQVASLERSLQATESELRA SQEKMSKMKANEAKLESDKRRLKEVLDASESRTIKLELQRRALEGELQRSRLGLSDREAH AQALQDRVDSLQRQVADSEVKARTLQLTVERLNGALAKVEESERVLRDKVQNLTQALAQS NTSLTSTQDKNLQLQKALTACEHDRQVLQERLDAARQALSEARKQSSSLGEQVQTVRGEL ADLELQRAEVEGQLQQLQEVLRQRQEGEAQALHSVQKLQDERRLLQEHLGSLQRALAQLE AEKREVERSAQRLEKDRMALRKTLDKVEREKLRSHEDTVRLSAEKGRLDRSLTGAEQELA KAQRQIQQLEAQVVALEQNHSPAQLEVDEQQQLELQQEVGRLHSTSVQPKHAHRQRVPGL QEQVSTLKGQLRKSSAPLSPPSGPPEK NT seq 6024 nt NT seq  +upstreamnt  +downstreamnt atgaacctggggctggcggggtcgctggaggttcagctagcattggagaccgtcatccag accctggagagcatcgtcctccagccagaccaggagaaaggtctgagtgtgcaggacctg gcctggggctctccgattggctgcctgccttcctgtatcagggagattgtctcccgcaac ctcaaccagcccaagagcccagcccctccgccggccctggaaatggcatcacttctgccg atgcaggaggagaaccggttactgcagcaggagctgtcccgtctggaggacctgctggcc cagagccgcgctgagcgagatgagctggccattaagtatactgcggtcagcgagaggctg gagcaggcgatgcggctggagtctggagagctggagacacaggagccccaggggctggtt cggcagagtgtggagcttcggaggcagcttcaggaggagcaggcctcctaccggcgcaag ctgcaggcctaccaggagggccagcagcggcaggcccagctggtgcagaggctgcaggcc aagattctccagtacaagacgaagtgctcagagctggagcagcagctgctggagcggtcc acagagctggaacggcaccggctgaaggacacggagcaccgccaagacctggagagcgcc ctcctccgcctggaggaggaacagcagagaagcgccagcctggcccaggtgaacgccatg cttcgagaacagttggaccaggcgggctcggccaacaaggctctgagcgaggacatacgc aaagtgaccagtgactggacacgcagctgccaggagctggagcagcgggaggcagcatgg aggcgtgaggaggagtccttcaacgcctacttcagcagtgagcacagccgcctgctgctc ctctggagacaggtcgtggggctccggcggctggtcagcgaagccaagatgtacacggag agggacctgctgcagctgggaggggagctggcccggacatcacgggctgtgcaggaggcc agcctagggctgagtgcgggtctgcagctggctgagagccgggcagaggcggctctagag aagcaggcactgctgcaagcacagctggaggaacagcttcgggaccagctgctgcgtgag aaggacctgactcagcagcaggcccagagtgacctcgacaaagccagcctcagcacccga gtgacagagctggccctggcagtggagcgccttcagagccagaacctggagaaggatcgg gtcaacaaggccctgacggagaagctggaggccctggagtctctgcggctccaggagcag gcagctctggagccagatgatggagaggggctgcagcagaccctgagggacctggcacag gcagtcctgttggacccggagagtggcatccagctcagcggctccgagcgcactgctgac gcctccgatggcagcctgcgggggctctctggccagcggaccccatccccgccgcgccgc tcctcgcctggccgtggccgttctccccgccgaggcccgtccccggcctgctcagactcc tccacgctcgcccttattcactccgccctgcacaagcgccagctccaggtccaggacatg cgtgggcgctacgaggccagccaggacctgctgggcaccctgcggaagcagcttggtgac agcgagggtgagcggcgtgccctggaggagcagctacagcgcctgcgggacaagtcggag ggagccgcccaggcccacgaggatgcccagcgcgaggctcagcgtctgcgtaacgccaat gacctcctgagcagggaaaagggcagcctggctcacagcctgcaggtggcccagcagcag gccgaggagctgcgccaggagctggagaagctgcaggctgcccaggaggagctgcggcgg cagcgggatcgcctagaggaagagcaagaggagacggtgcaggacggtgcccgggcccgc agggagctggagcgcagccacagacagctggagcagctggaattgaagcgctcggggctg gcgaaggagctggtggaggtgcgggaggcgctgagctatgcctccctacagcgggacgtg ctgcaagctgagaaggccgaggtggctgaggcactgaccaaggcagaggctggccgagtg gagttcgagctgtccatgaccaagctgagggcagaggaggcctctctgcgcgatgccctg tccaagctgagcgccctcaacgagagcctcgctcaggacaagctgggcctgaatcgtctc gtcgctcagctggaggaggaaaaggcagccttgctggggaagcagcggcaggcagagcat gaggccacctcagctttggaggagcagcggcggctggagcagctgcggctggagcaggag gtggagcggcagggcctggagggctccctgcactccgctgaacaggcccgggacgagctg gggcagcagctccacacgctgcgtggcgagcatagccggctgcaggagcagctggcccag ctctcgcggcagctgagcgggagggagcaggagctggagcaggcccagcgggagtcgcaa cggcaggtggaggcactcgagcgagccacccgggagaaagaggcggtggccaaggagcga gccagtctggttgtgcagctggcggcagccgagcgcgaaggccggaccctggcagaggaa gtcacgcgtctgcgcttggagaaggaagccctggagagcagcctgtttgaggtgcaaagg cagctgtctcagcttgaggcccgccgcgagcagctggaagccgatggacaggccctgctg gtggccaaggaaaccctggccggggagctagcaggcctgcggcagcagatagcaaacaca gaggagaaggcagctctggacaaggagctcatggcccagaaactggcgcaggctgagcga gaagcccaggcctctctacgggagcagcgggcagcccacgaagaggacctgcagcgactc catcgagagaaggaagtggcctggcgggagcttcagacagagcgggcccagctgcagggc cagctgcagcgggagcgggaggagctgctggcccggatggaggctgagaaggaggaactg agcgaggagatcgccgcactgcagcaggagcgggatgagggcctgctcctggctgagagc gagaagcagcaggccctgtccctgaaggagtcggagaagacagcgctgtcagagaagctg atggggacacagcacagcctggctgccatctccttggagatggagcggcagaagcgagat gcccagagccggcaggagcaggaccggagcaccgtgaatgccctgacgtccgaacttcga gacctccgggcccagcttgaggaggccgctgctgtccacgcccaggaagtgcagaggctg caggagcaggcccgggacctgggcaggcagcgggagtcctgcctgcgggaggcagaagag cttcgggctcagctgcgcctgctggaggacgcgaaggacgggctgcggcgggagctgctg gagacccagcgcaaggtgcgcgacagccaggaaggccgagaggcccagcgccaggaggcc agtgagctgcggcgcagcctgagcgagggcgccaaggagcgtgaggccctgcggcactcc aatgaggagctgcgggcggccgtgcggagggcggagagcgagcgcatcagcctgaagctg gccaacgaggacaaggagcagaagctggcgctcctggaggaggcgcgggcagccgtgggc aaggaggccggggagctgcgtgcagggctgcaggaagcagagcgctcgcggctggaggcg cggcgggagctgcaggagctgcggaggcagatgaagatgctggacagtgagaacgccagg ctgagccaggagttggcagagctgcagggccgcctggccctgggtgagcgggcagagaag gagagccgcagggaggccctgggtctgcggcagaagctactgaagggtgaggccagcgtg gaggccgtgcagcaggagctccagggatgccagcggaagctgcaggagcaggaggccgcg ttccgggcccgcgagcgaggcctgcagggctccctggaggaggcgcgtggggcgcagaag aagcagctggaccacgcccgcagcctggagctaaagctggaggcggcccgggcagaggcc gcagagctggggctgcggctgagcgcggcagagggccgagcgcagggcctggaggcagag ctggcccgcgtggaggcgcagcggcgcgctgcagaggcccagttgggcggcctgcgctcc gctctgcgccggggcctgggcctgggccgagtgcccagtcccgccccgcgtcccgcgcct ggctccccggccagcgactcgcccgtaggaggaagtggagaaggactcagcagccccagc cccttggaacgcagccctgagtcccagcccccgtccccaggacctgccacctccccgggc cctgcagacctggacccagaggcagtgagaagtgctctccgggacttcctgcaggagctg tggggcacccagcgagagcgggatgagctccgggcccagaccagcaccctcagtcggcag ctggctgagatggaggccgagaaggacagtgtgacttctcgggccaggcagctgcagaag gccgtggccgagagcgaggaagcccggcgcagtgtggatgggcggctgagcggggcccag gcggagctggcactacaggaggagagcgtgcggcgtagtgagcgggagcgcagggccatg ctggaccaggtggcctccctggagaggagcctgcaggccaccgagagcgagctccgggcc agccaggagaagatgagcaagatgaaggccaatgaggcgaagctggagagcgacaaacgg cgcctgaaggaggtgctggatgcctccgagagccgcaccatcaagctggagctgcagcgg cgggcgctcgagggcgagctgcagcggagtcgcctgggcctcagtgaccgtgaggcccat gcacaggccctgcaggatcgcgtggactccttgcagagacaggtggccgacagtgaggtg aaggcgaggaccttgcagctgacagtggagcggctgaatggggccctggccaaggtggag gagagcgaaagggtcctgcgggacaaagtacagaacctgacacaggccctggcccagagc aacaccagcctcaccagcacccaggacaagaacctgcagctgcagaaggcgctgactgcc tgtgaacatgaccgccaggtgctccaggaacggctggacgctgcccggcaggcactgtcg gaagctcggaagcagagcagctctttgggggagcaggtgcagacggtgcggggtgagctg gctgacttggagctgcagcgggcagaggtggagggccagctgcaacagctgcaggaggtg ctacggcagcggcaagagggtgaggcccaggcgctgcattcggtgcaaaagctgcaggat gagcgacggctgctgcaggagcacctgggcagcctgcagagggccctggcccagctggaa gccgagaagcgggaggtggagcgctctgcccaacggctggagaaggaccgcatggccctc aggaagacgctggacaaggtggagcgggagaagctgcgcagccacgaggacacggtgcgg ctgagcgcggagaagggccgcctggaccgctcgctcaccggtgctgagcaggagctggcc aaggcccagaggcagatccagcagctggaggcccaggtggtggccctggagcagaaccac agtccagcccagctagaggtggacgagcagcagcagctggagctgcagcaggaggtgggg cgcctgcacagtaccagtgtgcagcccaagcatgcccaccgccagcgggtcccggggctg caggaacaggtgtccacgctgaaggggcaacttcgaaagagctcagcgccattgtctcca ccctctggcccccctgagaaatga

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