Cavia porcellus (domestic guinea pig): 100729719 Help Entry 100729719         CDS       T07777                                  Symbol Ptch1 Name (RefSeq) protein patched homolog 1   KO K06225   patched 1 Organism cpoc  Cavia porcellus (domestic guinea pig) Pathway cpoc04024   cAMP signaling pathway cpoc04340   Hedgehog signaling pathway cpoc04360   Axon guidance cpoc05200   Pathways in cancer cpoc05205   Proteoglycans in cancer cpoc05217   Basal cell carcinoma Brite KEGG Orthology (KO) [BR:cpoc00001]  09130 Environmental Information Processing   09132 Signal transduction    04340 Hedgehog signaling pathway     100729719 (Ptch1)    04024 cAMP signaling pathway     100729719 (Ptch1)  09150 Organismal Systems   09158 Development and regeneration    04360 Axon guidance     100729719 (Ptch1)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     100729719 (Ptch1)    05205 Proteoglycans in cancer     100729719 (Ptch1)   09162 Cancer: specific types    05217 Basal cell carcinoma     100729719 (Ptch1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Sterol-sensing Patched Motif Other DBs NCBI-GeneID:  100729719 NCBI-ProteinID:  XP_023420143 Ensembl:  ENSCPOG00000002376 LinkDB All DBs Position Unknown AA seq 1294 aa AA seqDB search MFNPQLMIQTPKEEGANVLTTEALLQHLDSALQASRVHVYMYNRQWKLEHLCYKSGELIT ETGYMDQIIEYLYPCLIITPLDCFWEGAKLQSGTAYLLGKPPLRWTNFDPLEFLEELKKI NYQVDSWEEMLNKAEVGHGYMDRPCLNPADPDCPATAPNKNSTKPLDMALVLNGGCHGLS RKYMHWQEELIVGGTVKNSTGKLVSAHALQTMFQLMTPKQMYEHFKGYEYVSHMNWNEDK AAAILEAWQRTYVEVVHQSVAQNSTQKVLSFTTTTLDDILKSFSDVSVIRVASGYLLMLA YACLTMLRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAATTQVLPFLALGVG VDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR AFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRLDIFCCFTSPCVSRVIQVEPQAYT EAHGAMRYSPPPPYSSHSFAHETHITMQSTVQLRTEYDPHTHVYYTTAEPRSEISVQPVT VTQDTLSCQSPESTSSTRDLLSQFSDSSLHCLEPPCTKWTLSSFAEKHYAPFLLKPKAKV VVIFLFLGLLGVSLYGTTRVRDGLDLTDIVPRETREYDFIAAQFKYFSFYNMYIVTQKAD YPNIQHLLYDLHKSFSNVKYVMLEENRQLPKMWLHYFRDWLQGLQDAFDSDWETGKIMPN NYKNGSDDGVLAYKLLVQTGSRDKPIDISQLTKQRLVDADGIINPSAFYIYLTAWVSNDP VAYAASQANIRPHRPEWVHDKADYMPETRLRIPAAEPIEYAQFHFYLNGLRDTSDFVEAI EKVRTICNNYTSLGLSSYPNGYPFLFWEQYISLRHWLLLAISVVLACTFLVCALFLLNPW TAGIIVMVLALMTVELFGMMGLIGIKLSAVPVVILIASVGIGVEFTVHVALAFLTAIGDK NRRAVLALEHMFAPVLDGAVSTLLGVLMLAGSEFDFIVRYFFAVLAILTILGVLNGLVLL PVLLSFFGPYPEVSPANGLNRLPTPSPEPPPSVVRFAVPPSHTNNGSDSSDSEYSSQTTV SGISEELRHYEAQQGTGAPAHHVIVEATENPVFARSTVVHPESRRPPPTNPRSHPRLDSG SLPPGWQSQQPHRDPPREGSRPPPYRPRRDAFEISTEGHSGPSNRDRTGPRGPRPRNPAP TATGSSMPGYCQPITTVTASASVTVAVHPPPGPGRNPRVGPCPGYEGYPETDHGLFEDPH VPFHVRCERRDSKVEVIKLQDVDCEERPWGGSSG NT seq 3885 nt NT seq  +upstreamnt  +downstreamnt atgtttaatcctcaacttatgatccagaccccgaaagaagaaggtgccaatgtactgacc acagaagcgctcctacaacacctggactcggcactccaggccagcagagtccacgtatac atgtacaacaggcaatggaaattggaacatttgtgttataaatcaggagaacttatcaca gaaacaggttacatggatcagataatagaatatctttacccttgtttaattattaccccg ctggactgcttctgggaaggggcaaaattacagtctgggacagcatacctcctaggtaaa cctcctttgcggtggacaaactttgaccctttggaattcctagaagagttaaagaaaata aactatcaagtggacagctgggaggaaatgctgaataaggcagaagttggtcatgggtac atggaccgtccctgcctcaatccagccgatccggactgccctgccactgcccccaacaaa aattcaaccaaacctcttgatatggcccttgttttgaatggtgggtgtcacggattgtcc agaaagtatatgcactggcaggaggagttgattgtgggtggcaccgtcaagaatagcacc gggaaacttgtcagcgcccatgccctgcagaccatgttccagttaatgacgcccaagcag atgtatgagcacttcaagggctacgagtatgtctcgcacatgaactggaatgaggacaag gcggcagccatccttgaggcgtggcagaggacctacgtggaggtggttcatcagagcgtt gcccaaaactccactcaaaaggtgctctccttcaccaccaccaccctggacgacatcctc aaatccttctctgatgtcagcgtcatccgcgtggccagtggctacttgctgatgcttgcc tatgcctgtttaaccatgctgcgctgggactgctccaagtcccagggtgccgtggggctg gctggcgtcctgttggttgcgctgtcagtggctgcaggactgggcctgtgctcattgatc gggatttcctttaatgctgcgacaactcaggttttgccatttcttgctcttggtgtcggc gtggatgacgtttttctcctggcacatgcatttagtgaaacgggacagaataaaaggatc ccttttgaggacaggaccggggagtgcctcaagcgcaccggagccagcgtggcgctcacc tccatcagcaatgtcactgccttcttcatggccgcacttatccccattcccgcactgcga gctttctctctgcaggctgcagttgtggtggtcttcaattttgccatggtgctgctcatt tttcctgcaattctcagcatggatttatatcgacgtgaggacaggagattggacattttc tgctgttttacaagcccctgcgtcagcagagtgatccaggttgaacctcaggcctacaca gaggcacacggtgccatgcgctacagccccccacccccctacagcagccacagcttcgcc cacgagacacacatcaccatgcagtccacagtccaacttcgcactgagtatgacccccac acgcacgtgtactacaccaccgccgagccacgctccgagatctccgtgcagcctgtcacc gtcacccaggacactctcagctgccagagccccgagagcaccagctctaccagggacctg ctctcccagttctcagactccagcctccactgtctcgagcctccctgcactaagtggacg ctctcatcctttgctgagaagcactacgcccctttcctcctcaaacccaaagccaaggtc gtggtgatcttccttttcctgggcttgctgggggtcagcctttacgggaccacccgcgtg agagacgggctggaccttacagacattgtccctcgggaaaccagagagtatgacttcatt gctgcgcaattcaaatacttttctttctacaacatgtacatagtcacccagaaagcagac tacccgaatatccagcacttactttacgaccttcacaagagtttcagtaatgtgaagtat gtcatgttggaagaaaacagacagcttcccaaaatgtggctgcactacttcagagactgg ctgcaaggacttcaggatgcatttgacagcgactgggaaaccgggaaaatcatgcccaac aattacaaaaatggatcagatgatggggtcctcgcctacaaactcctggtgcaaaccggc agccgggataaacccatcgacatcagccagttgactaaacagcgtctggtggatgcagac ggcatcattaatcccagcgctttctacatctacctgacggcttgggtcagcaatgaccct gttgcttacgctgcctcccaggccaacatccgaccccaccggccagagtgggttcacgac aaggcagactacatgccagaaactaggctgagaatccctgctgcagaacccattgagtac gcccagttccatttctacctcaacggcctgcgagacacctccgactttgtggaagccatc gagaaagtgcggaccatctgcaacaactacacgagcttggggctttcgagctaccccaac ggctacccattcctcttctgggagcagtacatcagcctgcgccactggctgctgctggcc atcagtgtggtgctggcctgcacgttcctggtgtgcgcactcttcctgctgaacccctgg acggccgggatcattgtgatggtcttggctctgatgacggtcgagctctttggcatgatg ggcctcattgggatcaagctgagtgctgtgcctgtggtcatcttgatcgcatctgtgggc attggagtagaattcaccgttcacgtggccttggccttcctaaccgccatcggtgacaag aaccgcagggcagtgctggccctggagcacatgtttgcacctgttttggacggcgctgtg tctacgctgctcggggtactgatgcttgcagggtctgagtttgatttcattgtcaggtat ttctttgctgtcctggcgatcctcaccatcctgggtgttctcaatggactggttttgctg ccagtccttttgtctttctttggaccatatcctgaggtgtctccagcaaatggcctgaac cgactgcccaccccttcccctgagccacccccgagtgtggtccggtttgcagtacctccc agtcacacgaacaatgggtctgactcctctgactcggagtacagttctcaaacgaccgtg tcaggcatcagtgaggaacttcgtcactatgaggctcagcagggcacaggggcccctgcc caccacgtgatcgtggaagccacagaaaaccctgtcttcgctcgctccactgtggtccac cccgaatcaaggcgccccccacccacgaaccctcgatcgcatccccgcctggactcgggg tccctgccccctggatggcaaagccagcagccccacagggacccccccagagaaggctcg cggcctcctccctacagaccgcgcagagacgcttttgaaatttctactgaagggcattcc ggccccagcaacagggaccgcactggcccccgggggccccgacctcggaacccagcgccc acggccacaggcagtagcatgcctggttactgccagcccatcaccacggtgacagcttct gcttccgtgactgtggccgtgcaccccccacctggacctgggcggaaccctcgagtgggg ccctgcccaggctatgagggctaccctgagactgaccatgggctgtttgaggacccccac gtgcctttccacgttcggtgtgagaggagggactcgaaggtagaagtcataaagctgcaa gacgtggactgcgaggaaagaccctggggaggcagctccggctga

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