KEGG   Cavia porcellus (domestic guinea pig): 100729846
Entry
100729846         CDS       T07777                                 
Symbol
Polr2e
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
cpoc  Cavia porcellus (domestic guinea pig)
Pathway
cpoc03020  RNA polymerase
cpoc03420  Nucleotide excision repair
cpoc04623  Cytosolic DNA-sensing pathway
cpoc05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:cpoc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100729846 (Polr2e)
  09124 Replication and repair
   03420 Nucleotide excision repair
    100729846 (Polr2e)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    100729846 (Polr2e)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    100729846 (Polr2e)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cpoc03021]
    100729846 (Polr2e)
   03400 DNA repair and recombination proteins [BR:cpoc03400]
    100729846 (Polr2e)
Transcription machinery [BR:cpoc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     100729846 (Polr2e)
  RNA polymerase III system
   RNA polymerase III
     100729846 (Polr2e)
  RNA polymerase I system
   RNA polymerase I
     100729846 (Polr2e)
DNA repair and recombination proteins [BR:cpoc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      100729846 (Polr2e)
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C NA-iREase1
Other DBs
NCBI-GeneID: 100729846
NCBI-ProteinID: XP_003461007
Ensembl: ENSCPOG00000001542
UniProt: H0UWG3
LinkDB
Position
Unknown
AA seq 210 aa
MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTV
LVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVD
MAPKYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRENQLPRIQAGDPVA
RYFGIKRGQVVKIIRPSETAGRYITYRLVQ
NT seq 633 nt   +upstreamnt  +downstreamnt
atggacgacgaggaggagacctatcggctctggaaaatccgcaagaccatcatgcagtta
tgccacgaccggggctacctggtgacccaggatgagctggatcagaccttggaagagttc
aaagcccaatttggggacaagccaagtgaagggcgtccacggcgcactgacttgaccgtg
ctggtggcccacaacgatgatcccacagaccagatgttcgtcttcttcccagaggagccc
aaggtgggcatcaagaccatcaaggtgtactgccagcgcatgcaggaggagaacatcacc
cgcgcgctcattgtggtgcagcagggcatgacgccctccgccaagcagtctctggtggac
atggcgcccaagtacatcctggagcagttcctgcagcaggagctgctgatcaacattacc
gagcacgagctggtccctgagcacgtggtcatgaccaaggaggaggtgacagagctgctg
gcccgatataagctccgggagaaccagctgccccgcatccaggcgggcgaccctgtggcc
cgctacttcgggataaagcgaggacaggtggtgaagatcatccggcccagcgagacggcg
ggcaggtacatcacctaccggctggtgcagtag

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