Cavia porcellus (domestic guinea pig): 100730104
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Entry
100730104 CDS
T07777
Symbol
Acin1
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03013
Nucleocytoplasmic transport
cpoc03015
mRNA surveillance pathway
cpoc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100730104 (Acin1)
09122 Translation
03013 Nucleocytoplasmic transport
100730104 (Acin1)
03015 mRNA surveillance pathway
100730104 (Acin1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoc03019
]
100730104 (Acin1)
03041 Spliceosome [BR:
cpoc03041
]
100730104 (Acin1)
Messenger RNA biogenesis [BR:
cpoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100730104 (Acin1)
Spliceosome [BR:
cpoc03041
]
Complex C
Other components
EJC/TREX
100730104 (Acin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
SAP
RRM_1
Motif
Other DBs
NCBI-GeneID:
100730104
NCBI-ProteinID:
XP_003474543
Ensembl:
ENSCPOG00000027234
LinkDB
All DBs
Position
Unknown
AA seq
1290 aa
AA seq
DB search
MPEAVGTDPSTSRKMAELEEVTLDGKPLQALRVTDLKAALEQRGLAKSGQKSTLVKRLKG
ALMLENLQKHSTPHAAFQPNSQIGEEMSNNSFIKQYLEKQQELLRQRLEREAREAAELEE
ASAESEDEMIHPEGVASLLPPDFQSSLERPELELSRHSPRKGSSVSEEKGESDDEKPRKG
ERRSSRVRQARAAKLSEYSQAAEEEEDQETPSRNLRVRADRNLKTEEEEEEEEDEEEEEE
EEDEGQKSREAPVLKQFKEQGEEMSRTKPEEVMDERPKAIVSQEQERLERGGRVTRSQEE
ARRSQLARQQQEKDLQTVSALEEKEREIKFSQGLVKKSQSPSPPRLTEDLGKAALVPQPE
QAASEEETPPPLLTKEASSPPPHTQLQSEEEIEPTEGPAPPVLMQLSPPSANAETKEHNV
QLVGGLSPLSSPVDTKAESPAEKVSEESVLPLVEKNTSGEYSTPKGHATESEKSTQPFPL
KMEELTPAKGITDESLKQQCLEQKEGRRASHSLFPSHKLKQSADSFSSRSSSSSSSSSRS
RSRSPDSSGSQSYSPPRSKQRAVSQTHVHTNPHARPQPDSRSTSESRSRSRSRSRSASSS
SRKSLSPGVSRDSNTSYTETKDPISGQEVAGPPVPQLQVFEPQQRTPTSSSSIEGRHLNQ
PEPAEKHVTQRVQPERGSPKKCEAEEAEPPAATQPQTSDTQTSHLPESERIHHTVEEKEE
VTMDTSENRPENEVPEPPMPVADQVSNDDRPEGNAEDEEKKESSLPKSFKRKISVVSATK
GVPAGNSDTEGGQPGRKRRWGASTATTQKKPSISITTESLKSLIPDIKPLAGQEAVVDLH
ADDSRISEDETERNGDDGTHDKGLKICRTVTQVVPAEGQENGQREEEEEEKEPEAESAVP
PQVSVEVALPPPVEHEVKKVTLGDTLTRRSISQQKSGVSITIDDPVRISQVPSPPRGKIS
NIVHISNLVRPFTLGQLKELLGRTGTLVEEAFWIDKIKSHCFVTYSTVEEAVATRTALHG
VKWPQSNPKFLCADYAEQDELDYHRGLLVDRPSETKTEEQGIPRPLHPPPPPPVQPPQHT
RTEQREQERTVREQWAEREREMERRERTRAEREWDRDKVREGPRSRSRSRDRRRKERAKS
KEKKSEKKEKAQEEPPAKLLDDLFRKTKAAPCIYWLPLTDSQIVQKEAERAERAKEREKR
RKEQEEEEQKEREKEAERERNRQLEREKRREHSRERDRERERDRERDRGDRDRDRERDRD
RGRERDRRDTKRHSRSRSRSTPVRDRGGRR
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaagccgtcgggacggacccgagtacctcacgcaagatggcggagctggaggag
gtgactctggacgggaagcctcttcaggcgctaagggtgaccgacctgaaggctgcactg
gagcagcgaggcctagccaagagcgggcagaagagcaccctggtcaagcggctcaaaggg
gctctaatgctagaaaatttacagaaacactcaacaccccatgctgcattccagccaaat
tcccagattggtgaggaaatgagcaacaacagtttcataaagcagtatctggaaaagcaa
caggagctacttcggcagcgtctggaacgggaagctcgagaagctgcagaacttgaagaa
gcttcagctgagtcggaggacgagatgatccatccagagggagtggcttccctgctgcct
cctgactttcagagtagcctggagagaccagagctggagctcagcagacattcgcccaga
aaaggctcctctgtttctgaagaaaaaggtgaatctgatgatgaaaagccaaggaaagga
gaaagacgatcatccagggtcagacaggcaagggcagctaagctatctgagtacagtcag
gctgctgaagaggaagaggatcaagaaacaccttccagaaatctgagggttagagcagat
cgaaatctgaaaacagaagaggaagaggaagaagaagaagacgaagaagaagaagaggag
gaagaagatgaaggacaaaaatctagggaggctccagttctaaaacagtttaaagaacag
ggggaagaaatgtccagaacaaaaccagaggaggtgatggatgagagacccaaagccata
gtatcccaggaacaggagaggttagaaagaggagggcgagtcacaagatcccaggaagag
gccagaagaagtcaactggccagacagcagcaagagaaagatttgcaaacagtttctgcc
cttgaggagaaagaaagagaaataaaattttcacaaggcttggtgaaaaaatcacagtcc
ccttccccccctcgattgactgaagatctaggaaaggctgctcttgtgccacagccagag
caagctgccagcgaagaggagactcccccaccattgcttaccaaggaagcatcctctcca
ccacctcatacacagctacagagtgaggaagaaatagagcccacagaaggtccggctcct
cctgtcctcatgcagttatcgccaccaagtgctaatgctgaaactaaggagcacaacgtc
cagttggtgggaggcctgtctcctttgtccagtcctgtagacaccaaagcagagtctcca
gcagagaaagtgtcagaggagagtgtcctgcccctggttgagaaaaacacatcgggggaa
tattcaaccccaaaaggtcatgcaactgagtcagaaaaatccactcagccattccctcta
aaaatggaagaactaacaccagccaaagggatcactgatgaatctctgaaacagcagtgt
ttggaacagaaggaaggccgaagggcctcacattctctttttccaagccacaagttaaaa
cagtcagctgactcattctccagccggtcctcctcatcttcatcctccagttctagatcc
agatctcgctctcctgacagttcgggttctcagtcttattcacctccaagatccaagcag
agagcagtgtcccagacacatgtccacactaaccctcatgctagacctcagccagactct
aggtccacatcagagtccaggtcccggtcccggtcccggtcccgttctgcatctagcagt
agcaggaaatctctgagccctggagtctccagggacagcaacaccagctacactgaaacc
aaagatcccatttctggtcaagaggttgcaggtccaccagtgccacagctgcaggtcttt
gagccacagcaaaggacaccaacctcctcatcctctatcgaagggaggcatctgaaccag
cctgagccagccgaaaaacatgtgacccagagggtgcaacccgagcggggaagcccaaag
aagtgtgaagctgaagaggcagagccaccagctgccacacagcctcaaacctcagacact
cagacttcccatctaccagaatcagaaaggattcatcacactgttgaggagaaggaggaa
gtgactatggacacaagtgaaaacagacctgaaaatgaggttccagagcctcctatgcct
gttgccgaccaagtcagcaatgatgaccgtccagagggcaatgctgaagatgaggagaag
aaagagagctcgctgcccaaatcattcaagaggaagatctccgttgtctcagctaccaag
ggggtgccagccggaaacagtgacacagaggggggccagcctggtcggaagcgacgttgg
ggagccagcacagccaccacacagaagaaaccctccatcagtatcaccactgaatcactc
aagagcctcatccccgacatcaaacccctggcggggcaggaggctgttgtggatctgcat
gctgatgactcccgcatctctgaggatgagacagagcgtaatggcgacgacgggacccat
gacaaagggctgaaaatatgccggacagtcactcaggtggtacctgcagagggccaggag
aatgggcagagggaggaagaggaagaagaaaaggagcctgaagcggaatctgctgtacct
ccccaggtgtcagtggaagtggcattgcccccacctgtggaacacgaagtaaagaaagtg
acattaggagataccttaactcgtcggtccattagccagcagaagtctggagtttccatt
acaattgatgacccagtccgaatttcccaggttccctccccaccccggggcaagatcagt
aacattgttcatatctccaatttggttcgtcccttcactttaggccaactcaaggagttg
ctggggcgtacaggaacgttggtggaagaggccttctggattgataagatcaaatctcac
tgctttgtaacgtactcaacagtagaggaagctgttgccacccgcacagctctgcacggg
gtcaaatggccccaatccaaccccaaattcctttgtgccgactatgctgagcaagatgag
ctggactatcatcgtggcctcttggtggaccgcccctctgaaactaagacagaggagcag
ggaataccacggcccctgcaccccccgcccccgcccccagtccagccaccacagcacact
cggacagagcagcgggaacaggagaggacagtgcgtgagcagtgggcagaacgggaacgg
gagatggagcggcgggagcgaactcgagctgagcgagaatgggatcgagacaaagttcga
gaagggccacgatcccgctcacggtcccgtgaccgccgccgcaaagaacgtgcaaagtct
aaagaaaagaagagtgagaagaaagagaaagcccaagaggagccacctgccaagctgctg
gacgacctcttccggaagaccaaggccgctccctgcatctactggctcccgctgacagac
agccaaattgtccagaaggaggctgagcgggctgagcgggccaaggagcgggagaagcgg
cgaaaggaacaggaagaagaagagcagaaggaacgtgagaaggaagctgagcgggaacgg
aaccgacagctggagcgagagaaacgacgagagcacagccgagagagggacagggagaga
gagagggacagggaacgagacaggggggaccgagatcgtgacagggaaagggaccgggac
cggggtagggagagggatcgcagagacaccaagcgccacagcagaagccgaagtcggagc
acacctgtgcgggaccggggtggccgccgctag
DBGET
integrated database retrieval system
