Cavia porcellus (domestic guinea pig): 100730554
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Entry
100730554 CDS
T07777
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpoc04515
]
100730554
Cell adhesion molecules [BR:
cpoc04515
]
Immunoglobulin superfamily
DSCAM family
100730554
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
ig
Ig_2
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
Ig_6
V-set_CD47
Receptor_2B4
Interfer-bind
fn3_2
ChitinaseA_N
Motif
Other DBs
NCBI-GeneID:
100730554
NCBI-ProteinID:
XP_023422011
Ensembl:
ENSCPOG00000014040
LinkDB
All DBs
Position
Unknown
AA seq
1833 aa
AA seq
DB search
MDKVHYRENENRFFITHHGGLYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVTDP
TESIPTILDGFHSQEVWAGHTVELPCTASGYPIPAIRWLKDGRPLPADSRWTKRITGLTI
SDLRAEDSGSYICEVTNTFGSAEATGILTVIDPLHVTLTPKKLKTGIGSTVILSCALTGS
PEFIIRWYRNTELVLPDEAISIRGLSNETLLITSAQKSHSGAYQCFATRKAQTAQDFAII
VLEDGTPRIVSSFSEKVVNPGEQFSLMCAAKGAPPPTVTWALDDEPIVRDGSHRTNQYTM
SDGTTISHMNVTGPQIRDGGVYRCSARNSVGSAEYQARINVRGPPSIRAMKNITAVAGRD
TLINCRVIGYPYYSIKWYKDALLLPDNHRQVVFENGTLKLTDVQKGMDEGEYLCSVLIQP
QLSISQSVHVAVKVPPLIQPFEFPPASIGQLLYIPCVVSSGDMPIRITWRKDGQVIISGS
GVTIESKEFMSSLQISSVSLKHNGNYTCIASNAAATVSRERQLIVRVPPRFVVQPNNQDG
IYGKAGVLNCSVDGYPPPKVMWKHAKVPAMITSHPNTTIAIKGQAKELNCTARGERPIII
RWEKGDMVIDPDRVMRYAIATKDNGDEVVSTLKLKPADRGDSVFFSCHAINSYGEDRGLI
QLTVQEPPDPPELEIREVKARSMNLRWTQRFDGNSIITGFDIEYKNKSDSWDFKQSTRNI
SPTINQANIVDLHPASVYSIRMYSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPMTS
QSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFA
QYGVVVQAFNRAGTGPSSSEINATTLEDVPSQPPENVRALSITSDVAVISWSEPPRSTLN
GVLKGYRVIFWSLYVDGEWGEMQNITTTRERVELRGMEKFTNYSVQVLAYTQAGDGVRSS
VLYIQTKEDVPGPPAGIKAVPSSASSVVVSWLPPTKPNGVIRKYTIFCSSPGSGQPAPSE
YETSPEQLFYRIAHLNRGQQYLLWVAAVTSAGRGNSSEKVTIEPAGKAPAKIISFGGTVT
TPWMKDVRLPCNSVGDPAPTVKWTKDSEDSAIPVSMDGHRLIHTNGTLLLRAVKAEDSGY
YTCTATNTGGFDTIIVNLLVQVPPDQPRLTVSKTSASSITLTWIPGDNGGSSIRGFVLQY
SVDNSEEWKDVFISSSERSFKLDSLKCGTWYKVKLAAKNSVGSGRISEIIEAKTHGREPS
FSKDQHLFTHINSTHARLNLQGWNNGGCPITAIVLEYRPKGTWAWQGLRANNSAEVFLTE
LREATWYELRMRACNSAGCGNETAQFATLDYDGSTIPPIKSAQGEGDDVKKLFTIGCPVI
LATLGVALLFIVRKKRKEKRLKRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIP
RVQLLIEDKEGIKQIGDDKATIPVTDAEFSQAVNPQSFCTGVSLHHPALIQSSGPLIDMS
DIRPGTNPVSRKNVKSAHSTRNRYSSQWTLTKCQASTPARTLTSDWRTVGSQHGVTVTES
DSYSASLSQDTDKGRNSMVSTESASSTYEELARAYEHAKLEEQLQHAKFEITECFISDSS
SDQMTTGTNENADSMTSMSTPSEPGICRFTASPPKPQDADRGKNVAVPIPHRANKSDYCN
LPLYPKTEAFFRKAEGREPCPVVPPREASIRNLARTYHPQARHLTLDPASKPLGLPHPGA
PAAAATATLPQRTLAMPAPPAGTAPPAPGPTPAEPPAAPSTAPPAPSTEPPRAGGPHTKM
GGSRDSLLEMSTSGVGRSQKQGAGAYSKSYTLV
NT seq
5502 nt
NT seq
+upstream
nt +downstream
nt
atggacaaggtccattacagggagaacgaaaacaggttttttattacccaccacggcggg
ctgtacatctcagacgtgcagaaagaggacgccctctccacctaccgctgcatcacgaag
cacaaatacagcggggagacccggcagagcaacggagcccgcctctctgtgacagacccc
accgagtccatccccaccatcctggatggcttccactcccaggaagtgtgggctggccac
acagtggagctgccctgcactgcctcgggctaccccatccctgccatccgctggctcaag
gatggccggcccctcccagccgacagccgctggaccaagcgcatcacagggctgaccatc
agtgaccttcgggctgaggacagtggcagctacatctgtgaagtcactaacacctttggt
tcagcagaggccacaggcatcctcacggtcatcgaccccctccacgtgaccttgacacca
aagaagctgaagaccggcataggcagcacggtcatcctctcctgcgccctcacgggctcc
ccggagttcatcatccgctggtaccggaacaccgagctggtgctgcctgacgaggccatc
tccatccgcgggctcagcaacgagacgctgctcatcacctcggcccagaagagccactct
ggggcctaccagtgcttcgccacccgcaaggcccagacggcccaggactttgccatcatt
gtgctcgaggacggcacgccccgcatcgtctcctccttcagcgagaaggtggtcaacccc
ggggagcagttctcactgatgtgtgccgccaagggcgccccgccccccacggtcacctgg
gccctggacgacgagcccatcgtgcgggacggaagccaccgcaccaaccagtacaccatg
tccgacggcaccaccatcagccacatgaacgtcacgggcccccagatccgcgacgggggc
gtgtaccggtgctcggcgcggaactcggtgggcagtgctgaatatcaggcgcgaataaac
gtaagaggcccccccagcatccgggcaatgaagaacatcacagcagtcgctgggcgggac
accctcatcaactgcagggtcattggctacccctactactccatcaagtggtacaaggat
gccctcctgctgcctgacaaccaccgccaggtggtgtttgagaacgggaccctcaagctg
accgacgtacagaaaggcatggacgagggggagtacctgtgcagtgtcctcatccagccc
cagctctccatcagccagagcgtccatgtggctgttaaagtgccccctctaatccagccc
ttcgagttcccacccgcctccattggccagctgctctatatcccctgcgtggtgtcttcg
ggggacatgcccatccgcatcacctggaggaaggatggacaggtgatcatctcaggctcg
ggcgtgaccatcgagagcaaggagttcatgagttctctgcagatctccagcgtctccctc
aagcacaacggcaactacacctgcatcgccagcaacgccgcagccaccgtgagcagggag
cgccagctcatcgtgcgtgtgccccctcgatttgtggtgcagcccaacaaccaggacggc
atctatggcaaagctggtgtgcttaactgctcggtggatggctaccccccacccaaggtc
atgtggaagcatgccaaggtcccggccatgatcacctcccaccccaacaccaccatcgcc
atcaagggccaggccaaggagctgaactgcacggcccgaggagagcggcccatcatcatc
cgctgggagaagggagacatggtcatcgaccccgacagagtcatgagatatgccatcgca
accaaggacaacggtgacgaggttgtttctaccttgaagctgaagccagctgaccgcggg
gactctgtgttcttcagctgccacgctatcaactcgtacggggaggaccggggcctaatc
cagctcactgtgcaagaacctcctgaccccccagagctagagatccgggaggtgaaggcc
cggagcatgaacctgcgctggacccagagattcgatgggaacagcatcatcacaggcttt
gacatcgagtacaagaacaaatcagactcctgggacttcaagcagtccacacgtaacatc
tcccccaccatcaatcaggccaacatcgtggacttgcacccagcttccgtatacagcatc
cgcatgtactccttcaacaagatcggtcgcagtgagccaagcaaagagctcaccatcagc
acagaggaggctgctcctgatggaccccccatggatgtcacgttgcagccaatgacctca
cagagcatccaagtgacttggaaggcacccaagaaggagctgcagaacggtgtcatccgg
ggctatcagattggctacagagaaaacagtcctggcagcaacgggcagtacagcatcgtg
gagatgaaggccaccggggacagcgaggtctacactctggacaacctcaagaagtttgcc
cagtatggcgtggtggtccaggctttcaatcgggctgggacagggccctcctccagcgag
atcaatgctaccacactggaggacgtgcccagccagccccctgaaaatgtccgggccctg
tctatcacttctgacgtagccgtcatctcctggtcagagcccccgcgcagcactctcaac
ggcgtcctcaaaggctatcgggtcatcttctggtcactctacgtggatggggagtggggc
gagatgcagaacatcaccacgacgcgagagcgggtggagctgcggggcatggagaagttc
accaactacagcgtgcaggtgctggcctacacgcaggctggggacggcgtgcgcagcagt
gtgctctacatccagaccaaggaggatgttccaggtccccctgcaggcatcaaagctgtc
ccctcatcagctagtagcgtggtcgtgtcttggcttcctcccaccaagcccaatggagtg
atccgcaaatacaccatcttctgctccagccctggatctggccagccggcgcctagcgag
tacgagaccagtcccgagcagctcttctaccggattgcccacctgaaccgcgggcagcag
tacctgctgtgggtggcagccgtcacctccgctggccggggcaacagcagcgagaaagtc
accatcgagcccgccggcaaggccccagcgaagatcatctcatttgggggcaccgtgacg
acaccctggatgaaggatgtccggctgccgtgcaattctgtgggagacccagcccccacc
gtgaagtggaccaaagacagcgaggactcagcaatccccgtgtccatggacggccaccgg
ctcatccacaccaacggcaccctgctgctgcgcgccgtgaaggctgaggactcaggctac
tacacctgcacggccaccaacaccggtggcttcgacaccatcatcgtcaacctcctggtg
caagtgcccccggaccagccccggctcacggtctccaaaacctccgcttcgtccatcact
ctgacctggattccaggcgacaatgggggcagctccatccgaggttttgtgctacagtac
tcagtggacaacagcgaggagtggaaggacgtgttcatcagctccagcgagcggtccttc
aagctggacagcctcaagtgtggcacgtggtacaaggtgaagctggccgccaagaacagt
gtgggctccgggcgaatcagcgagatcatcgaggccaagacgcacgggcgggagccctcc
ttcagcaaagaccagcacctcttcacccacatcaactccacgcatgctcggcttaacctg
cagggctggaacaacgggggctgccccatcacagccatcgtgctggagtaccggcccaaa
gggacctgggcctggcagggcctccgggccaacaactcggcagaggtgtttctgactgag
ctgcgagaggccacgtggtatgaactgcgcatgagggcttgcaacagcgccggctgcggc
aacgagaccgcccagttcgccaccctggactacgatggcagcaccatcccacccatcaag
tctgcccaaggggaaggggatgacgtgaagaagctgttcaccattggctgcccagtcatc
ctggccactctcggggtggcactgctcttcatcgtgcgcaagaagaggaaggagaagcgg
ctgaagcggctccgagatgcaaagagtttggcagaaatgttgataagcaagaataaccga
agctttgacacgcctgtcaaagggccaccccagggcccccggctgcacattgacatcccc
agggtccagctgctcatcgaggacaaggaaggcatcaagcagattggagatgacaaggcc
accatccctgtgacagatgctgagttcagtcaagccgtcaacccacagagcttctgtacc
ggtgtctctttgcatcaccccgccctcatccagagctcgggccccctcattgatatgtct
gacatccgcccaggaaccaatccagtgtccaggaagaacgtaaagtcagcccacagcacc
cggaaccggtactcaagccagtggaccctgacaaagtgccaggcctccacccctgcccgc
accctcacctccgactggcgcacagtgggctcccagcatggtgtcacggtcacggagagt
gacagctacagtgccagcctgtcccaggacacagacaaaggacggaacagcatggtgtcc
accgagagtgcctcttccacctacgaggagctggcccgggcctatgagcacgccaagctg
gaggagcagctgcagcacgccaaattcgagatcactgagtgctttatctcagacagttcc
tctgaccagatgaccacgggcaccaatgagaatgccgacagcatgacgtccatgagcaca
ccctcagagcccggcatctgccgatttactgcctcccctcccaagccccaggatgccgat
cggggcaaaaatgtggctgtgcccatccctcaccgagccaataagagtgactactgcaat
ctgcccctgtaccccaagacggaggccttcttccggaaagcagaagggcgtgagccctgt
cctgtggtcccaccccgagaggcctccatccggaacctggctcgaacctaccacccccag
gcccgccacctgaccctggaccctgccagcaagcccttgggcctcccacacccaggggcc
cccgctgccgccgccacagccaccttacctcagaggactctggccatgccagcaccccca
gcgggcacggcccccccagcgcccgggcccacccccgccgagccccccgcggcccccagc
actgccccaccagcccccagcactgagcctcctcgggccgggggtccgcacaccaaaatg
gggggctctagggactcactcctcgagatgagcacatcgggggtagggcggtctcagaag
cagggtgccggggcctactccaaatcctacaccctagtgtag
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integrated database retrieval system
