Cavia porcellus (domestic guinea pig): 100730979
Help
Entry
100730979 CDS
T07777
Symbol
Ctcfl
Name
(RefSeq) transcriptional repressor CTCFL
KO
K23195
transcriptional repressor CTCF
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpoc03000
]
100730979 (Ctcfl)
03036 Chromosome and associated proteins [BR:
cpoc03036
]
100730979 (Ctcfl)
Transcription factors [BR:
cpoc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
100730979 (Ctcfl)
Chromosome and associated proteins [BR:
cpoc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100730979 (Ctcfl)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-H2C2_5
zf-C2H2_16
zf-C2H2_jaz
Zf-C2H2_ZNF451_C
zf-C2H2_15
zf-C2H2_REST
Zn_ribbon_8
zf-C2H2_7th_ZNF462
zf-AtTam37
DUF7479
zf-met
DUF7129
Motif
Other DBs
NCBI-GeneID:
100730979
NCBI-ProteinID:
XP_013001091
LinkDB
All DBs
Position
Unknown
AA seq
642 aa
AA seq
DB search
MAAPELSDPSEQFTSIKELSVTLEKELEEVDRVPRVQALQSAGEPEPTGNHELLQALLLE
GRLELVATPAEDDKHILSLRAVPSPSGDPGLLSTGWLDTEHVQELQVAEGVLPLLWLGEE
PQQSLQPCVALGLQEELSPLQELEVMKVRVLEESQAVVRGDPEPAPNLSENSGLTKIEKV
PEEDQPAAAEGGGAQRAGEQFLLLAVRPGDEGSDGIVLAVCTLNEEEQEEKPAVGQANRE
TTSSTKSPRKAKGAKPTFRCSVCTFTASRVSSFNRHMRIHSSEKPHMCHICLKTFRTVTL
LRNHINTHTGTRPYKCVDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCTYASVEASKLKR
HVRSHTGERPFQCLLCSYASKDTYKLKRHMRTHSGEKPYECQVCHARFTQRGTMKIHILQ
KHSENVPKYECPHCAAVIARKSDLRVHVRNLHTYRATEMQCRYCPATFHERYTLVQHQKT
HKNEKRFKCPHCSYACKQERHLVVHVRTHTGEKPFTCSTCHKHFRQKPLLDAHFKKYHDA
DFTPSVYECPTCGRGFSRWSSMHRHAEKCGSARGTSAASGRGKRTRKGKQRAPRGAGQDE
APLEETQIVGEAAPDDGGEAAGGSVALEEDLTCEMIFDMMVQ
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccccgagctctctgacccctctgagcagttcaccagcatcaaagagctgagt
gtgaccctggagaaagagctggaggaggtagacagagtcccgagagtacaggccctgcag
agcgccggggagcctgagcccacaggcaaccatgagctgctgcaggccctgctgttggaa
gggaggctggagctggtagcgaccccggcggaggatgacaagcacattctgtccctgcga
gccgtgccctcgccctccggagacccggggctgctgagcacaggctggctggacacagag
cacgtgcaggagctgcaggtggccgagggtgtgctcccgctgttgtggctgggcgaggag
ccccagcagagcttgcagccgtgcgtggccctaggtctccaggaggagctgtctccgctg
caggagctggaggtgatgaaggtccgcgtgctggaggagagccaggcggtggtcagggga
gaccctgagccagcgccaaacctttctgaaaactcaggattgacaaagattgagaaagtt
ccggaggaggaccagccagcggcggctgaaggaggcggagctcagagagccggggagcag
tttttgctcctggcggtgaggcccggagatgaaggaagtgatggaattgttctggccgtt
tgcaccttaaacgaggaagaacaggaagaaaaacctgcagtaggtcaagcaaatagggaa
acaaccagctccacaaaaagtccaagaaaagcaaagggagcgaagccgaccttccgctgc
agcgtctgcacgttcacggcttctagagtctccagctttaaccgccacatgaggatccac
agcagcgagaagccccacatgtgccacatctgcctgaagacgttccgcaccgtcacgctc
ctccggaaccacatcaacacccacacaggaaccaggccttacaagtgtgtggactgtgat
atggcatttgtcaccagtggagaactcgtccggcacaggcgttacaaacacactcacgag
aagccatttaaatgctccatgtgcacgtacgcaagtgtggaagccagcaagctgaagcgc
cacgtccgctcgcacacgggcgagcggcccttccagtgcctgctctgcagctacgccagc
aaggacacctacaaactcaagcgtcacatgcgcacccactcaggggagaagccatatgag
tgccaggtctgccacgcccgcttcacccagcgcgggaccatgaagatacacatcctccag
aagcacagcgagaacgtgcccaagtacgagtgtccccactgtgccgccgtcatcgcgagg
aagagcgacctgcgtgtgcacgtgcgcaacctgcacacctaccgcgccacggagatgcag
tgccgctactgcccggccaccttccacgagcgctacaccctcgtgcagcaccagaagacc
cacaagaacgagaagcggttcaagtgcccgcactgcagctacgcctgcaagcaggagcgg
cacctcgtggtccacgtccgcacccacaccggagagaagcccttcacctgctccacctgc
cacaagcacttccgccagaagccgcttctggacgcgcatttcaagaaataccacgatgcg
gatttcaccccctctgtctatgagtgccccacgtgtggcaggggcttctctcgctggagc
agcatgcacagacatgcggagaagtgtggctcggcacgtgggacctcagctgcctcagga
agaggaaagcgcacgagaaaggggaagcagagagccccccgaggagccggacaggatgag
gcccccttggaggagacacagattgtgggcgaggcggcccccgatgacggcggggaagcg
gcaggcggaagcgtggccctggaggaagacctgacgtgcgagatgatcttcgatatgatg
gtgcagtga
DBGET
integrated database retrieval system