KEGG   Cavia porcellus (domestic guinea pig): 100730979
Entry
100730979         CDS       T07777                                 
Symbol
Ctcfl
Name
(RefSeq) transcriptional repressor CTCFL
  KO
K23195  transcriptional repressor CTCF
Organism
cpoc  Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:cpoc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cpoc03000]
    100730979 (Ctcfl)
   03036 Chromosome and associated proteins [BR:cpoc03036]
    100730979 (Ctcfl)
Transcription factors [BR:cpoc03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    100730979 (Ctcfl)
Chromosome and associated proteins [BR:cpoc03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    100730979 (Ctcfl)
SSDB
Motif
Pfam: zf-H2C2_2 zf-C2H2 zf-C2H2_4 zf-H2C2_5 zf-C2H2_16 zf-C2H2_jaz Zf-C2H2_ZNF451_C zf-C2H2_15 zf-C2H2_REST Zn_ribbon_8 zf-C2H2_7th_ZNF462 zf-AtTam37 DUF7479 zf-met DUF7129
Other DBs
NCBI-GeneID: 100730979
NCBI-ProteinID: XP_013001091
LinkDB
Position
Unknown
AA seq 642 aa
MAAPELSDPSEQFTSIKELSVTLEKELEEVDRVPRVQALQSAGEPEPTGNHELLQALLLE
GRLELVATPAEDDKHILSLRAVPSPSGDPGLLSTGWLDTEHVQELQVAEGVLPLLWLGEE
PQQSLQPCVALGLQEELSPLQELEVMKVRVLEESQAVVRGDPEPAPNLSENSGLTKIEKV
PEEDQPAAAEGGGAQRAGEQFLLLAVRPGDEGSDGIVLAVCTLNEEEQEEKPAVGQANRE
TTSSTKSPRKAKGAKPTFRCSVCTFTASRVSSFNRHMRIHSSEKPHMCHICLKTFRTVTL
LRNHINTHTGTRPYKCVDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCTYASVEASKLKR
HVRSHTGERPFQCLLCSYASKDTYKLKRHMRTHSGEKPYECQVCHARFTQRGTMKIHILQ
KHSENVPKYECPHCAAVIARKSDLRVHVRNLHTYRATEMQCRYCPATFHERYTLVQHQKT
HKNEKRFKCPHCSYACKQERHLVVHVRTHTGEKPFTCSTCHKHFRQKPLLDAHFKKYHDA
DFTPSVYECPTCGRGFSRWSSMHRHAEKCGSARGTSAASGRGKRTRKGKQRAPRGAGQDE
APLEETQIVGEAAPDDGGEAAGGSVALEEDLTCEMIFDMMVQ
NT seq 1929 nt   +upstreamnt  +downstreamnt
atggcggcccccgagctctctgacccctctgagcagttcaccagcatcaaagagctgagt
gtgaccctggagaaagagctggaggaggtagacagagtcccgagagtacaggccctgcag
agcgccggggagcctgagcccacaggcaaccatgagctgctgcaggccctgctgttggaa
gggaggctggagctggtagcgaccccggcggaggatgacaagcacattctgtccctgcga
gccgtgccctcgccctccggagacccggggctgctgagcacaggctggctggacacagag
cacgtgcaggagctgcaggtggccgagggtgtgctcccgctgttgtggctgggcgaggag
ccccagcagagcttgcagccgtgcgtggccctaggtctccaggaggagctgtctccgctg
caggagctggaggtgatgaaggtccgcgtgctggaggagagccaggcggtggtcagggga
gaccctgagccagcgccaaacctttctgaaaactcaggattgacaaagattgagaaagtt
ccggaggaggaccagccagcggcggctgaaggaggcggagctcagagagccggggagcag
tttttgctcctggcggtgaggcccggagatgaaggaagtgatggaattgttctggccgtt
tgcaccttaaacgaggaagaacaggaagaaaaacctgcagtaggtcaagcaaatagggaa
acaaccagctccacaaaaagtccaagaaaagcaaagggagcgaagccgaccttccgctgc
agcgtctgcacgttcacggcttctagagtctccagctttaaccgccacatgaggatccac
agcagcgagaagccccacatgtgccacatctgcctgaagacgttccgcaccgtcacgctc
ctccggaaccacatcaacacccacacaggaaccaggccttacaagtgtgtggactgtgat
atggcatttgtcaccagtggagaactcgtccggcacaggcgttacaaacacactcacgag
aagccatttaaatgctccatgtgcacgtacgcaagtgtggaagccagcaagctgaagcgc
cacgtccgctcgcacacgggcgagcggcccttccagtgcctgctctgcagctacgccagc
aaggacacctacaaactcaagcgtcacatgcgcacccactcaggggagaagccatatgag
tgccaggtctgccacgcccgcttcacccagcgcgggaccatgaagatacacatcctccag
aagcacagcgagaacgtgcccaagtacgagtgtccccactgtgccgccgtcatcgcgagg
aagagcgacctgcgtgtgcacgtgcgcaacctgcacacctaccgcgccacggagatgcag
tgccgctactgcccggccaccttccacgagcgctacaccctcgtgcagcaccagaagacc
cacaagaacgagaagcggttcaagtgcccgcactgcagctacgcctgcaagcaggagcgg
cacctcgtggtccacgtccgcacccacaccggagagaagcccttcacctgctccacctgc
cacaagcacttccgccagaagccgcttctggacgcgcatttcaagaaataccacgatgcg
gatttcaccccctctgtctatgagtgccccacgtgtggcaggggcttctctcgctggagc
agcatgcacagacatgcggagaagtgtggctcggcacgtgggacctcagctgcctcagga
agaggaaagcgcacgagaaaggggaagcagagagccccccgaggagccggacaggatgag
gcccccttggaggagacacagattgtgggcgaggcggcccccgatgacggcggggaagcg
gcaggcggaagcgtggccctggaggaagacctgacgtgcgagatgatcttcgatatgatg
gtgcagtga

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