Cavia porcellus (domestic guinea pig): 100731023
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Entry
100731023 CDS
T07777
Symbol
Polr2b
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03020
RNA polymerase
cpoc03420
Nucleotide excision repair
cpoc05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100731023 (Polr2b)
09124 Replication and repair
03420 Nucleotide excision repair
100731023 (Polr2b)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
100731023 (Polr2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpoc03021
]
100731023 (Polr2b)
03400 DNA repair and recombination proteins [BR:
cpoc03400
]
100731023 (Polr2b)
Enzymes [BR:
cpoc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
100731023 (Polr2b)
Transcription machinery [BR:
cpoc03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
100731023 (Polr2b)
DNA repair and recombination proteins [BR:
cpoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
100731023 (Polr2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
100731023
NCBI-ProteinID:
XP_003471727
Ensembl:
ENSCPOG00000013006
UniProt:
A0A286XIQ9
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKEVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacgcagacgaagatatgcaatatgatgaggatgatgatgagatcaccccagat
ctgtggcaagaagcctgctggattgtaatcagttcctattttgacgaaaaaggcttggtt
agacaacagctggattcttttgatgagtttattcagatgtctgttcagagaattgtggaa
gatgctccccctatcgacctgcaagctgaagcccaacacgctagtggagaagtggaggaa
ccgccaagatacctgctgaagttcgaacagatttacctctccaagcccacccattgggaa
agagatggtgctccttcacccatgatgcccaatgaggccagattaagaaatctcacgtat
tctgctccactttatgttgatataaccaaaacagtcattaaagaaggggaggaacagctt
cagacacaacatcagaaaactttcataggaaaaattccgattatgttgcgttcaacttac
tgtctattgaatggcttaacagatcgtgatctttgcgagttaaatgaatgccccttggat
ccggggggctacttcattattaatggatcagaaaaggttctgattgctcaagagaaaatg
gcaacaaacacagtctatgtgtttgccaaaaaggattctaaatatgcctacacaggagaa
tgtcggtcctgtctggagaattcttctcgacccaccagtaccatatgggtcagcatgctg
gcaaggggaggacagggtgcaaaaaagagtgctattggccaacgcattgtggcaacccta
ccgtacatcaaacaagaagttcccatcattattgtgttcagagcactaggctttgtgtct
gatagagatatcttagaacacattatttatgattttgaagatccagagatgatggaaatg
gttaaaccttctctggatgaagcctttgttatccaggaacagaatgttgctttaaatttt
attggctcacgaggggcaaagcctggtgttactaaggagaaaagaattaaatatgcaaaa
gaagtcttacaaaaagaaatgctccctcatgttggtgtcagtgatttttgtgagaccaaa
aaagcctatttcttggggtatatggttcatagactacttctagcagctttgggtaggaga
gaactagatgacagagatcactatggaaacaaaagattggatcttgctgggccgctgctt
gcattcttatttagaggtatgtttaagaatttgctgaaagaagtgcgaatctatgcacag
aagtttattgatcgaggaaaggactttaacttggagttggcaattaaaacaaggataata
tctgatggcctaaagtactccttagctacgggaaactggggtgaccaaaaaaaagctcac
caagccagggctggagtgtctcaggtgttaaatcgccttacttttgcatcaactctttct
cacctgcgtcgtttaaattctcctattggtagagatggcaagctggccaaaccgcggcag
ctacataacacattgtggggaatggtgtgtcctgccgagaccccagaggggcatgcggtt
ggacttgtgaagaatttagccctgatggcttacatttcagttggatctcagccatctcca
attctggaatttttagaagagtggagtatggaaaatttagaagaaatttctcctgcagct
attgctgatgcaaccaagatttttgttaatggctgttgggttggaatacataaagatcct
gaacaacttatgaacaccctacggaaactgcggcggcagatggacatcattgtgtctgaa
gtttctatgatcagagatattcgagagagagagattcggatctacacagatgcgggccgt
atttgtaggccacttctcattgtggagaaacaaaagctgcttttgaagaagagacatatc
gaccaattgaaagagagagaatataacaactacagctggcaggaccttgtggccagtggg
gtggtagagtacatcgatactctggaagaagagacagtgatgcttgccatgactccggat
gacttacaggagaaggaagtagcttactgctccacgtatacgcactgtgagattcacccg
tccatgatcctcggggtctgtgcgtctattattccttttcctgatcataaccagtccccc
aggaacacgtaccagtctgctatgggaaagcaggccatgggggtctatatcaccaacttc
cacgtccgcatggacacgctggcccatgtcctctactaccctcaaaaaccactcgtgacc
acacgctctatggagtatctgcggttccgagagctgccagcaggtattaactccattgtg
gccatcgcctcctacactgggtacaaccaggaggactctgtcatcatgaatcgttcagct
gtagaccgaggctttttccggtctgttttctatcgctcctataaagaacaggaatctaaa
aaaggatttgaccaagaagaagtttttgagaaacctacacgtgaaacatgccagggcatg
aggcatgccatttatgacaagctggatgatgatggcttgatagctccaggggttcgtgtg
tctggagatgatgttatcataggcaaaacggtcactttgcctgagaatgaagatgaactg
gagagcactaaccgacgctacaccaagagagactgtagcacttttctccggaccagcgag
acaggcattgtggatcaggttatggtaactctcaaccaggaaggatacaaattttgtaaa
ataagggtacgctctgtaagaatcccacagattggagataagtttgctagtcggcacggt
cagaaagggacatgtggtattcagtaccggcaagaggatatgccttttacctgtgaaggt
atcactcctgatatcatcataaacccccatgccatcccttctcgtatgactattggtcac
ttgatcgaatgtcttcaagggaaggtctcggctaacaagggtgaaattggtgatgccacc
ccatttaatgatgctgttaatgtgcagaagatctctaatcttctgtctgactatggctac
catctcagaggaaatgaggtcctctacaatgggtttactggtcgaaaaatcacatcacag
atttttattggccccacctattaccagcgtctaaagcatatggtggatgataaaattcat
tctcgagccaggggacctattcagatccttaatcgacagcctatggagggcagatctcga
gatggtggcctgcgttttggagaaatggaacgagactgtcagattgcccatggagcagca
cagtttttaagagaaaggctgtttgaggcatcagatccctaccaggttcacgtctgcaac
ctctgtggaatcatggcaattgctaacaccaggactcacacatatgaatgcaggggctgc
cgcaacaaaactcagatttctttggtgcgaatgccttacgcatgcaagctgttgtttcag
gaacttatgtctatgagcattgcacctcgaatgatgagtgtctaa
DBGET
integrated database retrieval system
