Cavia porcellus (domestic guinea pig): 100731134
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Entry
100731134 CDS
T07777
Name
(RefSeq) LOW QUALITY PROTEIN: TATA box-binding protein-associated factor RNA polymerase I subunit B-like
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpoc03021
]
100731134
Transcription machinery [BR:
cpoc03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
100731134
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Zn_ribbon_RRN7
Rrn7_cyclin_N
Motif
Other DBs
NCBI-GeneID:
100731134
NCBI-ProteinID:
XP_013010344
LinkDB
All DBs
Position
Unknown
AA seq
584 aa
AA seq
DB search
MELEDAKELKERCAQCAAVSWGLTDEGKYYCTSCHNVTERSKEVTNTDVIPNTKIKSISR
GLKRRSKLEKGWDWYVCEGFQHILCQQAEALKALGVTPELKDEVLHNFWKRYLQKSKQAY
CANPVYSRRKTEETPCHSDGVSGPELLSDINWTSGLDSGAESQSDAPGPKPFAALRTPHS
EAASVCSGSLDGVEYSERKEKGVVKMTVPRTLALCYLSXLWQREAVTLSDLLRFVEEDHI
PYIKAFQNFPEEMKLYGRDKGIFAIESWPDYEEIYKYTVEIATFLDLPRFPDITKDCFLH
PNILCVKYLMEANLPDEMHGLIRQVTEMTGWGEVDSLTFDPIAKAATTVKYDVLAVALIV
VVLKLLFLLDDSVEWSLSDLAEVNNEKNKTGKPWFSFRKWYHVMKRTLEEQRRKWEDARA
KYMWKSEKPLYHSHIDKPVAYKRREVVVNLQKQFSTLLDPAPTVTKKSAASFQLSWAEGD
PGRPCFHSHSLGGVLLKKGQALVTKNSLYWLSTQKFCRSYCKHVTTYEESNFSLSYQFLL
NLFAFLLRVKAALLHDEVSLIEKKLFKKKYNEAKKNPRSRKGRR
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggagctggaggacgcgaaagagttaaaagaacgctgcgctcagtgtgctgctgtctct
tggggtctcactgatgaaggcaaatattactgtacttcctgccacaatgttacagaaaga
tctaaggaagttaccaacactgatgttattcctaacaccaagataaaatccatcagcagg
ggcctcaaaaggagaagcaagttggagaaaggctgggattggtacgtgtgcgaaggcttt
cagcatatactgtgtcaacaagcagaagccctgaaggccctcggagtgaccccagaatta
aaggatgaagtgttacacaatttttggaagcgttacctgcagaagagtaagcaggcatat
tgtgcaaacccagtctacagcagaaggaagactgaggaaacgccctgtcattcagatggg
gtgagtgggcccgagctgctcagcgacataaactggacatctggcctcgacagtggagca
gagtcacaatctgacgccccagggccaaagccctttgctgccctgagaacaccgcactca
gaagcagcctctgtctgttccgggtccctggatggcgtggagtactcggagcggaaggag
aaaggtgtcgtgaagatgacggtacccaggacactcgccctctgctacttgtcctaactg
tggcagagagaagcagtgactctctcagatctgctgagatttgtcgaagaggatcatatt
ccttacataaaggcttttcagaatttcccagaagagatgaaattgtatggacgtgacaaa
ggaatctttgctatagagtcttggccggactatgaggaaatctataaatacactgttgaa
atcgccacgttcttagatttgccccgttttccggacatcactaaggactgcttcctgcac
cccaacatcctgtgtgtgaaatacctgatggaagccaacctccctgatgaaatgcacgga
ttaatccgccaggtgacagagatgaccggctggggagaggtggactccctgacctttgac
cccatcgcgaaagctgccacaactgtgaagtatgacgtgctggctgtggctctcatcgtg
gtggtcttaaagctgctcttcctactggacgacagcgtagagtggtctttgtctgatctc
gctgaagtcaacaatgaaaagaacaaaacagggaagccatggttcagtttcaggaagtgg
taccacgtcatgaagaggacactggaggagcagaggcggaagtgggaggacgcacgcgcc
aagtacatgtggaagagcgaaaagccactctaccactcccacattgacaagcctgtggcc
tacaagaggagggaagtggtggttaatctgcagaagcagttcagcaccctgctggatcca
gccccaaccgtgacgaagaaaagcgctgcgagtttccagctcagctgggccgaaggcgac
cccggccggccctgtttccacagccacagtcttgggggtgtcctgctaaaaaaaggccag
gcactggtgaccaagaactccttatactggctgagcacccagaaattctgcagaagctac
tgcaaacacgtgaccacctacgaagagtccaatttctccctgagctatcagtttctacta
aacctcttcgccttcctgctgcgagtaaaggctgccctcctccacgacgaagtgagccta
attgaaaaaaagctttttaaaaagaaatacaatgaagccaaaaagaacccaagatccagg
aaaggaagaagatag
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